Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a16r
         (689 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 33   0.96 
BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open readi...    31   5.1  
AY486332-1|AAS57907.1|  100|Homo sapiens BCL10-associated protei...    31   5.1  
AF387612-1|AAL91353.1|  100|Homo sapiens gm117 form B protein.         31   5.1  
AC105054-1|AAY24113.1|  243|Homo sapiens unknown protein.              31   5.1  
M37884-1|AAA63259.1| 1274|Homo sapiens muscle beta spectrin prot...    30   6.8  
AF465439-1|AAL73492.1| 1028|Homo sapiens beta I spectrin form be...    30   6.8  
AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythro...    30   6.8  

>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 396 CAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPN 292
           C Q+G DS ++  + CDK Y  +  +PV+ S P N
Sbjct: 394 CKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTN 428


>BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open reading
           frame 13 protein.
          Length = 511

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 591 PNLLYNPSNEQCDWPHNVECGDRTIP-ENVEDEDNDN 484
           P   Y PS  + +  H +E    T+P  NV DEDNDN
Sbjct: 419 PECPYGPSCYRKNPQHKIEYRHNTLPVRNVLDEDNDN 455


>AY486332-1|AAS57907.1|  100|Homo sapiens BCL10-associated protein
           variant 2 protein.
          Length = 100

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 591 PNLLYNPSNEQCDWP-HNVECGDRTIPE 511
           P  LYNP N+Q DW  H V+  +  +PE
Sbjct: 69  PAFLYNPLNKQIDWERHVVKAPEELLPE 96


>AF387612-1|AAL91353.1|  100|Homo sapiens gm117 form B protein.
          Length = 100

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 591 PNLLYNPSNEQCDWP-HNVECGDRTIPE 511
           P  LYNP N+Q DW  H V+  +  +PE
Sbjct: 69  PAFLYNPLNKQIDWERHVVKAPEELLPE 96


>AC105054-1|AAY24113.1|  243|Homo sapiens unknown protein.
          Length = 243

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 591 PNLLYNPSNEQCDWPHNVECGDRTIP-ENVEDEDNDN 484
           P   Y PS  + +  H +E    T+P  NV DEDNDN
Sbjct: 151 PECPYGPSCYRKNPQHKIEYRHNTLPVRNVLDEDNDN 187


>M37884-1|AAA63259.1| 1274|Homo sapiens muscle beta spectrin protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -1

Query: 404  LRCVLKLVQIVF*LPTK-IVINFTYAGTTSL*FS-AVLQISSTIHRKKNAIGLRMSTAVQ 231
            L CVL+  ++ F    K + +   Y G   L    A+ +I++   +KK+   LR+S   +
Sbjct: 1152 LYCVLRNSELTFYKDAKNLALGMPYHGEEPLALRHAICEIAANYKKKKHVFKLRLSNGSE 1211

Query: 230  ELFH 219
             LFH
Sbjct: 1212 WLFH 1215


>AF465439-1|AAL73492.1| 1028|Homo sapiens beta I spectrin form betaI
            sigma3 protein.
          Length = 1028

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -1

Query: 404  LRCVLKLVQIVF*LPTK-IVINFTYAGTTSL*FS-AVLQISSTIHRKKNAIGLRMSTAVQ 231
            L CVL+  ++ F    K + +   Y G   L    A+ +I++   +KK+   LR+S   +
Sbjct: 906  LYCVLRNSELTFYKDAKNLALGMPYHGEEPLALRHAICEIAANYKKKKHVFKLRLSNGSE 965

Query: 230  ELFH 219
             LFH
Sbjct: 966  WLFH 969


>AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythrocytic
            (includes spherocytosis, clinical type I) variant
            protein.
          Length = 2332

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -1

Query: 404  LRCVLKLVQIVF*LPTK-IVINFTYAGTTSL*FS-AVLQISSTIHRKKNAIGLRMSTAVQ 231
            L CVL+  ++ F    K + +   Y G   L    A+ +I++   +KK+   LR+S   +
Sbjct: 2210 LYCVLRNSELTFYKDAKNLALGMPYHGEEPLALRHAICEIAANYKKKKHVFKLRLSNGSE 2269

Query: 230  ELFH 219
             LFH
Sbjct: 2270 WLFH 2273


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,315,331
Number of Sequences: 237096
Number of extensions: 1787450
Number of successful extensions: 6891
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6891
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)