Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a22r
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-9|CAI58660.1|  807|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z46381-8|CAA86517.2|  808|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U41009-10|AAA82284.2|  313|Caenorhabditis elegans Serpentine rec...    30   1.8  
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p...    29   4.2  
U97003-4|AAB52268.2|  370|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z46381-9|CAI58660.1|  807|Caenorhabditis elegans Hypothetical
           protein M01F1.4b protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = +2

Query: 266 LKFASYVQTKKHLINF*STFYGNSFYTVSRLDTFVIFLRPPLIYTIIYIIFFKVNYLVFF 445
           LK  SY +T  ++I++    YG        LD+F++F   P +  +I + F      ++ 
Sbjct: 128 LKILSYERTFMYIISWMGRLYGY-------LDSFIVFFARPWVLPLIIVYFCCYAAWIYV 180

Query: 446 GNYTTFTKRVDRYKQFTLP 502
            N     K++ R   F+LP
Sbjct: 181 QNPKEINKKLAR--SFSLP 197


>Z46381-8|CAA86517.2|  808|Caenorhabditis elegans Hypothetical
           protein M01F1.4a protein.
          Length = 808

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = +2

Query: 266 LKFASYVQTKKHLINF*STFYGNSFYTVSRLDTFVIFLRPPLIYTIIYIIFFKVNYLVFF 445
           LK  SY +T  ++I++    YG        LD+F++F   P +  +I + F      ++ 
Sbjct: 129 LKILSYERTFMYIISWMGRLYGY-------LDSFIVFFARPWVLPLIIVYFCCYAAWIYV 181

Query: 446 GNYTTFTKRVDRYKQFTLP 502
            N     K++ R   F+LP
Sbjct: 182 QNPKEINKKLAR--SFSLP 198


>U41009-10|AAA82284.2|  313|Caenorhabditis elegans Serpentine
           receptor, class v protein17 protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 254 PTYILKFASYVQTKKHLINF*STFYGNSF-YTVSRLDTFVIFLRPPLIYTIIYIIFFKVN 430
           P Y L     V+ ++H++ F +TFY     +++  +   + +    L Y +I  + FK  
Sbjct: 19  PVYFLILICIVKIRRHIVMFRTTFYSLLIQHSIGDILAMIFYCAQKLSYVLIPNVLFKYQ 78

Query: 431 Y 433
           +
Sbjct: 79  H 79


>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
            protein C56C10.12 protein.
          Length = 1599

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 263  ILKFASYVQTKKHLINF*STFYGNSFYTVSRLDTFVI 373
            I  FASYV  +    +F +TFYG+ F T+++ D + +
Sbjct: 1117 ISPFASYVMLRVEQKSF-NTFYGHFFETLTKKDKYTL 1152


>U97003-4|AAB52268.2|  370|Caenorhabditis elegans Hypothetical
           protein F47C10.3 protein.
          Length = 370

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 563 INYNSKYWNNGYSPLCLYVEKNIIVSGCNPIR 658
           I YN KYWN  Y     YV+ N + + C   R
Sbjct: 64  ITYNCKYWNTCYDGQ-EYVDANNVSTRCRACR 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,884,436
Number of Sequences: 27780
Number of extensions: 264689
Number of successful extensions: 567
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)