Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a16f
(781 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 53 2e-07
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 42 7e-04
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 40 0.002
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 40 0.002
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 40 0.002
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 36 0.028
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 33 0.34
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 33 0.34
SB_725| Best HMM Match : Apolipoprotein (HMM E-Value=0.51) 32 0.45
SB_3636| Best HMM Match : Big_2 (HMM E-Value=1.6) 31 1.0
SB_37759| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 29 4.2
SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19) 29 5.6
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 7.4
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 28 9.8
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_38159| Best HMM Match : Peptidase_M28 (HMM E-Value=4.7e-09) 28 9.8
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 28 9.8
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 64.9 bits (151), Expect = 7e-11
Identities = 40/147 (27%), Positives = 56/147 (38%)
Frame = +2
Query: 197 SDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRTIPXXXXXX 376
SDG + C F C+ + CP NL FNP+ + CD P NV+CG P
Sbjct: 447 SDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPPTPKVPP 506
Query: 377 XXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA 556
P + C K +G +C F C + +
Sbjct: 507 TTKA--------------------PFTKSPFCVGK-QNGKYADANNCNGFVMCSNGYIYY 545
Query: 557 LICPPNLLYNPNNEQCDWPHNVECGDR 637
+ CP NL Y+P +C+W V+CG R
Sbjct: 546 MDCPSNLRYDPAKGRCEWADTVDCGQR 572
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +2
Query: 470 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECG 631
CAE+ SDG + C F C + + CP NL +NP + CD P NV+CG
Sbjct: 443 CAER-SDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCG 495
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +2
Query: 224 HCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDR--TIPXXXXXXXXXXXXX 397
+C F C+ G CP NL F+ +C+WP+ V C R T+P
Sbjct: 610 NCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSRPTTVP------------- 656
Query: 398 XXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNL 577
PS +E C +K+ +G +C + C + C L
Sbjct: 657 ----------YVTKPTPPSGNSEFC-KKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGL 705
Query: 578 LYNPNNEQCDWPHNVEC 628
+N ++CD P NV+C
Sbjct: 706 RFNGVTKRCDLPRNVKC 722
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 470 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDR 637
C EK +G +C F C + + CP NL ++ +C+WP+ V C R
Sbjct: 597 CEEK-KNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSR 651
Score = 35.9 bits (79), Expect(2) = 1e-05
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 200 DGILVAHEHCTRFYKCAEGRPVALK-CPPNLLFNPSNEQCDWPHNV 334
DG +C + C+ G +A + CP L FN + CD+P NV
Sbjct: 321 DGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 173 TEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 340
+E C + G+ H +C + C G C L FN ++CD P NV+C
Sbjct: 668 SEFCKKNGNGRYRDPH-NCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLPRNVKC 722
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 449 PSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA-LICPPNLLYNPNNEQCDWPHNV 622
P + + C E+ DG +C + C + +A CP L +N CD+P NV
Sbjct: 309 PLVDSNFCTERQ-DGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
Score = 31.1 bits (67), Expect(2) = 1e-05
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 452 SLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCD 607
S + C EK SDG +C F C + H + CP ++P ++C+
Sbjct: 372 SSGSGFCHEK-SDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 200 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDR 349
DG V +C F KC+ CP NL FN DW + G+R
Sbjct: 736 DGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKK---DWAEYNKTGER 782
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +2
Query: 476 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDRI 640
E DG V +C F KC + CP NL +N + ++ E G R+
Sbjct: 732 EGRKDGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKKDWAEYNKTGERGYRL 786
