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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a14f
         (486 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)                     64   6e-11
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)           64   6e-11
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)           50   1e-06
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)               50   1e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)                48   3e-06
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)               46   1e-05
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)           45   3e-05
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   4e-05
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)                 44   5e-05
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)                 44   9e-05
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)                 42   3e-04
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.001
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)                 38   0.003
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)           38   0.003
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)                   34   0.054
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)       31   0.38 
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)           31   0.50 
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.67 
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)              31   0.67 
SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2)                    30   0.88 
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.2  
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)             29   1.5  
SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)            29   2.7  
SB_50201| Best HMM Match : BCNT (HMM E-Value=9.8)                      27   6.2  
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)            27   8.2  

>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
          Length = 308

 Score = 64.1 bits (149), Expect = 6e-11
 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
 Frame = +2

Query: 101 PKMSIHIKDSDDLKT-RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXX 277
           P+ ++ + + D   T  L  AG KLVV DF A+WCGPCK I P    + +E         
Sbjct: 5   PRGNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGL-SEKYKQAVFLK 63

Query: 278 XXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 388
                    A++  + +MPTF F KN  K+DE  GA+
Sbjct: 64  IDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGAD 100


>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
          Length = 456

 Score = 64.1 bits (149), Expect = 6e-11
 Identities = 33/92 (35%), Positives = 43/92 (46%)
 Frame = +2

Query: 113 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 292
           I ++D       +  AG +LVVIDF ATWCGPCK I P    ++ +              
Sbjct: 11  IVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKF-MDVVFLKVDVDQ 69

Query: 293 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 388
               A    I +MPTF F  N  K+DE  GA+
Sbjct: 70  CQLTAESCGIRAMPTFHFYHNKAKIDELRGAD 101


>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
          Length = 438

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 164 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 250
           +++  IDF ATWCGPC+MIGPK +E+A E
Sbjct: 11  NEVAAIDFTATWCGPCRMIGPKFEEMAKE 39


>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +2

Query: 197 WCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEF 376
           WC PCK++ P+LD I AE                  A  + +N++PT + +K GK +++F
Sbjct: 2   WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKF 61

Query: 377 SG 382
            G
Sbjct: 62  EG 63


>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 94

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +2

Query: 119 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 250
           I++  +  + +    DKLVVIDF A WCGPC+ I PK  ++A E
Sbjct: 15  IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALE 58


>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +2

Query: 191 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 370
           A WC PCK++ P+LD I AE                  A  + +N++PT + +K GK ++
Sbjct: 46  ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVME 105


>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
          Length = 472

 Score = 45.2 bits (102), Expect = 3e-05
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
 Frame = +2

Query: 131 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXX--------XXXX 286
           DD     A    K V++DF A WC  CK + P   ++A E+                   
Sbjct: 140 DDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANN 199

Query: 287 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 388
                   +YN+  +PT     +GK ++EF G N
Sbjct: 200 MATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNN 233



 Score = 31.9 bits (69), Expect = 0.29
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 164 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 253
           ++ V++DF A WC  C+ + P  D  A ++
Sbjct: 68  NEYVLVDFYAPWCSDCQRLSPLFDTAALQL 97


>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 711

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +2

Query: 95  YLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXX 274
           YLP +   +   +     LA   +   V+DF A WCGPC    PK +++A  +       
Sbjct: 430 YLPSIVSEVNSKNFFTDVLAS--EDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAA 487

Query: 275 XXXXXXXXXXASEYNINSMPT 337
                      SE NI+S PT
Sbjct: 488 KVNCEQDYGLCSEANIHSYPT 508



 Score = 32.3 bits (70), Expect = 0.22
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = +2

Query: 179 IDFMATWCGPCKMIGPKLDEIAAE-MXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKN 355
           +DF A WC PC  + P+  + A   +                   +YNI S PT +   N
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNN 366

