Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a13r
(780 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein. 29 0.21
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 27 0.65
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 26 1.1
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 26 1.1
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 26 1.1
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 2.6
AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein. 24 4.6
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 6.1
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 24 6.1
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 24 6.1
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 23 8.0
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 23 8.0
>DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein.
Length = 407
Score = 28.7 bits (61), Expect = 0.21
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -1
Query: 618 ARGVPAVGRGLGQFLTFLNRVTGAPFNTMHLVGFSLGAHLVGNAGRELGG 469
A+ P G G + ++ R TGAP N +S +G G ++GG
Sbjct: 98 AQRSPRGGPGGSNYRRYMPRATGAPVNNFQYC-YSTAGTQMGGPGTQMGG 146
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 27.1 bits (57), Expect = 0.65
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 550 SCYSIKERQELSQTATDSGHSSSCSSIVRQSKSSPVQNNYVHVRFAEVSISDGRIDVS 723
+CY I + L + GHSS+ +I+ + +S+P N H ++ DG S
Sbjct: 3146 NCYKIYSEEHLDGMISCFGHSSTV-TIIPKFESNPRIENADHYKYCMPLTYDGHPSAS 3202
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 26.2 bits (55), Expect = 1.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 189 CCTGYRPDDFWSRLKQIVPKHDCGCKGSMYNQAESF 296
C Y P DF+ ++ I P + C+ + +SF
Sbjct: 342 CPPNYNPADFYVQMLAIAPAKEAECRDMIKKICDSF 377
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 26.2 bits (55), Expect = 1.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 189 CCTGYRPDDFWSRLKQIVPKHDCGCKGSMYNQAESF 296
C Y P DF+ ++ I P + C+ + +SF
Sbjct: 342 CPPNYNPADFYVQMLAIAPAKEAECRDMIKKICDSF 377
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 26.2 bits (55), Expect = 1.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 189 CCTGYRPDDFWSRLKQIVPKHDCGCKGSMYNQAESF 296
C Y P DF+ ++ I P + C+ + +SF
Sbjct: 320 CPPNYNPADFYVQMLAIAPAKEAECRDMIKKICDSF 355
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.0 bits (52), Expect = 2.6
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Frame = -1
Query: 369 HTDGSTTGLGIGSAVANADFFP----NGGNSQPGCTLSLCNHNRAWELFASTVTRNHLVG 202
+ +GS TG + S +NA NG NS T + N S N
Sbjct: 105 NNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTTTTPTNPGNGNGGSNNNNNSNSS 164
Query: 201 NQCSNMLQVSSNSCRGNRLNMGND 130
+ C+N VSSN+ N G +
Sbjct: 165 SSCNN--HVSSNTNNNGTTNGGGE 186
>AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein.
Length = 391
Score = 24.2 bits (50), Expect = 4.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 304 ERWKLSAWLYIEPLQPQSCLGTICFNRDQKS 212
+R L AW +EPLQ ++ T+ R +++
Sbjct: 130 KRQVLDAWKALEPLQKEAYRSTLASGRIERA 160
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.8 bits (49), Expect = 6.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 426 WNTNSNRLNARDGVYVEAIHT 364
WN+N+N+++A A+HT
Sbjct: 1663 WNSNNNKMSATSMAASAAMHT 1683
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 23.8 bits (49), Expect = 6.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 413 LIALMQEMGFTLRQSTPMAVQLVLASDLLSPTP 315
LI L++ FT TP + S +LSP P
Sbjct: 465 LITLLRNFRFTPSSQTPAKIVFDPKSFILSPVP 497
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 23.8 bits (49), Expect = 6.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 294 FHRSGRNRRWRQQIRCQDQLYCH 362
F G+N + IRC+D ++ H
Sbjct: 145 FSYKGKNHLINKDIRCKDDVFTH 167
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.4 bits (48), Expect = 8.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 542 NGAPVTLLRNVKNCPKPRPTAGT 610
+GAP T K PKP P++ T
Sbjct: 409 SGAPATAKPTPKPIPKPAPSSET 431
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.4 bits (48), Expect = 8.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 542 NGAPVTLLRNVKNCPKPRPTAGT 610
+GAP T K PKP P++ T
Sbjct: 409 SGAPATAKPTPKPIPKPAPSSET 431
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 898,031
Number of Sequences: 2352
Number of extensions: 20604
Number of successful extensions: 75
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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