Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a18f
(607 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 249 1e-66
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 249 1e-66
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 248 3e-66
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 238 2e-63
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 143 7e-35
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 142 2e-34
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 142 2e-34
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 141 4e-34
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 141 4e-34
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 140 5e-34
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 140 7e-34
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 140 7e-34
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 140 9e-34
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 140 9e-34
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 136 8e-33
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 136 1e-32
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 136 1e-32
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 131 4e-31
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 130 5e-31
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 126 9e-30
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 123 8e-29
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 113 9e-26
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 113 1e-25
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 113 1e-25
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 111 3e-25
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 110 6e-25
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 107 6e-24
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 107 6e-24
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 107 7e-24
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 106 1e-23
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 103 9e-23
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 101 4e-22
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 100 9e-22
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 97 6e-21
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 97 8e-21
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 94 7e-20
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 91 7e-19
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 90 9e-19
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 89 2e-18
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 88 4e-18
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 88 5e-18
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 84 8e-17
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 77 9e-15
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 71 5e-13
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 71 6e-13
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 69 2e-12
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 65 3e-11
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 64 9e-11
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 61 5e-10
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 55 4e-08
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 52 3e-07
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 51 7e-07
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 49 2e-06
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 48 4e-06
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 47 1e-05
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 46 3e-05
At3g60650.1 68416.m06786 expressed protein 32 0.26
At5g66750.1 68418.m08414 SNF2 domain-containing protein / helica... 29 1.8
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 5.5
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 27 7.3
At1g52310.1 68414.m05902 protein kinase family protein / C-type ... 27 7.3
At5g31685.1 68418.m03766 expressed protein ; expression supporte... 27 9.6
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 249 bits (610), Expect = 1e-66
Identities = 107/135 (79%), Positives = 126/135 (93%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKL+++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 381 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 560
