Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a16r
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 45 6e-05
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 44 1e-04
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 44 1e-04
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 32 0.34
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 31 1.0
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 31 1.0
Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical p... 30 1.8
AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical... 30 1.8
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 28 5.5
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 28 7.2
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 58.8 bits (136), Expect = 3e-09
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = -3
Query: 639 RFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENVEDEDNDNAXXXXXX 463
RF C + + CP +L+Y+ + E CDW HNV ECG+ E E+E + +
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGE----EGEENEFSGDGSGESSG 96
Query: 462 XXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLY 283
+ +C ++ D V + + IC + P LSC L+Y
Sbjct: 97 DEEITFGDSSGESSGDELLENVC-ESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIY 155
Query: 282 NPSKEECDWPQNVDCGSRI 226
+P+ ++C W +D S++
Sbjct: 156 DPTNKKCSWKGMIDECSQV 174
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 678 DSDXVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRT-IPENV 505
+SD + E F+ C CP NL++NP+ CDWP NV +C +++ P+N
Sbjct: 180 ESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEKPQNC 239
Query: 504 EDED 493
+ D
Sbjct: 240 GEVD 243
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 381 SDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DCGSR 229
SD + E + F+ C +CP NL++NP+ CDWP+NV DC +
Sbjct: 181 SDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 21/169 (12%)
Frame = -3
Query: 684 ENDSDXVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDRTIPENV 505
E+ D V + + + C + P L C L+Y+P+N++C W ++ + E
Sbjct: 120 ESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDECSQVSGEYC 179
Query: 504 EDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAA--PTLCAQTGSDSVLIAHENCDK---- 343
E + N + NC + P + + +V+ E +K
Sbjct: 180 ESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEKPQNC 239
Query: 342 ---------------FYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVD 241
F C N P+V+ CP L+++ + CD+ NVD
Sbjct: 240 GEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVD 288
Score = 37.9 bits (84), Expect(2) = 7e-08
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 636 FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-EC 532
F C N P+ + CP L+++ N+ CD+ NV EC
Sbjct: 255 FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Score = 36.3 bits (80), Expect(2) = 7e-08
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 411 AAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQ 250
A+ L T D+ L A + + C N + + CPP+L++N + CD+P+
Sbjct: 303 ASEALTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPE 356
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -3
Query: 645 CT-RFYKCFNSRPVALICPPNLLYNPSNEQCDWPH-NVEC 532
CT R C N R CPP+L++N ++ CD+P +++C
Sbjct: 322 CTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKC 361
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 396 CAQTGSDSVLIAHENCDKFYIC-WNHKPVVLSCPPNLLYNPSKEECDWPQNV 244
C++ GS + NC+ FY C W K VV++CP ++NP CDWP V
Sbjct: 1245 CSEHGS--FIADANNCEVFYRCVWGRK-VVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 648 HCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPEN 508
+C FY+C R V + CP ++NP CDWP V C + N
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQASDSN 1304
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 348 DKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVD 241
D FY C N+ CPP ++N +++ CD+ D
Sbjct: 207 DVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQCTTD 242
Score = 31.1 bits (67), Expect = 0.78
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 636 FYKCFNSRPVALICPPNLLYNPSNEQCDW 550
FY C N+ CPP ++N + + CD+
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 351 CDKFYI-CWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DCGSR 229
C + YI C N +V C +L +N + +EC + V +CGS+
Sbjct: 704 CSQKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 639 RFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDR 523
++ +C N + C +L +N + ++C + V ECG +
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -3
Query: 342 FYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DC 238
FYIC N + V +CP NL++NP ECD+ NV DC
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/143 (23%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Frame = -3
Query: 645 CTRFY-KCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDRTIPENVEDEDNDNAXXXX 469
C ++ KC+N + CP L Y+ ++CD NVE PE D A
Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVE----GCPEYKPTTDATPAAEQP 756
Query: 468 XXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHEN----CDKFYI-CWNHKPVVLS 304
