Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a10f
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 41 6e-04
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 41 6e-04
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 38 0.004
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 38 0.004
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 36 0.017
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 36 0.022
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 36 0.022
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z77666-11|CAJ76930.1| 142|Caenorhabditis elegans Hypothetical p... 29 3.4
Z77666-10|CAB01231.1| 176|Caenorhabditis elegans Hypothetical p... 29 3.4
U88165-9|AAK21394.1| 280|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 5.9
U28929-1|AAN63410.1| 418|Caenorhabditis elegans Hypothetical pr... 28 5.9
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 28 5.9
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 28 5.9
AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical ... 27 7.9
AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical... 27 7.9
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 279 SSAPLLEDVQLTANAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDV 458
SS +L+D +T + G + TC +C + VDC GLT PT L
Sbjct: 230 SSIEILQDKFMTCS--GNRKRRYKKTCETAEICPLPCTCTGTTVDCRDSGLTYVPTNLPP 287
Query: 459 RTTILNLQNNKLTGIP 506
TT + L+ N+++ IP
Sbjct: 288 STTEIRLEQNQISSIP 303
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 STCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGI-PKDVAS 521
+TCP CVC V C G LTE P + T L+LQ+N++T I P D +S
Sbjct: 15 ATCPAECVCVDR------TVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSS 66
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 336 TQSGDST-CPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIP 506
T S DS CP C C VV CS LT FP+ + TT L L N + IP
Sbjct: 669 TCSDDSNLCPPKCSCLDR------VVRCSNKNLTSFPSRIPFDTTELYLDANYINEIP 720
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 348 DSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGI 503
DS CP C C+ VDC+ GL PT + T L L N ++ +
Sbjct: 482 DSICPTQCDCY------GTTVDCNKRGLNTIPTSIPRFATQLLLSGNNISTV 527
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 279 SSAPLLEDVQLTANAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDV 458
SS +L+D +T + G + TC +C + VDC GLT PT L
Sbjct: 230 SSIEILQDKFMTCS--GNRKRRYKKTCETAEICPLPCTCTGTTVDCRDSGLTYVPTNLPP 287
Query: 459 RTTILNLQNNKLTGIP 506
TT + L+ N+++ IP
Sbjct: 288 STTEIRLEQNQISSIP 303
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 STCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGI-PKDVAS 521
+TCP CVC V C G LTE P + T L+LQ+N++T I P D +S
Sbjct: 15 ATCPAECVCVDR------TVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSS 66
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 336 TQSGDST-CPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIP 506
T S DS CP C C VV CS LT FP+ + TT L L N + IP
Sbjct: 669 TCSDDSNLCPPKCSCLDR------VVRCSNKNLTSFPSRIPFDTTELYLDANYINEIP 720
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 348 DSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGI 503
DS CP C C+ VDC+ GL PT + T L L N ++ +
Sbjct: 482 DSICPTQCDCY------GTTVDCNKRGLNTIPTSIPRFATQLLLSGNNISTV 527
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +3
Query: 342 SGDSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPKDVAS 521
SG +C C C T+ + C G L P LD RTT+L+L NN+++ + D S
Sbjct: 13 SGVISCQSGCKCPTKTTAV-----CKGSSLRSIPILLDPRTTVLDLSNNRISRLSADELS 67
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +3
Query: 342 SGDSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPKDVAS 521
SG +C C C T+ + C G L P LD RTT+L+L NN+++ + D S
Sbjct: 13 SGVISCQSGCKCPTKTTAV-----CKGSSLRSIPILLDPRTTVLDLSNNRISRLSADELS 67
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 36.3 bits (80), Expect = 0.017
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 357 CPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKL 494
CP C C D VVDCS GLT P + L ++NN++
Sbjct: 23 CPVECTC----DKKGLVVDCSSSGLTRIPKNISRNVRSLVIRNNRI 64
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 372 VCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPK 509
+CH G+ VVDCS L+E PT + T IL L +N++ I K
Sbjct: 28 LCHCVGN----VVDCSSLDLSEIPTTIPNNTRILLLSDNEIESIDK 69
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 372 VCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPK 509
+CH G+ VVDCS L+E PT + T IL L +N++ I K
Sbjct: 28 LCHCVGN----VVDCSSLDLSEIPTTIPNNTRILLLSDNEIESIDK 69
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 31.1 bits (67), Expect = 0.64
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 351 STCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPK 509
+ CP C C + V C G LT P + + TT L NN L + K
Sbjct: 15 TACPSECRC------AGLDVHCEGKNLTAIPGHIPIATTNLYFSNNLLNSLSK 61
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 31.1 bits (67), Expect = 0.64
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 351 STCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPK 509
+ CP C C + V C G LT P + + TT L NN L + K
Sbjct: 15 TACPSECRC------AGLDVHCEGKNLTAIPGHIPIATTNLYFSNNLLNSLSK 61
>Z77666-11|CAJ76930.1| 142|Caenorhabditis elegans Hypothetical
protein K08E7.8b protein.
