Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a14r
(721 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 44 1e-04
At5g61340.1 68418.m07697 expressed protein 42 5e-04
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 41 7e-04
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 41 0.001
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 40 0.001
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 40 0.002
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 37 0.012
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 37 0.015
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 35 0.047
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 35 0.047
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 35 0.047
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 35 0.047
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 33 0.14
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 33 0.25
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 32 0.33
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 32 0.33
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 31 0.58
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 31 1.0
At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, pu... 28 5.4
At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, pu... 28 5.4
At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, pu... 28 5.4
At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /... 28 5.4
At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /... 28 5.4
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 28 7.2
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 27 9.5
At1g78740.1 68414.m09177 hypothetical protein 27 9.5
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 581
E D+A E+N+ +MPTFV VK GK+++ GA D
Sbjct: 88 ELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKD 122
>At5g61340.1 68418.m07697 expressed protein
Length = 326
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +2
Query: 416 KLISSN-SLQTLKTFFIHLLKTYTC-FFFLIPS*FPSAAAYNFSLYLLVFKDSCFEFVDV 589
KL+S+N S + F++ LLKTY C FFFL+ SA A F+L+ L + + E
Sbjct: 108 KLLSNNHSADSSSVFYLRLLKTYVCNFFFLL-----SANASAFALFFLAY--NTLEAFGF 160
Query: 590 SAREFVQFLAI 622
S+R F FL++
Sbjct: 161 SSRNFYTFLSL 171
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 581
E +++AS+ + +MPTF+F+K+G +D+ GAN D
Sbjct: 65 EVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPD 99
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 587
E + +A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 70 ELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/33 (42%), Positives = 27/33 (81%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 587
+ D+A+ +NI+S+PTF F+++GK++D+ GA+
Sbjct: 333 KANDVAASWNISSVPTFCFIRDGKEVDKVVGAD 365
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 581
E + +AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 69 ELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 581
E + +A E+ + +MPTFVF+K G +D GA D
Sbjct: 68 ELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKD 102
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 587
E D +S ++I + PTF F+KNG+++ + GAN
Sbjct: 86 ELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 35.1 bits (77), Expect = 0.047
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 590
E + ++E+N+ + PT VF+K+G+++D+ GA
Sbjct: 49 ELAEFSNEWNVEATPTVVFLKDGRQMDKLVGA 80
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1
Query: 673 IASEYNINSMPTFVFVKNGKKLDEFSGA 590
IA++Y I ++PTF+ K+G+ D F GA
Sbjct: 127 IANKYKIEALPTFILFKDGEPCDRFEGA 154
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 35.1 bits (77), Expect = 0.047
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 676 DIASEYNINSMPTFVFVKNGKKLDEFSGANVD 581
D+A Y ++P FVFVK G+++D GA D
Sbjct: 87 DVAGTYRAITLPAFVFVKRGEEIDRVVGAKPD 118
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1
Query: 673 IASEYNINSMPTFVFVKNGKKLDEFSGA 590
+A++Y I ++PTF+ K+GK D F GA
Sbjct: 122 LANKYQIEALPTFILFKDGKLWDRFEGA 149
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 33.5 bits (73), Expect = 0.14
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 587
E + + E+N+++ PT VF+K+G+++D+ G +
Sbjct: 103 ELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGD 135
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 587
E +I+ Y++ ++P FVF K+GK +D GA+
Sbjct: 62 EHPEISEAYSVAAVPYFVFFKDGKTVDTLEGAD 94
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 590
E +A E+ + +MPTF+F+K G+ + GA
Sbjct: 68 ELNTVAEEFKVQAMPTFIFMKEGEIKETVVGA 99
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -1
Query: 664 EYNINSMPTFVFVKNGKKLDEFSGANVD 581
E+N++++P VF+K G+++D G VD
Sbjct: 107 EFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 587
E +I+ Y++ +P FVF K+GK +D GA+
Sbjct: 62 EHPEISEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 685 ECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 590
E + A+ Y I S+PT + K G+K D GA
Sbjct: 146 ESPNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 277
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 371 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 463
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 60 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 90
>At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 371 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 463
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 65 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 95
>At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 371 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 463
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 65 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 95
>At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 498 KKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 388
K K HV + + +KN++ N +N C + CK
Sbjct: 327 KGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 498 KKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 388
K K HV + + +KN++ N +N C + CK
Sbjct: 327 KGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 673 IASEYNINSMPTFVFVKNGKKLDEFSG 593
+A EY I ++P + KNG+K + G
Sbjct: 130 VAEEYEIKAVPVVLLFKNGEKRESIMG 156
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 658 NINSMPTFVFVKNGKKLDEFSGA 590
+I PTF F ++G+K+DE GA
Sbjct: 91 HIRYTPTFQFYRDGEKVDEMFGA 113
>At1g78740.1 68414.m09177 hypothetical protein
Length = 306
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 543 SIYLCLRIVVLSLSTLA-PENSSSFLPFLTKTNVG 644
+IY+C +V L LST+ P S LPFL +G
Sbjct: 94 TIYICESLVSLKLSTVTLPSVKSVSLPFLRVLKLG 128
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,853,085
Number of Sequences: 28952
Number of extensions: 264447
Number of successful extensions: 615
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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