E+YPNKPPTVRFVS+MFHPN+YADG ICLDILQN+WSP YDV+AILTSIQSLL DPNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 561 PANSMAAQLYKENRR 605
PANS AA++Y E++R
Sbjct: 121 PANSEAARMYSESKR 135
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 249 bits (610), Expect = 1e-66
Identities = 107/135 (79%), Positives = 126/135 (93%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKL+++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 381 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 560
E+YPNKPPTVRFVS+MFHPN+YADG ICLDILQN+WSP YDV+AILTSIQSLL DPNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 561 PANSMAAQLYKENRR 605
PANS AA++Y E++R
Sbjct: 121 PANSEAARMYSESKR 135
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 248 bits (606), Expect = 3e-66
Identities = 106/135 (78%), Positives = 126/135 (93%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKL+++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 381 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 560
E+YPNKPPTVRFVS+MFHPN+YADG ICLDILQN+WSP YDV+AILTSIQSLL DPNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 561 PANSMAAQLYKENRR 605
PANS AA+++ E++R
Sbjct: 121 PANSEAARMFSESKR 135
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 238 bits (582), Expect = 2e-63
Identities = 102/135 (75%), Positives = 122/135 (90%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
M+TPA++RLM DFKRLQ+DPP G+SGAP DNNIM WNA+IFGP DTP++ GTFKLT+ FT
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 381 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 560
E+YPNKPP VRFVS+MFHPN+YADG ICLDILQN+WSP YDV+A+LTSIQSLL DPNP+S
Sbjct: 61 EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120
Query: 561 PANSMAAQLYKENRR 605
PAN+ AA+L+ EN+R
Sbjct: 121 PANAEAARLFSENKR 135
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 143 bits (347), Expect = 7e-35
Identities = 62/130 (47%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K+FHPNV ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK +R
Sbjct: 122 EIAHMYKTDR 131
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 142 bits (343), Expect = 2e-34
Identities = 60/130 (46%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K+FHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 92 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151
Query: 573 MAAQLYKENR 602
A +YK ++
Sbjct: 152 EIAHMYKTDK 161
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 142 bits (343), Expect = 2e-34
Identities = 60/130 (46%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K+FHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK ++
Sbjct: 122 EIAHMYKTDK 131
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 141 bits (341), Expect = 4e-34
Identities = 60/130 (46%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K+FHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK +R
Sbjct: 122 EIAHMYKTDR 131
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 141 bits (341), Expect = 4e-34
Identities = 60/130 (46%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K+FHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK +R
Sbjct: 122 EIAHMYKTDR 131
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 140 bits (340), Expect = 5e-34
Identities = 59/130 (45%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A RR++++ K LQ DPP S PT ++ W A I GP+++P+ G F + I F +YP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K+FHPN+ ++G ICLDIL+++WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK ++
Sbjct: 122 EIAHIYKTDK 131
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 140 bits (339), Expect = 7e-34
Identities = 61/130 (46%), Positives = 85/130 (65%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R+ ++ + LQ DPP S PT +++ W A I GP D+PF G F +TI F +YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K++HPN+ ++G ICLDIL+ +WSP VS +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK +R
Sbjct: 122 EIAHIYKTDR 131
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 140 bits (339), Expect = 7e-34
Identities = 61/130 (46%), Positives = 85/130 (65%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R+ ++ + LQ DPP S PT +++ W A I GP D+PF G F +TI F +YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K++HPN+ ++G ICLDIL+ +WSP VS +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK +R
Sbjct: 122 EIAHIYKTDR 131