+ T Q + + + N C+ +YI C N + +
Sbjct: 757 VISYQNYGYSQSTTKAYNPSVTTPSPQHAAFCERLENGNYGLDCEDYYISCNNFETTINR 816
Query: 303 CPPNLLYNPSKEECDWPQNV-DC 238
CP L Y+ CD+ ++V DC
Sbjct: 817 CPAGLFYSKLNNRCDYKEHVEDC 839
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3
Query: 636 FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV 538
FY C N + VA CP NL++NP +CD+ NV
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/140 (22%), Positives = 48/140 (34%), Gaps = 5/140 (3%)
Frame = -3
Query: 645 CTRFY-KCFNSRPVALICPPNLLYNPSNEQCDWPHNVE-CGD-RTIPENVED-EDNDNAX 478
C +Y C N CP L Y+ N +CD+ +VE C + + P E
Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPEYKPTPSTTPAAEQPGTTK 859
Query: 477 XXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYI-CWNHKPVVLSC 301
D + + +G + A C + Y+ C + ++ SC
Sbjct: 860 YTTYNYPNIDYTSTTPGPVDTTPLAKAFSCSGRPDGIYALPYCSQDYVQCMQGRSLISSC 919
Query: 300 PPNLLYNPSKEECDWPQNVD 241
P L YN C + VD
Sbjct: 920 APGLFYNEKNGMCAYKHTVD 939
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 354 NCDKFYI-CWNHKPVVLSCPPNLLYNPSKEECDWPQNVD 241
+C+K+ I C+N K CP L Y+ +++CD +NV+
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVE 738
Score = 35.1 bits (77), Expect = 0.048
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 651 EHCTR-FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVE 535
E CT+ F+ C + R A CP +L++N + CD+ N E
Sbjct: 444 EACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 663 LVAHEHCTRFY-KCFNSRPVALICPPNLLYNPSNEQCDWPHNVE 535
+ A +C++ Y +C R + C P L YN N C + H V+
Sbjct: 896 IYALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVD 939
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 387 TGSDSVLIAHENCDK-FYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVD 241
TG + E C K F+ C + + CP +L++N + CD+ +N +
Sbjct: 434 TGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 396 CAQTGSDSVLIAHENCDK-FYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DC 238
C TG D + C F+ C N K +CP L+Y + CD+P++V DC
Sbjct: 203 CKVTG-DMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 636 FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVE 535
F++C N + CP L+Y CD+P +V+
Sbjct: 221 FWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVK 254
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 645 CTRFY-KCFNSRPVALICPPNLLYNPSNEQCDWPH-NVECGDRTIPENVE 502
C+ Y C N R + C L+YN + C++ N +CG+ IP E
Sbjct: 1037 CSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDCGNDYIPPVAE 1086
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 1/130 (0%)
Frame = -3
Query: 636 FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENVEDEDNDNAXXXXXXX 460
F C N R + + CP L ++ S +CD+ NV EC + + E+ E +
Sbjct: 324 FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESGEASGEQSGEGSGEAS 383
Query: 459 XXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYN 280
+ S G D+ L A + C N + CP +L++N
Sbjct: 384 GEASGESSG----EGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFN 439
Query: 279 PSKEECDWPQ 250
CD+PQ
Sbjct: 440 DQSLICDYPQ 449
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 642 TRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENVEDED 493
T F C + CP +L++NP+ CDWP +V EC P+ +ED
Sbjct: 262 TNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEED 312
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 13/155 (8%)
Frame = -3
Query: 645 CTRFYK-CFNSRPVALICPPNLLYNPSNEQCDWPHNVE-CG-DRTIPENVEDEDNDNAXX 475
CT +Y C + L CP L Y+ +++C W VE C D TI + + + +
Sbjct: 151 CTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSGETSGEGSGE 210
Query: 474 XXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIA------HEN--CD-KFYICWNH 322
+ + +G H N C F C
Sbjct: 211 ASGEASGEGSGEASGESSGQGSGEASGEGSGELEPTCEGKADGIHPNGVCSTNFLTCSGG 270
Query: 321 KPVVLSCPPNLLYNPSKEECDWPQNV-DCGSRIIP 220
++ CP +L++NP+ CDWP++V +C P
Sbjct: 271 IARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 681 NDSDXVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV 538
N D + E +F C + CP +L+YN CDW HNV
Sbjct: 26 NALDGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 417 PSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 244
P+ PT C + G S + F C N + +V+ CP L ++ S CD+ NV
Sbjct: 303 PTPQPT-CEEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNV 356
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 369 LIAHENCD-KFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 244
L A C+ +F C ++ CP +L+YN CDW NV
Sbjct: 31 LYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 1/130 (0%)
Frame = -3
Query: 636 FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENVEDEDNDNAXXXXXXX 460
F C N R + + CP L ++ S +CD+ NV EC + + E+ E +
Sbjct: 324 FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESGEASGEQSGEGSGEAS 383
Query: 459 XXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYN 280
+ S G D+ L A + C N + CP +L++N
Sbjct: 384 GEASGESSG----EGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFN 439
Query: 279 PSKEECDWPQ 250
CD+PQ
Sbjct: 440 DQSLICDYPQ 449
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 642 TRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENVEDED 493
