Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a16r
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0077 + 626126-626137,626222-627421                               31   1.1  
01_07_0061 + 40818077-40818241,40818494-40818716,40819015-408192...    28   6.1  

>06_01_0077 + 626126-626137,626222-627421
          Length = 403

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 357 ENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDCGSRI 226
           ENCD+FY C      + S   +L+ +      DWP   D  S +
Sbjct: 171 ENCDEFYYCGILTAPITSPNSHLIISTQSSLFDWPVGSDSWSEL 214


>01_07_0061 +
           40818077-40818241,40818494-40818716,40819015-40819263,
           40819455-40819505,40819611-40819871,40819994-40820046,
           40820234-40820348,40820475-40820696,40821280-40822253
          Length = 770

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 526 VSTLYIMRPVTLLVTRIIQQIWRTNEGYWTTIETFVKSGAVLM 654
           ++ +++M   TLLVT ++  IW+T+   W  +   +  GA L+
Sbjct: 448 IAVVFVMFITTLLVTLVMVMIWKTSL-LWIALFPVIFGGAELI 489


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,910,923
Number of Sequences: 37544
Number of extensions: 306231
Number of successful extensions: 673
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)