Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a13r
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical pr...    31   0.92 
AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...    31   0.92 
AC199170-9|ABO33267.1|  388|Caenorhabditis elegans Hypothetical ...    31   0.92 
Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.    30   1.6  
Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical p...    29   2.8  
AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical ...    29   2.8  
AC006774-3|AAW57825.1|  348|Caenorhabditis elegans Serpentine re...    29   2.8  
Z48809-2|CAA88747.1|  406|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    29   3.7  
Z29561-3|CAD54153.1|  846|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical
           protein F32A7.5c protein.
          Length = 877

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +2

Query: 431 GPAGSKPVTR---ATRPPSSRPALPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCPKPR-P 598
           G   ++P T    ATRP  +RPA+P   APR   +R       P T  RN    P+   P
Sbjct: 239 GKPSARPATTTGTATRP--TRPAVPAASAPRALTSRAPAGPSRPTT-TRNAAPAPRTAVP 295

Query: 599 TAGTPLAAVA*SDRA 643
           +  T L   A + +A
Sbjct: 296 SRATVLTKTAPASKA 310


>Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical
           protein F32A7.5b protein.
          Length = 764

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +2

Query: 431 GPAGSKPVTR---ATRPPSSRPALPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCPKPR-P 598
           G   ++P T    ATRP  +RPA+P   APR   +R       P T  RN    P+   P
Sbjct: 239 GKPSARPATTTGTATRP--TRPAVPAASAPRALTSRAPAGPSRPTT-TRNAAPAPRTAVP 295

Query: 599 TAGTPLAAVA*SDRA 643
           +  T L   A + +A
Sbjct: 296 SRATVLTKTAPASKA 310


>Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical
           protein F32A7.5a protein.
          Length = 878

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +2

Query: 431 GPAGSKPVTR---ATRPPSSRPALPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCPKPR-P 598
           G   ++P T    ATRP  +RPA+P   APR   +R       P T  RN    P+   P
Sbjct: 239 GKPSARPATTTGTATRP--TRPAVPAASAPRALTSRAPAGPSRPTT-TRNAAPAPRTAVP 295

Query: 599 TAGTPLAAVA*SDRA 643
           +  T L   A + +A
Sbjct: 296 SRATVLTKTAPASKA 310


>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +2

Query: 428 RGPAGSKPVTRATRPPSSRPALPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCPKPRPTAG 607
           +G  GS+PV    RP ++ P  P   AP +      V    P T+    +  P P  +AG
Sbjct: 140 KGSTGSRPVAAPARPVAAAPPKPRPAAPAVAAP--AVKASVPPTVRNGTR--PAPATSAG 195

Query: 608 T 610
           T
Sbjct: 196 T 196


>AC199170-9|ABO33267.1|  388|Caenorhabditis elegans Hypothetical
           protein T08D2.8 protein.
          Length = 388

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = +2

Query: 458 RATRPPSSRPA--LPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCP---KPRPTAGTPLAA 622
           R   P S+ P    P+  AP + PTR      APV  +  VK  P   +P P  G P AA
Sbjct: 239 RRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPNFGKPRAA 298

Query: 623 VA 628
           VA
Sbjct: 299 VA 300


>Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical
           protein DY3.7 protein.
          Length = 922

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 20/68 (29%), Positives = 28/68 (41%)
 Frame = +2

Query: 323 ATADPMPRPVVLPSVWIAST*TPSLALRRLELVFHRGPAGSKPVTRATRPPSSRPALPTK 502
           A   P   P   P++ I  T T    L R     HR  AGS P     +P S   + P++
Sbjct: 768 AVHTPSTNPNKPPALNIYQTLTRPGTLIRQHRQRHRAAAGSVPPGPGAQPRSGAASAPSR 827

Query: 503 CAPRLKPT 526
             P  +P+
Sbjct: 828 TTPSARPS 835


>AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.
          Length = 922

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 20/68 (29%), Positives = 28/68 (41%)
 Frame = +2