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 140 bits (338), Expect = 9e-34
Identities = 59/130 (45%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K+FHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK ++
Sbjct: 122 EIAHMYKTDK 131
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 140 bits (338), Expect = 9e-34
Identities = 59/130 (45%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K+FHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK ++
Sbjct: 122 EIAHMYKTDK 131
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 136 bits (330), Expect = 8e-33
Identities = 57/130 (43%), Positives = 86/130 (66%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPP+ S P ++ W A I GP ++P+ G F ++I F +YP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 572
KPP V F +K++HPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 573 MAAQLYKENR 602
A +YK +R
Sbjct: 122 EIAHMYKTDR 131
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 136 bits (329), Expect = 1e-32
Identities = 59/131 (45%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPT-DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 389
A +R+ R+ + +Q PP S P + +I W A I GPHD+P+ G F ++I+F+ +Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 390 PNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPAN 569
P KPP V F +K++HPN+ + G ICLDIL+ +WSP S +L SI SLL+DPNPN P
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLV 121
Query: 570 SMAAQLYKENR 602
A LYK ++
Sbjct: 122 PEIAHLYKVDK 132
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 136 bits (328), Expect = 1e-32
Identities = 59/131 (45%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTG-VSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 389
A +R++++ K LQ+DPPT + P ++ W A I GP ++P+ G F +TI F +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 390 PNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPAN 569
P KPP V F +K+FHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
Query: 570 SMAAQLYKENR 602
A +YK +R
Sbjct: 122 PEIAHMYKTDR 132
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 131 bits (316), Expect = 4e-31
Identities = 55/127 (43%), Positives = 87/127 (68%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
RR++++ +RL +P G+S +P+++N+ +N +I GP +P+E G FKL + EEYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 399 PPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMA 578
P VRF++K++HPN+ G ICLDIL+++WSP + +L SIQ+LLS PNP+ P +
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 579 AQLYKEN 599
A+ +K N
Sbjct: 128 AKHWKSN 134
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 130 bits (315), Expect = 5e-31
Identities = 55/127 (43%), Positives = 86/127 (67%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
RR++++ +RL +P G+S +P++ N+ +N +I GP +P+E G FKL + EEYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 399 PPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMA 578
P VRF++K++HPN+ G ICLDIL+++WSP + +L SIQ+LLS PNP+ P +
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 579 AQLYKEN 599
A+ +K N
Sbjct: 128 AKHWKSN 134
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 126 bits (305), Expect = 9e-30
Identities = 59/124 (47%), Positives = 78/124 (62%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+RL + L G+S P ++NI W I G DT FE ++L++ F+ +YP K
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFK 97
Query: 399 PPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMA 578
PP V+F + FHPNV G ICLDILQ++WS YDV IL SIQSLL +PN +SP N+ A
Sbjct: 98 PPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
Query: 579 AQLY 590
AQL+
Sbjct: 158 AQLW 161
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 123 bits (297), Expect = 8e-29
Identities = 58/124 (46%), Positives = 77/124 (62%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+RL + L G+S P ++NI W I G DT FE ++L++ F+ +YP K
Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFK 98
Query: 399 PPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMA 578
P V+F + FHPNV G ICLDILQ++WS YDV IL SIQSLL +PN +SP N+ A
Sbjct: 99 SPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQA 158
Query: 579 AQLY 590
AQL+
Sbjct: 159 AQLW 162
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 113 bits (272), Expect = 9e-26
Identities = 46/106 (43%), Positives = 68/106 (64%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 393 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQ 530