Query: 356 GK 361
            +
Sbjct: 367 SQ 368


>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 1056

 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
 Frame = +2

Query: 56  FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 235
           + F  V  F++      +S  + D  D   +   AG  +++++F A WCG CK + P+ +
Sbjct: 519 WTFTQVSAFVLLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYE 578

Query: 236 EIAAEMXXXX----XXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSG 382
             A  +                      S+Y ++  PT    +NG+   ++ G
Sbjct: 579 TAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDG 631



 Score = 35.5 bits (78), Expect = 0.023
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 167 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 253
           K V+I+F A WCG CK + PK +E+  ++
Sbjct: 881 KDVLIEFYAPWCGHCKSLEPKYNELGEKL 909


>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 536

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = +2

Query: 149 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 328
           +A   DK V ++F A WCG CK + P  D++  +                       ++S
Sbjct: 397 VARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHS 456

Query: 329 MPTF-VFVKNGKKLDEFSGANVD 394
            PT   F K G+ +D   G  +D
Sbjct: 457 FPTIKYFPKEGEAVDYNGGRTLD 479



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
 Frame = +2

Query: 152 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXX---XXXXXXXXXXXXASEYNI 322
           A A +K V+++F A WCG CK + P+  + A ++                      ++ +
Sbjct: 37  AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQV 96

Query: 323 NSMPTFVFVKNGKKLDEFSG 382
              PT  F K+GK   E++G
Sbjct: 97  QGYPTIKFFKDGKP-SEYAG 115


>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 362

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +2

Query: 170 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTF-VF 346
           L +++F A WCG C+ + P+  + A E+                 AS Y +   PT  VF
Sbjct: 99  LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVF 158

Query: 347 ---VKNGKKLDEFSG 382
              +KN   ++++ G
Sbjct: 159 AAGIKNSHSVEDYQG 173


>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 645

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = +2

Query: 164 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXX---XXXXXXXXXXXXXXASEYNINSMP 334
           + L++++F A WCG CK + P+ ++ A E+                    A +Y +   P
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYP 252

Query: 335 TFVFVKNGKKLDEFSG 382
           T    + G K  E+ G
Sbjct: 253 TLKVFRKG-KATEYKG 267



 Score = 34.3 bits (75), Expect = 0.054
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +2

Query: 110 SIHIKDSDDLKTRLAEAGDK------LVVIDFMATWCGPCKMIGPKLDEIAAEM 253
           S  +K+ DD+    ++  D+      +++++F A WCG CK + P+  + A +M
Sbjct: 54  SDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107


>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 295

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
 Frame = +2

Query: 161 GDKLVVIDFMATWCGPCKMIGPKLDEI--AAEMXXXXXXXXXXXXXXXXXASEYNINSMP 334
           G+K  +++F A WCG CK + P  +++  A                     S +++   P
Sbjct: 38  GEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFP 97

Query: 335 TF-VFVKNGKKLDEFSG 382
           T   F K     +E++G
Sbjct: 98  TIKYFPKGSTTPEEYNG 114


>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
          Length = 70

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 107 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 250
           +S  + D  D   +   AG  +++++F A WCG CK + P+  E AAE
Sbjct: 11  LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 57


>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
          Length = 222

 Score = 34.3 bits (75), Expect = 0.054
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 149 LAEAGDKLVVIDFMATWCGPCKMIGP 226
           L E+  K+ +IDF A+WC PC++  P
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENP 197


>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
          Length = 271

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
 Frame = +2

Query: 173 VVIDFMATWCGPCKMIGPKLDEIAAEMXX--XXXXXXXXXXXXXXXASEYNINSMPTFVF 346
           V++ F A WCG CK   PK ++ A                        +  +N  PT  +
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRY 226