T F C + CP +L++NP+ CDWP +V EC P+ +ED
Sbjct: 262 TNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEED 312
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 13/155 (8%)
Frame = -3
Query: 645 CTRFYK-CFNSRPVALICPPNLLYNPSNEQCDWPHNVE-CG-DRTIPENVEDEDNDNAXX 475
CT +Y C + L CP L Y+ +++C W VE C D TI + + + +
Sbjct: 151 CTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSGETSGEGSGE 210
Query: 474 XXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIA------HEN--CD-KFYICWNH 322
+ + +G H N C F C
Sbjct: 211 ASGEASGEGSGEASGESSGQGSGEASGEGSGELEPTCEGKADGIHPNGVCSTNFLTCSGG 270
Query: 321 KPVVLSCPPNLLYNPSKEECDWPQNV-DCGSRIIP 220
++ CP +L++NP+ CDWP++V +C P
Sbjct: 271 IARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 681 NDSDXVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV 538
N D + E +F C + CP +L+YN CDW HNV
Sbjct: 26 NALDGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 417 PSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 244
P+ PT C + G S + F C N + +V+ CP L ++ S CD+ NV
Sbjct: 303 PTPQPT-CEEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNV 356
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 369 LIAHENCD-KFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 244
L A C+ +F C ++ CP +L+YN CDW NV
Sbjct: 31 LYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -3
Query: 414 SAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEEC 262
+A+ T SD NC F +C + K +SCP L Y+ S + C
Sbjct: 474 TASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 645 CTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVEC 532
C +F +C N CP L ++ CD P +C
Sbjct: 578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 639 RFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENV 505
+F C + CP +L+Y+P C++ +NV +CG +P++V
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCGG--VPQDV 120
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -3
Query: 420 DPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV- 244
D A T C+ T D + +F C ++ CP +L+Y+P C++ NV
Sbjct: 53 DAVAIDTDCS-TKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVP 111
Query: 243 DCG 235
CG
Sbjct: 112 QCG 114
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 639 RFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENV 505
+F C + CP +L+Y+P C++ +NV +CG +P++V
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCGG--VPQDV 120
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -3
Query: 420 DPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV- 244
D A T C+ T D + +F C ++ CP +L+Y+P C++ NV
Sbjct: 53 DAVAIDTDCS-TKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVP 111
Query: 243 DCG 235
CG
Sbjct: 112 QCG 114
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 657 AHEHCTRFYK-CFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTI 517
A E C++ YK C N + IC L ++P +C + EC T+
Sbjct: 533 AIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 357 ENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 244
E D + C N + + CP L ++ ++ CD+ NV
Sbjct: 226 ECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNV 263
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 639 RFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENV 505
+F C + CP +L+Y+P C++ +NV +CG +P++V
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCGG--VPQDV 120
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -3
Query: 420 DPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV- 244
D A T C+ T D + +F C ++ CP +L+Y+P C++ NV
Sbjct: 53 DAVAIDTDCS-TKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVP 111
Query: 243 DCG 235
CG
Sbjct: 112 QCG 114
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 657 AHEHCTRFYK-CFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTI 517
A E C++ YK C N + IC L ++P +C + EC T+
Sbjct: 533 AIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 357 ENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 244
E D + C N + + CP L ++ ++ CD+ NV
Sbjct: 226 ECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNV 263
>Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 599 FVRQICCIILVTSSVTGLIM*SVETEPFQKTSRMRTTIMPAMAIWT 462
F+ IC I+ ++V+G I S E EPF T+ TT +P + T
Sbjct: 4 FLMLICIILFYVNTVSGCIP-SQEIEPFTTTAVPTTTTIPIDPVTT 48
>AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 599 FVRQICCIILVTSSVTGLIM*SVETEPFQKTSRMRTTIMPAMAIWT 462
F+ IC I+ ++V+G I S E EPF T+ TT +P + T
Sbjct: 4 FLMLICIILFYVNTVSGCIP-SQEIEPFTTTAVPTTTTIPIDPVTT 48
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 372 VLIAHENCDKFYICWNHKPVVLSCPPNLL 286
VLIA++NC+ +I N + ++L C N +
Sbjct: 133 VLIANQNCEPRWIAKNREDLLLMCDSNFV 161
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 657 AHEHCTRFYKCFNSR--PVALICPPNLLYNPSN 565
A++H ++ K +N + VALICPP + N
Sbjct: 66 ANKHMEKYSKLYNDKGYDVALICPPTFSFTVPN 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,482,177
Number of Sequences: 27780
Number of extensions: 300771
Number of successful extensions: 763
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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