KPP V F +K+FHPN+ ++G ICLDIL+ +WSP +S + Q
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTLIFQ 107
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 113 bits (271), Expect = 1e-25
Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTG--VSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEE 386
+R RL +++K +Q + + D NI W A+I GP +TP+E G F+L E
Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
Query: 387 YPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSP 563
YP +PP VRF++K+FHPNV + G ICLDIL+N WSP + + ++ +I +L++ P P+SP
Sbjct: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
Query: 564 ANSMAAQLYK 593
N + L +
Sbjct: 124 LNCDSGNLLR 133
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 113 bits (271), Expect = 1e-25
Identities = 61/148 (41%), Positives = 82/148 (55%), Gaps = 14/148 (9%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 377
M++ A L + K L + P G S G + NI W+ I GP DT +E G F + F
Sbjct: 1 MNSQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSF 60
Query: 378 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------QNRWSPTYDVSAIL 518
+ YPN PPTVRF S ++HPNVY DG +C+ IL RW+P + V +I+
Sbjct: 61 PQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIM 120
Query: 519 TSIQSLLSDPNPNSPANSMAAQLYKENR 602
SI S+LS PN SPAN AA+ ++E R
Sbjct: 121 LSIISMLSGPNDESPANVEAAKEWREKR 148
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 111 bits (268), Expect = 3e-25
Identities = 53/135 (39%), Positives = 77/135 (57%)
Frame = +3
Query: 198 KMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 377
KM A +R+ +++ + G NNI W AVI GP TP+E G F L+I+F
Sbjct: 4 KMDKKAAQRIAMEYRAMISKESLFSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKF 62
Query: 378 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPN 557
+YP KPP F + ++HPN+ +G IC++IL+++W+P V +L SI LL PNP+
Sbjct: 63 PTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPD 122
Query: 558 SPANSMAAQLYKENR 602
P QL+K NR
Sbjct: 123 DPLVPEIGQLFKNNR 137
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 110 bits (265), Expect = 6e-25
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 14/140 (10%)
Frame = +3
Query: 225 LMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 401
L + K L + P G S G + N+ W+ I GP DT +E G F + F E YP P
Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSP 69
Query: 402 PTVRFVSKMFHPNVYADGGICLDIL-------------QNRWSPTYDVSAILTSIQSLLS 542
PTV F S+M+HPNVY+DG +C+ IL RW+P + V +I+ SI S+LS
Sbjct: 70 PTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLS 129
Query: 543 DPNPNSPANSMAAQLYKENR 602
PN SPAN AA+ +++NR
Sbjct: 130 GPNDESPANVEAAKEWRDNR 149
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 107 bits (257), Expect = 6e-24
Identities = 58/148 (39%), Positives = 80/148 (54%), Gaps = 17/148 (11%)
Frame = +3
Query: 210 PARRRLMRDFKRLQEDPPTGVSGAPTDN----NIMIWNAVIFGPHDTPFEDGTFKLTIEF 377
P R+L F+ + P +S + NI W+ I GP DT +E G F + F
Sbjct: 33 PWLRKLAFSFRNNSKASPWNLSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTF 92
Query: 378 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------QNRWSPTYDVSAIL 518
+ YPN PPTVRF S M+HPNVY+DG +C+ IL RW+P + V +I+
Sbjct: 93 PQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIM 152
Query: 519 TSIQSLLSDPNPNSPANSMAAQLYKENR 602
SI S+LS PN SPAN AA+ +++ R
Sbjct: 153 LSIISMLSGPNDESPANVEAAKEWRDKR 180
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 107 bits (257), Expect = 6e-24
Identities = 49/128 (38%), Positives = 75/128 (58%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+R+ R+ L DPP S P +N+ W A I GP TP+E G F L I F +YP K
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 399 PPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMA 578
PP + F ++++H NV G + ++IL++ WSP ++ +L +I+S+ P P SPA +
Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVI 158
Query: 579 AQLYKENR 602
A+LY +R
Sbjct: 159 ARLYLTDR 166
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 107 bits (256), Expect = 7e-24
Identities = 46/98 (46%), Positives = 66/98 (67%)
Frame = +3
Query: 306 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNR 485
+N +I GP +P+E G FKL + EEYP P VRF++K++HPN+ G ICLDIL+++
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 63
Query: 486 WSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKEN 599
WSP + +L SIQ+LLS PNP+ P + A+ +K N
