Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a22f
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119160-1|AAM51020.1|  152|Drosophila melanogaster RH09920p pro...   144   8e-35
AY071001-1|AAL48623.1|  152|Drosophila melanogaster RE08888p pro...   144   8e-35
AE014296-824|AAF47883.1|  158|Drosophila melanogaster CG1319-PA ...   141   6e-34
AY113620-1|AAM29625.1|  172|Drosophila melanogaster RH67819p pro...    84   1e-16
AE014296-1623|AAF50293.2|  172|Drosophila melanogaster CG4205-PA...    84   1e-16
X06542-2|CAB55551.1|   95|Drosophila melanogaster Ferredoxin pro...    62   8e-10
BT016094-1|AAV36979.1|  796|Drosophila melanogaster LD37577p pro...    28   8.6  
AF184975-1|AAF23615.1|  990|Drosophila melanogaster SPIRE long f...    28   8.6  
AE014296-2658|AAN11764.1|  351|Drosophila melanogaster CG13073-P...    28   8.6  
AE014134-3226|AAN11070.1|  991|Drosophila melanogaster CG10076-P...    28   8.6  

>AY119160-1|AAM51020.1|  152|Drosophila melanogaster RH09920p
           protein.
          Length = 152

 Score =  144 bits (349), Expect = 8e-35
 Identities = 66/106 (62%), Positives = 87/106 (82%), Gaps = 1/106 (0%)
 Frame = +1

Query: 298 FSTSSLALKDEKV-KVCFVLNDGKRLEAEAKIGDTLLDVVVNNDLNIEGYGACEGTLTCS 474
           FST  LALK + V  + FV  +G +++   K+GD+LLDVVVNN+++++G+GACEGTLTCS
Sbjct: 29  FSTG-LALKTKDVVNITFVRANGDKIKTSGKVGDSLLDVVVNNNVDLDGFGACEGTLTCS 87

Query: 475 TCHVILKQEDYDRLPEEPSDEERDMLDLAYGLTDTSRLGCQITLTK 612
           TCH+I K  D+++LP++P DEE DMLDLAY LTDTSRLGCQITL+K
Sbjct: 88  TCHLIFKTSDFEKLPDKPGDEELDMLDLAYELTDTSRLGCQITLSK 133


>AY071001-1|AAL48623.1|  152|Drosophila melanogaster RE08888p
           protein.
          Length = 152

 Score =  144 bits (349), Expect = 8e-35
 Identities = 66/106 (62%), Positives = 87/106 (82%), Gaps = 1/106 (0%)
 Frame = +1

Query: 298 FSTSSLALKDEKV-KVCFVLNDGKRLEAEAKIGDTLLDVVVNNDLNIEGYGACEGTLTCS 474
           FST  LALK + V  + FV  +G +++   K+GD+LLDVVVNN+++++G+GACEGTLTCS
Sbjct: 29  FSTG-LALKTKDVVNITFVRANGDKIKTSGKVGDSLLDVVVNNNVDLDGFGACEGTLTCS 87

Query: 475 TCHVILKQEDYDRLPEEPSDEERDMLDLAYGLTDTSRLGCQITLTK 612
           TCH+I K  D+++LP++P DEE DMLDLAY LTDTSRLGCQITL+K
Sbjct: 88  TCHLIFKTSDFEKLPDKPGDEELDMLDLAYELTDTSRLGCQITLSK 133


>AE014296-824|AAF47883.1|  158|Drosophila melanogaster CG1319-PA
           protein.
          Length = 158

 Score =  141 bits (342), Expect = 6e-34
 Identities = 63/112 (56%), Positives = 89/112 (79%)
 Frame = +1

Query: 277 DSKRIVPFSTSSLALKDEKVKVCFVLNDGKRLEAEAKIGDTLLDVVVNNDLNIEGYGACE 456
           +++R V   ++  AL  + V + FV  +G +++   K+GD+LLDVVVNN+++++G+GACE
Sbjct: 30  ENERCVSIFSTPRAL--QCVNITFVRANGDKIKTSGKVGDSLLDVVVNNNVDLDGFGACE 87

Query: 457 GTLTCSTCHVILKQEDYDRLPEEPSDEERDMLDLAYGLTDTSRLGCQITLTK 612
           GTLTCSTCH+I K  D+++LP++P DEE DMLDLAY LTDTSRLGCQITL+K
Sbjct: 88  GTLTCSTCHLIFKTSDFEKLPDKPGDEELDMLDLAYELTDTSRLGCQITLSK 139


>AY113620-1|AAM29625.1|  172|Drosophila melanogaster RH67819p
           protein.
          Length = 172

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 42/96 (43%), Positives = 62/96 (64%)
 Frame = +1

