Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a13f
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   4.9  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   4.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 219  TETLPTTSTYSSPGAIVVPP 278
            T T PTT+ + + G  + PP
Sbjct: 1070 TTTRPTTTNWPTQGTTIPPP 1089



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 467 TEQVFSSPKQLRSRQICR 414
           +E +FS PK   +  +CR
Sbjct: 562 SEGIFSDPKNCAAYYVCR 579


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 386 INPTIRDAYLGKSDVNVIVL 445
           ++  ++DA +GKS V+ IVL
Sbjct: 145 VDKVLQDAKIGKSAVHEIVL 164


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 386 INPTIRDAYLGKSDVNVIVL 445
           ++  ++DA +GKS V+ IVL
Sbjct: 145 VDKVLQDAKIGKSAVHEIVL 164


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 185 LQDLLCADFHHRPAFQCNEGN 123
           L D LC  F  + +  C  GN
Sbjct: 31  LLDALCQSFRKQNSSSCGNGN 51


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 343 CCYCSWLAQQP 375
           C Y SW AQ+P
Sbjct: 27  CYYASWGAQRP 37


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 309 TELALLIVNVWEERRLRLVKSRYW 238
           T+L+  I NV++       K +YW
Sbjct: 57  TDLSYFISNVYQILAYNFWKKKYW 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,529
Number of Sequences: 336
Number of extensions: 3370
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)