Query: 347 VKNGKKLDEFSGANV 391
              GK + E+ G  V
Sbjct: 227 YLYGKFVVEYDGDRV 241


>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
          Length = 148

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +2

Query: 140 KTRLAEAGD----KLVVIDFMATWCGPCKMIGPKLDEIAAEM 253
           K  L +AG+    K++ + F A WC PC+   P L +   E+
Sbjct: 13  KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEEL 54


>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 488

 Score = 30.7 bits (66), Expect = 0.67
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 167 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 253
           +++++DF A WC  C  + PK ++ A ++
Sbjct: 40  EVMLVDFYAPWCSDCDNLRPKYEKAARDL 68


>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
          Length = 293

 Score = 30.7 bits (66), Expect = 0.67
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 164 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 250
           +K+V I F A+WC PC+   P L +   E
Sbjct: 154 NKVVAIYFSASWCPPCQKFTPLLKDFYEE 182


>SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2)
          Length = 389

 Score = 30.3 bits (65), Expect = 0.88
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 246 AAISSSLGPIILHGPHQVAMKSITTSLSPASASLVFRSSESL 121
           +A SS + P++ H  H V+   + ++  P   S++  S E L
Sbjct: 338 SAQSSPINPVVYHDNHDVSTSGVKSATCPVCESVIHGSGEEL 379


>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 564

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
 Frame = +2

Query: 170 LVVIDFMATWCGPCKMIGPKLD----EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 337
           ++++DF A WC  C+ + P+L+     +AA+                     + I   P+
Sbjct: 39  IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPS 98

Query: 338 FVFVKNGKKLDEFSGANVD 394
               K GK   ++ G   D
Sbjct: 99  VKLFKFGKYAGDYIGQRTD 117


>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
          Length = 415

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 167 KLVVIDFMATWCGPCKMIGPKLDE 238
           K+V + F A WC PC+   PKL E
Sbjct: 30  KIVGLYFSAHWCPPCRGFTPKLVE 53



 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +2

Query: 158 AGD---KLVVIDFMATWCGPCKMIGPKL 232
           AGD   K+V I F A WC PC+   P+L
Sbjct: 168 AGDLKGKIVGIYFSAHWCPPCRAFTPEL 195


>SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1638

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 13  LAPNRLYVVTCVFLICILNCDIIFSF-NLSAQDVHSHQRFRRPEDKAGGSRRQARRDRLH 189
           LA ++L +  C+  IC  N      F +++++D+ + + +RRP+   G  + + +RD  H
Sbjct: 265 LAESKLTLEKCIN-ICRANETTAKQFKDITSEDISAVESYRRPQRTTGVPQNKGQRDTQH 323


>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
          Length = 386

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 167 KLVVIDFMATWCGPCKMIGPKL 232
           K V++ F A WCG CK   P+L
Sbjct: 213 KHVLVMFYAPWCGHCKKAKPEL 234



 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +2

Query: 101 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 244
           P   +H++D   DD   +     +  V++ F A WCG CK + P+  + A
Sbjct: 81  PSEVVHLRDDMFDDFVAK-----NPSVLVMFYAPWCGHCKAMKPEYVDAA 125


>SB_50201| Best HMM Match : BCNT (HMM E-Value=9.8)
          Length = 254

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +2

Query: 29  CTLSLACFLFAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVV-IDFMATWCG 205
           C +S  C   A    +L +    L K SI +   +++    A+ GDK+VV +DF  +W  
Sbjct: 3   CAVSRLCL--AQPPKLLVVEEPVLQKPSIKLCAPENVCKTFADVGDKVVVYVDFGLSW-R 59

Query: 206 PCKM 217
           PC +
Sbjct: 60  PCSL 63


>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
          Length = 432

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 121 QRFRRPEDKAGGSRRQARRDR 183
           +R RR ED+  G RR+ RRD+
Sbjct: 174 RRRRRHEDEGSGDRRRERRDK 194


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,932,288
Number of Sequences: 59808
Number of extensions: 218251
Number of successful extensions: 773
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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