Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a18f
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 109 2e-24
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 90 1e-18
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 89 3e-18
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 82 3e-16
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 69 2e-12
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 62 4e-10
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 56 2e-08
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 56 2e-08
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 46 2e-05
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 42 5e-04
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 42 5e-04
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 40 0.001
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 40 0.002
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 38 0.008
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_48315| Best HMM Match : GASA (HMM E-Value=1.8) 31 0.96
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 30 1.3
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 109 bits (262), Expect = 2e-24
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 14/151 (9%)
Frame = +3
Query: 192 KIKMSTPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLT 368
K+ +S+ A R L + K+L E+P G + P ++N W+ IFGP T + G FK
Sbjct: 1119 KLDLSS-AVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAH 1177
Query: 369 IEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------QNRWSPTYDVS 509
+ F +YP PPT RF++KM+HPN+Y G +C+ IL RW+PT +V
Sbjct: 1178 MSFPHDYPYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQSGELPSERWNPTQNVR 1237
Query: 510 AILTSIQSLLSDPNPNSPANSMAAQLYKENR 602
IL S+ SLL++PN SPAN A+ ++++ R
Sbjct: 1238 TILLSVISLLNEPNTFSPANVDASVMFRKWR 1268
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 14/126 (11%)
Frame = +3
Query: 246 LQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 422
LQ+ P G S G D ++ W ++ GP T +E+G FK ++ F +EYP +PPT+ F+S
Sbjct: 344 LQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFIS 403
Query: 423 KMFHPNVYADGGICLDIL-------------QNRWSPTYDVSAILTSIQSLLSDPNPNSP 563
++HPNV+ +G +C+ IL RW P + V I+ S+ S+L++PN SP
Sbjct: 404 DIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESP 463
Query: 564 ANSMAA 581
AN AA
Sbjct: 464 ANVDAA 469
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 89.8 bits (213), Expect = 1e-18
Identities = 49/135 (36%), Positives = 68/135 (50%)
Frame = +3
Query: 198 KMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 377
K + A +R+ R+ + DPP S P +++ W + I GP + +E G F L I F
Sbjct: 91 KNQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHF 150
Query: 378 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPN 557
+YP KPP G +CLDIL++ WSP +S +L SI SLL+D NP
Sbjct: 151 PSDYPFKPPK---------------GMVCLDILKDSWSPALTISKVLLSICSLLTDCNPA 195
Query: 558 SPANSMAAQLYKENR 602
P A LY +NR
Sbjct: 196 DPLVGSIAALYVQNR 210
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 89.0 bits (211), Expect = 3e-18
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Frame = +3
Query: 318 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL----QNR 485
+ G TP+ G FKL I+ E YP +PP VRFV+ ++HPN+ + G ICLD L +
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGM 61
Query: 486 WSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENR 602
W P ++S++L++I L+++PNP+ P + + +K N+
Sbjct: 62 WKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNK 100
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +3
Query: 288 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 467
++NI+ W +I P P+ G F++ I F EYP KPP + F +K++HPN+ G +CL
Sbjct: 20 ESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCL 78
Query: 468 DILQ-NRWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRR 605
I+ W P ++ ++ +L+ DP P P + A+ Y ++++
Sbjct: 79 PIISPENWKPATKTEQVIQALLALVHDPEPEHPLRADLAEEYSKDKK 125
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Frame = +3
Query: 222 RLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 401
R+ R+ + L EDPP G S P D N + TPFE P
Sbjct: 6 RMKRELRLLAEDPPHGASCWPVDEN-----RIDKLEASTPFE-----------------P 43
Query: 402 PTVRFVSKMFHPNVYADGGICLDIL----QNRWSPTYDVSAILTSIQSLLSDPNPNSPAN 569
P VRFV+ ++HPN+ + G ICLD L + W P ++S++L++I L+++PNP+ P
Sbjct: 44 PKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPDDPLM 103
Query: 570 SMAAQLYKENR 602
+ + +K N+
Sbjct: 104 AEISNEFKYNK 114
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 327 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTYD 503
P D + G FK +++ TE+YPN PP R V+ ++HPN+ DG +CL +L + W+ + D
Sbjct: 45 PTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLLDD-WNESND 102
Query: 504 VSAILTSIQSLLSDPNPNSPANSM 575
+ ++ + L +PN P + +
Sbjct: 103 LEDLVQGLLFLFYNPNLEDPLSPL 126
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Frame = +3
Query: 282 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK-----MFHPNVY 446
P ++I +A+I GP DTP+E G F I +YP +PP V+ ++ F+PN+Y
Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLY 64
Query: 447 ADGGICL----DILQNRWSPTYDVSAILTSIQSLLSDPNPNSP 563
+G +CL D+++ + YD + + +S L+ N P
Sbjct: 65 RNGKVCLSIIGDVMEKSFPEFYDYYISVITEKSYLNGQNMQDP 107
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +3
Query: 414 FVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYK 593
F++K+FHPNV +G IC++ L+ W P + +L +++ LL PNP S N A +L
Sbjct: 147 FLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLL 206
Query: 594 E 596