Sbjct: 64 WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 101
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 106 bits (254), Expect = 1e-23
Identities = 43/105 (40%), Positives = 70/105 (66%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
RR++++ +RL +P G+S +P+++N+ +N +I GP +P+E G FKL + EEYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 399 PPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQS 533
P VRF++K++HPN+ G ICLDIL+++WSP + +L S
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 103 bits (247), Expect = 9e-23
Identities = 48/125 (38%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Frame = +3
Query: 228 MRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPT 407
++D +R Q+ +G+ P +N+ I GP TP+E GTF++ I + YP +PP
Sbjct: 11 LQDCERNQDS--SGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPK 68
Query: 408 VRFVSKMFHPNVYA-DGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQ 584
++F +K++HPN+ + G ICLDIL+++WSP + L SIQ+LLS P P P +++ A+
Sbjct: 69 MQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAE 128
Query: 585 LYKEN 599
Y +N
Sbjct: 129 QYMKN 133
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 101 bits (242), Expect = 4e-22
Identities = 53/133 (39%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDN-----NIMIWNAVIFGPHDTPFEDGTFKLTIEF 377
AR RL + K +++ P G P N+M+W+ I G T +E G F LT+ F
Sbjct: 6 ARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHF 65
Query: 378 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQN--RWSPTYDVSAILTSIQSLLSDPN 551
+E+YP+KPP +F FHPNVY G +CL IL W P V IL IQ LL PN
Sbjct: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPN 125
Query: 552 PNSPANSMAAQLY 590
P PA + L+
Sbjct: 126 PADPAQTDGYHLF 138
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 100 bits (239), Expect = 9e-22
Identities = 43/127 (33%), Positives = 76/127 (59%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
++L ++ K L E PP G+ D + A I GP TP+E+G F++ + + ++P+
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 399 PPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMA 578
PP F++K+FHPNV ++G IC++ L+ W+P+ + +L+ ++ LL +P P S N A
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQA 132
Query: 579 AQLYKEN 599
++ EN
Sbjct: 133 GKMLLEN 139
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 97.5 bits (232), Expect = 6e-21
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 13/141 (9%)
Frame = +3
Query: 222 RLMRDFKRLQEDPPTGVS---------GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 374
R+ ++ K L DPP G S G+ + +A I GP DT + +G F L I+
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 375 FTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL----QNRWSPTYDVSAILTSIQSLLS 542
E YP +PP V F + ++HPN+ G ICLDIL + W P+ ++S +LTS++ LLS
Sbjct: 70 IPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
Query: 543 DPNPNSPANSMAAQLYKENRR 605
+PNP+ ++ YK NR+
Sbjct: 130 EPNPDDGLMCEVSREYKYNRQ 150
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 97.1 bits (231), Expect = 8e-21
Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGV-SGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 377
+S A RL ++F+ + V S P+ NI W A + GP P+E G F +++
Sbjct: 26 VSKSAENRLWKEFQEKDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHI 85
Query: 378 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPN 557
+YP +PP + F +K+FHPN+ G I +DIL +RWS ++ +L SI S+LS+P
Sbjct: 86 PPKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTINLVLLSICSILSNPVEP 145
Query: 558 SPANSMAAQLYKENRR 605
++ AA+LY+++R+
Sbjct: 146 LLVSNHAARLYQKDRK 161
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 93.9 bits (223), Expect = 7e-20
Identities = 46/136 (33%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
M++P++RR M K + D ++++ ++ GP D+ ++ G +K+ +E
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDT----VNDDLQMFYVTFHGPTDSLYQGGVWKIKVELP 56
Query: 381 EEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTYDVSAILTS-IQSLLSDPNP 554
E YP K P+V FV+K++HPNV + G +CLD++ WSP +D+ + S + LL PNP
Sbjct: 57 EAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNP 116
Query: 555 NSPANSMAAQLYKENR 602
+ P N AA L +R
Sbjct: 117 SDPFNGEAASLLMRDR 132
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 90.6 bits (215), Expect = 7e-19
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
+S A RL ++ Q +PPTG TDN + W + G T + + T++L +EF