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 58.8 bits (136), Expect = 5e-09
Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 7/141 (4%)
Frame = +2
Query: 227 CTRFYKCAEGRPVAL-KCPPNLLFNPSNEQCDWPHNVECGDRTI-----PXXXXXXXXXX 388
C+RFY+C L +CP L ++ CDWP V+C DRT P
Sbjct: 1152 CSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDC-DRTTSTPPTPTTKPECDLHC 1210
Query: 389 XXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALI-C 565
+ T C EK + G C+RFY+C H L C
Sbjct: 1211 QTLSPDGSCTVAPGYAVVNGMCVDTYFCKEKPN-GHYADPRDCSRFYQCDAFHRAFLHRC 1269
Query: 566 PPNLLYNPNNEQCDWPHNVEC 628
P L ++ CDWP V+C
Sbjct: 1270 PAGLKWSVKKTACDWPRYVDC 1290
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/145 (26%), Positives = 56/145 (38%), Gaps = 11/145 (7%)
Frame = +2
Query: 227 CTRFYKC-AEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRT-IPXXXXXXXXXXXXXX 400
C+RFY+C A R +C P L ++ + CDWP NV+C +T P
Sbjct: 797 CSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDCDRKTPTPPSPTPPTTTPKPAC 856
Query: 401 XXXXXXXXXXXXXHADPS--------LATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA 556
P + T C +K +G C++FY+C H
Sbjct: 857 DLHCQTLNPDGSCTVAPGYEVVNGMCVDTTFCKDK-PNGHYADPRDCSKFYQCDAFHRAF 915
Query: 557 L-ICPPNLLYNPNNEQCDWPHNVEC 628
L CP L ++ CDWP V+C
Sbjct: 916 LHRCPAGLKWSVKKTACDWPRYVDC 940
Score = 54.4 bits (125), Expect = 1e-07
Identities = 45/151 (29%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Frame = +2
Query: 227 CTRFYKC-AEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRT--IPXXXXXXXXXXXXX 397
C+RFY+C A R +CP L ++ CDWP V+C DRT P
Sbjct: 1252 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC-DRTTSTPPTPTPLTPTTKPA 1310
Query: 398 XXXXXXXXXXXXXXHADP--SLATEICAE----KD-SDGVLVAHEHCTRFYKCFDSHPVA 556
P + +C + KD G C+RFY+C SH
Sbjct: 1311 CDLHCQTLNPDGSCTVAPGYEVVNGMCVDTTFCKDRPHGHYADPRDCSRFYQCDASHKTF 1370
Query: 557 L-ICPPNLLYNPNNEQCDWPHNVECGDRIIP 646
L CP L ++ CD P V+C DR IP
Sbjct: 1371 LHRCPDGLKWSVKKTACDLPLYVDC-DRTIP 1400
Score = 54.0 bits (124), Expect = 1e-07
Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 12/146 (8%)
Frame = +2
Query: 227 CTRFYKC-AEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRT--IPXXXXXXXXXXXXX 397
C++FY+C A R +CP L ++ CDWP V+C DRT P
Sbjct: 902 CSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC-DRTTSTPPTPTTHTPTIKPA 960
Query: 398 XXXXXXXXXXXXXXHADPS--------LATEICAEKDSDGVLVAHEHCTRFYKCFDSHPV 553
P+ + T C +K +G C+RFY+C H
Sbjct: 961 CDLHCQTLNLDGTCTVMPNYQVVNGMCVDTTFCKDK-PNGHYADPMDCSRFYQCDAFHRA 1019
Query: 554 AL-ICPPNLLYNPNNEQCDWPHNVEC 628
L CP L ++ CDWP V+C
Sbjct: 1020 FLHRCPAGLKWSVKKTTCDWPRYVDC 1045
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 461 TEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALI-CPPNLLYNPNNEQCDWPHNVECGDR 637
T C +K + G C+RFY+C H L C P L ++ CDWP NV+C DR
Sbjct: 780 TTFCKDKPN-GYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDC-DR 837
Query: 638 IIP 646
P
Sbjct: 838 KTP 840
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 227 CTRFYKC-AEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRT 352
C+RFY+C A R +CP L ++ CDWP V+C DRT
Sbjct: 1007 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYVDC-DRT 1048
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 461 TEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALI-CPPNLLYNPNNEQCDWPHNVEC 628
T C +K + G C+RFY+C H L CP L ++ CDWP V+C
Sbjct: 1135 TTFCKDKPN-GHYADPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDC 1190
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +2
Query: 515 CTRFYKCFDSHPVALI-CPPNLLYNPNNEQCDWPHNVECGDRIIPXXXXXXXXXXXXXXX 691
C +FY C+ S L CP LL++ + CD+PH V+C P
Sbjct: 582 CAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTPPVTTTKSTTSSTTKG 641
Query: 692 XXXXXTITLEMDXPT 736
T + PT
Sbjct: 642 TTASTTTSTPTTTPT 656
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 188 RIGSD-GILVAHEHCTRFYKC-AEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRTIP 358
R+G G + C +FY C + +CP LL++ + CD+PH V+C T P
Sbjct: 568 RLGKPRGYYADPKDCAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 461 TEICAEKDSDGVLVAHEHCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVEC 628
T C +K SD +C+R Y+C H L CP L +N CD P NV C