E
Sbjct: 207 E 207
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/83 (28%), Positives = 46/83 (55%)
Frame = +3
Query: 327 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDV 506
P D + G FK ++ T +YPN P++ +K++HPN+ G+C+ +L + W + D+
Sbjct: 45 PTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMSLLDD-WQASNDL 102
Query: 507 SAILTSIQSLLSDPNPNSPANSM 575
++ + L +PN P +S+
Sbjct: 103 EDLVQGLLFLFYNPNLEDPLSSL 125
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 56.0 bits (129), Expect = 2e-08
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
+ +PA +RLMR+ K L+ P ++N+ W+ + GP DT F G + I
Sbjct: 7 LRSPAVKRLMREAKELRNATEL-YHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILP 65
Query: 381 EEYPNKPPTVRFVSKMFHPNVYADGG--ICLDILQNR---WSPTYDVSAILTSIQSLLSD 545
EYP KPP++ ++ PN + G ICL + + W P++ + +L +I +
Sbjct: 66 PEYPMKPPSIMLLT----PNGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAIIGFM-- 119
Query: 546 PNPNSPANSMAAQLYKENRR 605
P A ++ A Y R
Sbjct: 120 --PTKGAGAIGALDYTPKER 137
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +3
Query: 198 KMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 377
K + A +R+ R+ + DPP S P +++ W + I GP + +E G F L I F
Sbjct: 131 KNQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHF 190
Query: 378 TEEYPNKPP 404
+YP KPP
Sbjct: 191 PSDYPFKPP 199
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +3
Query: 303 IWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK---MFHPNVYADGGICL 467
I+ +I GP TP++ G F I YP+ PP+ ++S +PN+Y DG +C+
Sbjct: 635 IFRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCI 692
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNA---VIFGP---HDTPFEDGT--FKLTIE 374
+RLM++F+ + S D+N+ WN I G + E G+ L I
Sbjct: 737 KRLMKEFQDVSRKTERIFSAELVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNIT 796
Query: 375 FTEEYPNKPPTVRFVSKMFHPNVYADGG-ICLDILQNR-WSPTYDVSAIL 518
F E +P PP +R ++ DGG IC+++L + WS Y V A++
Sbjct: 797 FPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELLTPKGWSSAYTVEAVV 846
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 483 RWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKEN 599
+WSP + +L SIQ+LLS PNP+ P + A+ +K N
Sbjct: 2 KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKVN 40
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 273 SGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 410
S P + + W + I GP + +E G F L I F +YP KPP V
Sbjct: 43 SAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 288 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 422
+N + A++ GP DTP+ G F I F YPN PP V+ ++
Sbjct: 2 ENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 363 LTIEFTEEYPNKPPTVRFVSKMFHPN-VYADGGICLDILQNR-WSPTYDVSAILTSIQSL 536
L + FT+++P PP VR + V + G IC+++L + WS Y + A++ I +
Sbjct: 575 LNMTFTDKFPFDPPFVRVCYPVIQAGYVLSGGAICMELLTPQGWSSAYTIEAVIVQISAT 634
Query: 537 L 539
L
Sbjct: 635 L 635
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +3
Query: 255 DPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPP 404
D +G+ D I GP +TPFE GT+ L I E YP PP
Sbjct: 672 DQKSGIKVELVDETFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPP 721
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 291 NNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 422
+N+ W+ + GP DT F G + I EYP KPP++ ++
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 321 FGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 410
FGP TP+E G +K+ ++ E+YP K P++
Sbjct: 55 FGPVGTPYEGGVWKVRVDLPEKYPFKSPSI 84
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 336 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 455
T FE+ + L I YP KPPTV+FVSK+ V + G
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 336 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 455
T FE+ + L I YP KPPTV+FVSK+ V + G
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 31.5 bits (68), Expect = 0.55
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 357 FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 455
F+ E +P+ P V+F S +FHP ++ +G
Sbjct: 108 FREQFILAEYFPDSRPLVKFTSNVFHPQIHENG 140
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 31.1 bits (67), Expect = 0.72
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 264 TGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY-PNKP 401
T SGA TD I FG TPFE+G L ++F +++ P P
Sbjct: 1420 TNPSGAHTDTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSP 1466
>SB_48315| Best HMM Match : GASA (HMM E-Value=1.8)
Length = 340
Score = 30.7 bits (66), Expect = 0.96
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 265 QVCQELQLITIL*SGML*YLALMILHLKMEHSNSQ*NLQKNIQINPQQYDLYQKCFIQMF 444
+V +L++I + +L L +IL L + + ++ LQK Q+N Q+Y + +C I+
Sbjct: 251 KVVSKLKIIVTI--ALLLILITIILILAVVLAQTKAKLQKGNQMNQQKYPVKLRCVIRAT 308
Query: 445 TP 450
TP
Sbjct: 309 TP 310
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 516 LTSIQSLLSDPNPNSPANSMAAQLYKENR 602
L SI SLL DPNP+ P A++YK ++
Sbjct: 2 LLSICSLLCDPNPDDPLVPDIARIYKTDK 30
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 363 LTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSI 527
+T+ TE+ +KP T RF++K+ ++ A L I +RW P +A L+S+
Sbjct: 535 MTVMSTEQMLSKPLTKRFLAKVIKASLAATTAAQLYIKASRW-PGRSSAAPLSSL 588
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,486,288
Number of Sequences: 59808
Number of extensions: 433532
Number of successful extensions: 2617
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2608
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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