Sbjct: 12 LSKIACNRLQKELSEWQLNPPTGFRHKVTDN-LQKWTIDVTGAPGTLYANETYQLQVEFP 70
Query: 381 EEYPNKPPTVRFVSKM-FHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL-SDPNP 554
E YP + P V FVS HP++Y++G ICLDIL + WSP V+++ SI S+L S P
Sbjct: 71 EHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAK 130
Query: 555 NSPANS 572
PA++
Sbjct: 131 QRPADN 136
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 90.2 bits (214), Expect = 9e-19
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
MS+P++RR M K + D + ++ + + GP D+ +E G +K+ +E
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEM----INDGMQEFFVEFSGPKDSIYEGGVWKIRVELP 56
Query: 381 EEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTYD-VSAILTSIQSLLSDPNP 554
+ YP K P+V F++K++HPNV G +CLD++ WSP +D V+ T + LL PNP
Sbjct: 57 DAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNP 116
Query: 555 NSPANSMAAQLYKENR 602
+ P N AA L +R
Sbjct: 117 SDPLNGEAAALMMRDR 132
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 89.4 bits (212), Expect = 2e-18
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
MS+P++RR M K + D + +N GP D+ ++ G +K+ +E
Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFN----GPKDSLYQGGVWKIRVELP 56
Query: 381 EEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTYD-VSAILTSIQSLLSDPNP 554
+ YP K P+V F++K++HPNV G +CLD++ WSP +D V+ T + LL PNP
Sbjct: 57 DAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNP 116
Query: 555 NSPANSMAAQLYKENR 602
+ P N AA L +R
Sbjct: 117 SDPLNGEAAALMMRDR 132
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 88.2 bits (209), Expect = 4e-18
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
+S A RL ++ Q +PPTG TDN + W + G T + + T+ L +EF
Sbjct: 12 LSKIACNRLQKELSEWQVNPPTGFKHRVTDN-LQKWVIEVTGAPGTLYANETYNLQVEFP 70
Query: 381 EEYPNKPPTVRFVSKM-FHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL-SDPNP 554
+ YP + P V FV HP++Y++G ICLDIL + WSP VS++ SI S+L S P
Sbjct: 71 QHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEK 130
Query: 555 NSPANS 572
P ++
Sbjct: 131 QRPTDN 136
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 87.8 bits (208), Expect = 5e-18
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +3
Query: 201 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 380
+S A RL ++ Q +PPTG TDN + W + G T + + T++L ++F
Sbjct: 12 LSKIATNRLQKELVEWQMNPPTGFKHKVTDN-LQRWIIEVIGAPGTLYANDTYQLQVDFP 70
Query: 381 EEYPNKPPTVRFVSKM-FHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLS 542
E YP + P V F+ HP++Y++G ICLDIL + WSP VS+I SI S+LS
Sbjct: 71 EHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 83.8 bits (198), Expect = 8e-17
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +3
Query: 213 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 392
A RL ++F Q +PP+G +DN + W + G T + + T++L +EF E YP
Sbjct: 16 ATNRLQKEFMEWQTNPPSGFKHRVSDN-LQRWIIEVHGVPGTLYANETYQLQVEFPEHYP 74
Query: 393 NKPPTVRFVSKM-FHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLS 542
+ P V F HP++Y++G ICLD+L + WSP +S+I SI S+LS
Sbjct: 75 MEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLS 125
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 77.0 bits (181), Expect = 9e-15
Identities = 35/135 (25%), Positives = 69/135 (51%)
Frame = +3
Query: 195 IKMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 374
+K + RL +D L +S N++M + I P + + G F + +
Sbjct: 26 VKKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTI-KPDEGYYLSGNFVFSFQ 84
Query: 375 FTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNP 554
+ YP++ P V+ +K++HPN+ +G +CL+IL+ W P +++ ++ + L ++PN
Sbjct: 85 VSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNY 144
Query: 555 NSPANSMAAQLYKEN 599
P N AA + ++N
Sbjct: 145 EDPLNHEAAAVLRDN 159
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 71.3 bits (167), Expect = 5e-13
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+RL ++++ L ++P + V P+ N+I+ W+ V+ G TPF G + I+F EYP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 399 PPTVRFVSKMFHPNVYADGGICL---DILQNRWSPTYDVSAILTSIQSLLSDPNPNS 560
PP + + + ICL D W+P + VS+ILT + S + D +P +
Sbjct: 68 PPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTT 122
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 70.9 bits (166), Expect = 6e-13
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+RL ++++ L ++P + V P+ N+I+ W+ V+ G TPF G + I+F EYP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 399 PPTVRFVSKMFHPNVYADGGICL---DILQNRWSPTYDVSAILTSIQSLLSDPNPNS 560