Sbjct: 1451 TSFCKDKTSD-YYHDPRNCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 224 HCTRFYKCAEGRPVALK-CPPNLLFNPSNEQCDWPHNVEC 340
+C+R Y+C LK CP L +N CD P NV C
Sbjct: 1467 NCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/67 (40%), Positives = 31/67 (46%)
Frame = +2
Query: 140 TKGVNFESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCD 319
T+G S K C R G DGI E+C F C G CPP L+FN CD
Sbjct: 444 TEGTPKYSNKDGMFCERNG-DGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCD 502
Query: 320 WPHNVEC 340
W H V+C
Sbjct: 503 WSHEVKC 509
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 476 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 628
E++ DG+ E+C F C CPP L++N + CDW H V+C
Sbjct: 459 ERNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKC 509
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 464 EICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 628
+ C K ++ C F C + + CP LLYN +QCDWP NV+C
Sbjct: 74 DFCKYKPDGEYRDPYDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 218 HEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 340
++ C F C CP LL+N +QCDWP NV+C
Sbjct: 88 YDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +2
Query: 92 VALSNASVIKENTNKATKGVNFESGKAT-----EICARIGSDGILVAHEHCTRFYKCAEG 256
V S +V N+ + N GKAT + CA +DG + C+ +Y+C +G
Sbjct: 193 VQFSGLTVGDPNSIRCFGQGNIPPGKATPAEDEKFCAG-KTDGTYADPKDCSAYYQCKKG 251
Query: 257 RPVALKCPPNLLFNPSNEQCDWPHNVEC 340
R CP L FN + CD P V C
Sbjct: 252 RSFKKFCPDGLKFNALIKSCDEPSKVNC 279
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 443 ADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV 622
A P+ + CA K +DG + C+ +Y+C CP L +N + CD P V
Sbjct: 219 ATPAEDEKFCAGK-TDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKV 277
Query: 623 EC 628
C
Sbjct: 278 NC 279
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 152 NFESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHN 331
N S + IC +DG + C + C+ G + CP L +N + CDWP N
Sbjct: 76 NLFSVNLSTICKN-RADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFN 134
Query: 332 VEC 340
C
Sbjct: 135 APC 137
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 467 ICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 628
IC + +DG + C + C + + CP L +N + CDWP N C
Sbjct: 85 ICKNR-ADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPC 137
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 161 SGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 340
+G+ C + ++G E+C + C+ +CP L +N + + CDWP N C
Sbjct: 55 NGEVNSFCKK-RANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPC 113
Query: 341 GDR 349
++
Sbjct: 114 EEK 116
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 476 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDR 637
+K ++G E+C + C + CP L +N + CDWP N C ++
Sbjct: 63 KKRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCEEK 116
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 512 HCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVEC 628
+C+RFY+C H L CP L ++ CDWP V+C
Sbjct: 128 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 224 HCTRFYKCAEGRPVAL-KCPPNLLFNPSNEQCDWPHNVEC 340
+C+RFY+C L CP L ++ + CDWP V+C
Sbjct: 128 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 464 EICAEKDSDGVLVAHEHCTRFYKCFDSHPV-ALICPPNLLYNPNNEQCDWPHNVEC 628
+ C E+D+ G V + C+++Y+C D H C L ++ CD +V+C
Sbjct: 20 DYCKERDA-GCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDC 74
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 512 HCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVEC 628
+C+RFY+C H L CP L ++ CDWP V+C
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 224 HCTRFYKCAEGRPVAL-KCPPNLLFNPSNEQCDWPHNVEC 340
+C+RFY+C L CP L ++ + CDWP V+C
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 36.3 bits (80), Expect = 0.028
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 452 SLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 628
S+ ++CA+K L C +Y C V C P +++P C+W +C
Sbjct: 16 SVHADLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKC 74
Score = 34.7 bits (76), Expect = 0.085
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +2
Query: 176 EICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 340
++CA L C +Y C G+ V C P +++P C+W +C
Sbjct: 20 DLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKC 74