Query: 323 ATADPMPRPVVLPSVWIAST*TPSLALRRLELVFHRGPAGSKPVTRATRPPSSRPALPTK 502
           A   P   P   P++ I  T T    L R     HR  AGS P     +P S   + P++
Sbjct: 768 AVHTPSTNPNKPPALNIYQTLTRPGTLIRQHRQRHRAAAGSVPPGPGAQPRSGAASAPSR 827

Query: 503 CAPRLKPT 526
             P  +P+
Sbjct: 828 TTPSARPS 835


>Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical
           protein F17A2.13 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 565 KERQELSQTATDSGHSSSCSSIVRQSKSSPVQNNYVH 675
           K+   +S  +++S H S+ SS+ +  K  P  +N+V+
Sbjct: 176 KQESSVSSCSSESSHCSASSSLSKTEKPEPENSNFVN 212


>AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical
           protein F54A3.1 protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
 Frame = +2

Query: 428 RGPAGSKPVTRATRPPSSRPALPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCP---KPRP 598
           R P  S   TR    P +    PT+ AP  K         APV  +  VK  P   +P P
Sbjct: 244 RAPPASAAPTRRAPSPKAPVVAPTRRAPSPK---------APVASVAPVKPKPFVARPAP 294

Query: 599 TAGTPLAAVA 628
           + G P AAVA
Sbjct: 295 SFGKPRAAVA 304


>AC006774-3|AAW57825.1|  348|Caenorhabditis elegans Serpentine
           receptor, class t protein42, isoform b protein.
          Length = 348

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -2

Query: 428 YGTPILIALMQEMGFTLRQSTPMAVQLVLASDLLSPTPISSRTVETLSLVVH 273
           +G P +I L   M  T+R       +  + S  +   PI++RT  T+S+V H
Sbjct: 287 HGCPAIIYLF--MNTTIRSGVSKIFRFKVGSSFVQVKPINTRTTTTVSVVGH 336


>Z48809-2|CAA88747.1|  406|Caenorhabditis elegans Hypothetical
           protein T01E8.4 protein.
          Length = 406

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +3

Query: 210 DDFWSR---LKQIVPKHDCGCKGSMYNQAESFHRSGRNR-RWR 326
           D FWSR    +Q V   DC  K   Y   +SF+   R R RWR
Sbjct: 47  DKFWSRRIRTEQKVRLPDCELKHPEYEPKKSFYAMHRQRDRWR 89


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = +2

Query: 326 TADPMPRPVVLPSVWIAST*TPSLALRRLELVFHRGPAGSKPVTRATRPPSSRPALPTKC 505
           T +P+P P +       +T +P  +    EL+    P  S PV   T PP  R   P + 
Sbjct: 503 TPEPLPSPTITDVSLAIATPSPEESDDDQELILP-SPEPS-PVREPTPPPPPREPTPREP 560

Query: 506 APRLKPTR 529
            P  +P R
Sbjct: 561 TPEPEPVR 568


>Z29561-3|CAD54153.1|  846|Caenorhabditis elegans Hypothetical
           protein R10E12.1c protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = +2

Query: 437 AGSKPVTRATRPPSSRPALPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCPKPRPTAGTP 613
           A   P     RPP  RPA P+  +P   P     + G P  + +     P+ +PT   P
Sbjct: 746 AAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQGQPQPMFQ-----PQYQPTFAAP 799


>Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical
           protein C36A4.5 protein.
          Length = 954

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
 Frame = +2

Query: 434 PAGSKPVTRA---TRPPSSRPALPTKCAPRLKPTRCMVLNGAPVT---LLRNVKNCPKPR 595
           P   KP TR+   T    +RPA+P   APR   +R       P T        +    PR
Sbjct: 316 PVAGKPSTRSASTTGAARTRPAIPAVSAPRALTSRAPTGPACPTTTRSAAPATRTAVPPR 375

Query: 596 PTAGTPLAAVA 628
            TA  P AA A
Sbjct: 376 ATA-PPKAASA 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,499,248
Number of Sequences: 27780
Number of extensions: 460631
Number of successful extensions: 1494
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)