Query: 325 DEKVKVCFVLNDGKRLEAEAKIGDTLLDVVVNNDLNIEGYGACEGTLTCSTCHVILKQED 504
           DE V + +V  DGKR + + K+GD +L +   + + +EG  ACE +L C+TCHV + Q D
Sbjct: 54  DEIVNITYVDKDGKRTKVQGKVGDNVLYLAHRHGIEMEG--ACEASLACTTCHVYV-QHD 110

Query: 505 YDRLPEEPSDEERDMLDLAYGLTDTSRLGCQITLTK 612
           Y +  +E  ++E D+LD+A  L + SRLGCQI L K
Sbjct: 111 YLQKLKEAEEQEDDLLDMAPFLRENSRLGCQILLDK 146


>AE014296-1623|AAF50293.2|  172|Drosophila melanogaster CG4205-PA
           protein.
          Length = 172

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 42/96 (43%), Positives = 62/96 (64%)
 Frame = +1

Query: 325 DEKVKVCFVLNDGKRLEAEAKIGDTLLDVVVNNDLNIEGYGACEGTLTCSTCHVILKQED 504
           DE V + +V  DGKR + + K+GD +L +   + + +EG  ACE +L C+TCHV + Q D
Sbjct: 54  DEIVNITYVDKDGKRTKVQGKVGDNVLYLAHRHGIEMEG--ACEASLACTTCHVYV-QHD 110

Query: 505 YDRLPEEPSDEERDMLDLAYGLTDTSRLGCQITLTK 612
           Y +  +E  ++E D+LD+A  L + SRLGCQI L K
Sbjct: 111 YLQKLKEAEEQEDDLLDMAPFLRENSRLGCQILLDK 146


>X06542-2|CAB55551.1|   95|Drosophila melanogaster Ferredoxin
           protein.
          Length = 95

 Score = 61.7 bits (143), Expect = 8e-10
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = +1

Query: 445 GACEGTLTCSTCHVILKQEDYDRLPEEPSDEERDMLDLAYGLTDTSRLGCQITLTK 612
           GACE +L C+TCHV + Q DY +  +E  ++E D+LD+A  L + SRLGCQI L K
Sbjct: 3   GACEASLACTTCHVYV-QHDYLQKLKEAEEQEDDLLDMAPFLRENSRLGCQILLDK 57


>BT016094-1|AAV36979.1|  796|Drosophila melanogaster LD37577p
           protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = -3

Query: 493 SVSHGKWNRSGYPHRPRSPQYLDRCSRPRPEVYHRSSPLLPTSSHRLARSIL*PFRPLTL 314
           S+S      + + H P   + + RCS+P+   Y     ++P+ + +  R      RP   
Sbjct: 331 SISSSHSTAATHQHHPHFAE-MHRCSQPKMPPYPFGGYMVPSQARQDCRETASLMRPRRT 389

Query: 313 DYSLKTE 293
            Y L T+
Sbjct: 390 TYDLATQ 396


>AF184975-1|AAF23615.1|  990|Drosophila melanogaster SPIRE long form
           protein.
          Length = 990

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = -3

Query: 493 SVSHGKWNRSGYPHRPRSPQYLDRCSRPRPEVYHRSSPLLPTSSHRLARSIL*PFRPLTL 314
           S+S      + + H P   + + RCS+P+   Y     ++P+ + +  R      RP   
Sbjct: 525 SISSSHSTAATHQHHPHFAE-MHRCSQPKMPPYPFGGYMVPSQARQDCRETASLMRPRRT 583

Query: 313 DYSLKTE 293
            Y L T+
Sbjct: 584 TYDLATQ 590


>AE014296-2658|AAN11764.1|  351|Drosophila melanogaster CG13073-PB,
           isoform B protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = -3

Query: 523 PPVIYHNPPASVSH----GKWNRSGYPHRPRSPQYLDRCSRPR 407
           PP     PP S SH      W+R  + HRPR  Q+  R  R R
Sbjct: 157 PPRSPFCPPCSYSHLHHRRHWHRHRHRHRPRHSQHHQRHYRHR 199


>AE014134-3226|AAN11070.1|  991|Drosophila melanogaster CG10076-PB,
           isoform B protein.
          Length = 991

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = -3

Query: 493 SVSHGKWNRSGYPHRPRSPQYLDRCSRPRPEVYHRSSPLLPTSSHRLARSIL*PFRPLTL 314
           S+S      + + H P   + + RCS+P+   Y     ++P+ + +  R      RP   
Sbjct: 526 SISSSHSTAATHQHHPHFAE-MHRCSQPKMPPYPFGGYMVPSQARQDCRETASLMRPRRT 584

Query: 313 DYSLKTE 293
            Y L T+
Sbjct: 585 TYDLATQ 591


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,113,386
Number of Sequences: 53049
Number of extensions: 586220
Number of successful extensions: 1776
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1770
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)