PP + + + ICL D W+P + VS+ILT + S + D +P +
Sbjct: 68 PPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTT 122
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 68.9 bits (161), Expect = 2e-12
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+++ D+K L+ D P +S ++ + + AVI G TP+ DG F I+F + YP+
Sbjct: 274 KKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 333
Query: 399 PPTVRFVS--KMFHPNVYADGGICLDIL-------QNRWSPTYD-VSAILTSIQSLLSDP 548
PP V + S +PN+Y G +CL +L + +W P + +L SIQ+L+ +
Sbjct: 334 PPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNE 393
Query: 549 NP--NSPANSMAA 581
P N P +A
Sbjct: 394 KPYFNEPGYVQSA 406
Score = 61.3 bits (142), Expect = 5e-10
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Frame = +3
Query: 225 LMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPP 404
+ +++K L ++ P + ++ I + AVI G TP+ DG F I+F + YP+ PP
Sbjct: 610 IQKEWKILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPP 669
Query: 405 TVRFVS--KMFHPNVYADGGICLDIL-------QNRWSPTYD-VSAILTSIQSLLSDPNP 554
V + S +PN+Y G +CL ++ + +W P + +L SIQ+L+ + P
Sbjct: 670 KVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEKP 729
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+++ ++K L ++ P + ++ + + AVI G TP+ DG F I+F + YP+
Sbjct: 920 KKVQDEWKILNQNLPETIFVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 979
Query: 399 PPTVRFVS--KMFHPNVYADGGICLDI 473
PP V + S +PN+Y G + + I
Sbjct: 980 PPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 65.3 bits (152), Expect = 3e-11
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Frame = +3
Query: 210 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 389
PA +R++++ K +Q +P P + NI W I GP DT FE G + I+ +Y
Sbjct: 11 PAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 390 PNKPPTVRFVSKMFHPNVYADGGICLDILQ---NRWSPTYDVSAILTSIQSLLSDPNPNS 560
P KPP+ ++ + + ICL I W P++ V L ++ + + P S
Sbjct: 71 PFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFM----PTS 124
Query: 561 PANSMAAQLYKENRR 605
P ++ + Y ++ R
Sbjct: 125 PNGALGSVDYPKDER 139
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 63.7 bits (148), Expect = 9e-11
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+R+ +++ L++D P + ++ + + AVI G TP+ DG F I F + YP+
Sbjct: 335 KRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPST 394
Query: 399 PPTVRFVS--KMFHPNVYADGGICLDIL-------QNRWSP-TYDVSAILTSIQSLLSDP 548
PP V + S +PN+Y G +CL +L + +W P T + +L SIQ L+ +
Sbjct: 395 PPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQ 454
Query: 549 NP--NSPANSMAA 581
P N P +A
Sbjct: 455 KPYFNEPGYERSA 467
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 61.3 bits (142), Expect = 5e-10
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+++ +D+K LQ + P G+ ++ + + AVI G TP++DG F +YP+
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSV 912
Query: 399 PPTVRFVSK--MFHPNVYADGGICLDIL-------QNRWSP-TYDVSAILTSIQSLLSDP 548
PP+ + S +PN+Y +G +CL +L W P + + +L S+Q L+ +
Sbjct: 913 PPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNS 972
Query: 549 NP 554
P
Sbjct: 973 KP 974
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 219 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+++ +++ L+ + P + + + + A + G TP+ DG F I +YP++
Sbjct: 665 KKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHE 724
Query: 399 PPTVRFVS--KMFHPNVYADGGICLDILQNRWS 491
PP V + S +PN+Y G +CL +L N WS
Sbjct: 725 PPMVHYHSGGMRLNPNLYESGRVCLSLL-NTWS 756
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Frame = +3
Query: 210 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGTFKLTIEF 377
P RL+ + +R ++ G D+ I W I GPH+T E ++L +
Sbjct: 12 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 71
Query: 378 TEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILQNRWSPTYDVSAILTSIQ 530
++YP KPPTVRF S++ V D G+ +L N W Y + ILT ++
Sbjct: 72 DKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLAN-WQRQYTMEDILTQLK 125
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +3
Query: 198 KMSTPARRRLMRDFKRLQEDPPTG-VS-GAPTDNNIMI--WNAVIFGPHDTPFEDGTFKL 365
K+ P RL+ + +R ++ G VS G ++I++ W I GPH+T +E F+L
Sbjct: 7 KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQL 66
Query: 366 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 461
+ ++YP PPTVRF S++ V + G+
Sbjct: 67 KLFCGKDYPESPPTVRFQSRINMACVNPENGV 98