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 464 EICAEKDSDGVLVAHEHCTRFYKCFDSHPV-ALICPPNLLYNPNNEQCDWPHNVEC 628
+ C E+D+ G V + C+++Y+C D H C L ++ CD +V+C
Sbjct: 2 DFCKERDA-GCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 56
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 464 EICAEKDSDGVLVAHEHCTRFYKCFDSHPV-ALICPPNLLYNPNNEQCDWPHNVEC 628
+ C E+D+ G V + C+++Y+C D H C L ++ CD +V+C
Sbjct: 69 DFCKERDA-GCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 123
>SB_725| Best HMM Match : Apolipoprotein (HMM E-Value=0.51)
Length = 567
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 446 DPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQC 604
D L + +K+SD E T +KCF S P ++C L P E C
Sbjct: 252 DDGLVAIVVKKKESDVRQQQQEFVTALHKCFGSKPTVMVCVDGL--KPLPEDC 302
>SB_3636| Best HMM Match : Big_2 (HMM E-Value=1.6)
Length = 218
Score = 31.1 bits (67), Expect = 1.0
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +3
Query: 363 TTMMLIVKVTMAVEETETKTITLEMD-TPTPAWLLKYVLKKIQTVFWSPMSTAPDFTNVS 539
TTM + V VTM + T T TIT+ + T T + + TV + T V+
Sbjct: 25 TTMTMTVTVTMTITMTMTMTITMTITVTMTITVTMTITVTMTITVTMTMTMTMTMTVTVT 84
Query: 540 IVIQ*PSFVLQICCIILITSSATGLIM*SVETESFQKTTRMLIVKVTMAVEETET 704
+ I + + + + IT + T + +V T + V VTM + T T
Sbjct: 85 MTI---TMTMTMTITMTITVTMTMTVTMTVTMTMTMTMTMTMTVTVTMTITMTMT 136
>SB_37759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 30.3 bits (65), Expect = 1.8
Identities = 31/144 (21%), Positives = 58/144 (40%)
Frame = +3
Query: 267 HLSALQIYCLILATSNVTGLIM*SVETEPFQKTTMMLIVKVTMAVEETETKTITLEMDTP 446
H+S L I L+ T T L+ +++ TT+ + T + T T TL + T
Sbjct: 89 HISTLVITTLVTTTLVTTTLVTTTLDIITLITTTLDITTLATTTLATTTLVTTTLVITTL 148
Query: 447 TPAWLLKYVLKKIQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQICCIILITSSATGLIM*S 626
L+ L I T+ + + T T + + L ++ T T L++ +
Sbjct: 149 VTTTLVTTTL-VITTLVITTLVTTTLVTTTLVTTTLVTTTLVTTTLVTTTLVTTTLVITT 207
Query: 627 VETESFQKTTRMLIVKVTMAVEET 698
+ + TT+ + +T V+ T
Sbjct: 208 LVIITLVTTTQHQFLVITTLVKST 231
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 455 LATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWP 613
L++ C K S GV ++ ++F C++ C L++NP + C+ P
Sbjct: 2 LSSNFCKVKTS-GVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQP 53
>SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19)
Length = 2253
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 446 DPSLATEICAEKDSDGVLVAHEHCT 520
+ ++ ++ AEKD +G+L AHE CT
Sbjct: 1723 EENIDKKMMAEKDDNGILRAHEVCT 1747
>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 915
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 44 FFVMEKFKGILLVLYAVALSNASVIKENTNKATK 145
F K+ ++ +Y+VA + +++KENTN + K
Sbjct: 399 FLPRNKYTNVMDAVYSVAYAVQALLKENTNSSKK 432
>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -2
Query: 183 QISVALPDSKLTPLVALLVFSLMTDAFDNATAYNTNR 73
+I+ P+S PLV ++ F+ + DA+D+ + ++R
Sbjct: 91 EITALKPESTAVPLVFVIGFTAIKDAYDDIRRHQSDR 127
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 197 SDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCD 319
+DG C + C+ G + CP L +N ++CD
Sbjct: 340 ADGNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +2
Query: 218 HEHCTRFYKCAEG-----RPVALKCPPNLLFNPSNEQCD 319
H+ CT KC G CPP+ FNP + QC+
Sbjct: 781 HDRCT---KCNHGLVKVWSQCLASCPPSYFFNPRDMQCE 816
>SB_38159| Best HMM Match : Peptidase_M28 (HMM E-Value=4.7e-09)
Length = 1049
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 569 PNLLYNPNNEQCDWPHNVECGDRI 640
P L PN QC W N++ G ++
Sbjct: 107 PQLFKKPNRSQCTWVINIQGGKKV 130
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 470 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALI--CPPNLLYNPNNEQCDWPHNVECGDR 637
C +K D + C+++Y C D + + CP L+N N++CD V C R
Sbjct: 1492 CVDKCHD--FADPKDCSKYYHC-DGYDDGRLRSCPTGQLWNHVNKKCDRADLVICDPR 1546
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 227 CTRFYKCAEGRPVALK-CPPNLLFNPSNEQCDWPHNVECGDR 349
C+++Y C L+ CP L+N N++CD V C R
Sbjct: 1505 CSKYYHCDGYDDGRLRSCPTGQLWNHVNKKCDRADLVICDPR 1546
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,695,642
Number of Sequences: 59808
Number of extensions: 375457
Number of successful extensions: 1039
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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