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 49.2 bits (112), Expect = 2e-06
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Frame = +3
Query: 210 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGTFKLTIEF 377
P RL+ + +R ++ G D+ I W I GPH+T E ++L +
Sbjct: 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72
Query: 378 TEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILQNRWSPTYDVSAILTSIQSLLS 542
++YP KPPTVRF S++ V + G+ +L N W Y + IL ++ +S
Sbjct: 73 DKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLAN-WQREYTMEDILVQLKKEMS 130
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 48.4 bits (110), Expect = 4e-06
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Frame = +3
Query: 210 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGT-FKLTIE 374
P RL+ + +R ++ G D+ I W I GPH+ +G ++L +
Sbjct: 12 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLF 71
Query: 375 FTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILQNRWSPTYDVSAILTSIQ 530
++YP KPPTVRF S++ V D G+ +L N W Y + ILT ++
Sbjct: 72 CDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLAN-WQRQYTMEDILTQLK 126
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Frame = +3
Query: 198 KMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNN----IMIWNAVIFGPHDTPFEDGTFKL 365
K+ P RL+ + +R ++ G D+ + W I GP +T +E F+L
Sbjct: 7 KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQL 66
Query: 366 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI---CLDILQNRWSPTYDVSAILTSIQ 530
+ +EYP PPTVRF +++ V + G+ L + W Y + IL ++
Sbjct: 67 KLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLK 124
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Frame = +3
Query: 210 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGT-FKLTIE 374
P RL+ + +R ++ G D+ I W I GPH+ +G ++L +
Sbjct: 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLF 72
Query: 375 FTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILQNRWSPTYDVSAILTSIQSLLS 542
++YP KPPTVRF S++ V + G+ +L N W Y + IL ++ +S
Sbjct: 73 CDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLAN-WQREYTMEDILVQLKKEMS 131
>At3g60650.1 68416.m06786 expressed protein
Length = 107
Score = 32.3 bits (70), Expect = 0.26
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 422 KNVSSKCLRRWWNLPRYPAKQMES 493
K VSSK + R W +P+YP KQ +S
Sbjct: 62 KKVSSKRVSRTWKIPKYPKKQPKS 85
>At5g66750.1 68418.m08414 SNF2 domain-containing protein / helicase
domain-containing protein similar to
proliferation-associated SNF2-like protein [Homo
sapiens] GI:8980660; contains Pfam profiles PF00271:
Helicase conserved C-terminal domain, PF00176: SNF2
family N-terminal domain
Length = 764
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 222 RLMRDFKRLQEDPPTGVSGAPTDNNIM-IWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 398
+L+R+ K L+ D ++G P NN+ +W+ + F D F+ +F+E+ N+
Sbjct: 344 KLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNE 403
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 5.5
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +3
Query: 327 PHDTP-FEDGT-FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLD---ILQNRWS 491
PH+ P F+ GT FK + + YP PPT F++ ++ +YA GI + Q +
Sbjct: 10 PHNPPPFDLGTIFKPS---SNPYP--PPTGPFLNNQYNQQLYAPPGIAAQPSPVNQTQQD 64
Query: 492 PTYDVSAILTSIQSLLSDPNP 554
+ SA Q LS P P
Sbjct: 65 VSSSSSATNLQPQRTLSYPTP 85
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 407 CWGFIWIFFCKFYCEFE 357
CW W F C+FYC F+
Sbjct: 44 CWFQFW-FRCRFYCRFD 59
>At1g52310.1 68414.m05902 protein kinase family protein / C-type
lectin domain-containing protein contains protein kinase
domain, Pfam:PF00069, PF00059 Lectin C-type domain
Length = 552
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 408 VRFVSKMFHPNVYADGGICLD 470
+R +K++HPNV A G C D
Sbjct: 313 IRRAAKLYHPNVVAIKGCCYD 333
>At5g31685.1 68418.m03766 expressed protein ; expression supported
by MPSS
Length = 519
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 152 KSRKISLCYNLGIENQNVNSSKKTPDEGF*TLTRGSTYRC 271
K++K+ N+ + N N P EGF TL G Y C
Sbjct: 147 KNKKVVRFGNVTLRVPNPNERVDDPPEGFLTLYEGFFYLC 186
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,411,565
Number of Sequences: 28952
Number of extensions: 314456
Number of successful extensions: 853
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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