Length = 142
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +3
Query: 426 GLTEFPTPLDVR---TTILNLQNNKLTGIPKDVAS 521
G +FP ++ TILN+ NN+++ IP++VA+
Sbjct: 25 GFKKFPKKFVIKFPTATILNMANNEISEIPEEVAT 59
>Z77666-10|CAB01231.1| 176|Caenorhabditis elegans Hypothetical
protein K08E7.8a protein.
Length = 176
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +3
Query: 426 GLTEFPTPLDVR---TTILNLQNNKLTGIPKDVAS 521
G +FP ++ TILN+ NN+++ IP++VA+
Sbjct: 59 GFKKFPKKFVIKFPTATILNMANNEISEIPEEVAT 93
>U88165-9|AAK21394.1| 280|Caenorhabditis elegans Hypothetical
protein F54C1.6 protein.
Length = 280
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 141 IKSDETPIPVETDNQFPPETNSE 209
I+ ET + VE DN+ PE NSE
Sbjct: 185 IEPSETSLKVEPDNEIVPEVNSE 207
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 EDVQLTA-NAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCS--GYGLTEFPTPLDVRTT 467
EDV +A N G Q+ S C EG S + C+ G LTEFP +
Sbjct: 178 EDVFCSATNRRGVNWQNTKSGTTSSAPC-PEGSSGKQLWACTEEGQWLTEFPNSAGCESN 236
Query: 468 ILNLQNNKLTGI 503
++ +N+ L+G+
Sbjct: 237 WISSRNSVLSGV 248
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 EDVQLTA-NAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCS--GYGLTEFPTPLDVRTT 467
EDV +A N G Q+ S C EG S + C+ G LTEFP +
Sbjct: 180 EDVFCSATNRRGVNWQNTKSGTTSSAPC-PEGSSGKQLWACTEEGQWLTEFPNSAGCESN 238
Query: 468 ILNLQNNKLTGI 503
++ +N+ L+G+
Sbjct: 239 WISSRNSVLSGV 250
>U28929-1|AAN63410.1| 418|Caenorhabditis elegans Hypothetical
protein F09C12.2 protein.
Length = 418
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -2
Query: 502 IPVSLLFCKFSIVVRTSKGVGNSVSPYPEQSTTKLLESPSV--WHT 371
+P + +F SI R +SP+ S +LLE P V WHT
Sbjct: 302 LPFTAMFPNASIEARNIVSKMLQISPWKRFSAEQLLEEPFVKHWHT 347
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 EDVQLTA-NAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCS--GYGLTEFPTPLDVRTT 467
EDV +A N G Q+ S C EG S + C+ G LTEFP +
Sbjct: 178 EDVFCSATNRRGVNWQNTKSGTTSSAPC-PEGSSGKQLWACTEEGQWLTEFPNSAGCESN 236
Query: 468 ILNLQNNKLTGI 503
++ +N+ L+G+
Sbjct: 237 WISSRNSVLSGV 248
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 EDVQLTA-NAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCS--GYGLTEFPTPLDVRTT 467
EDV +A N G Q+ S C EG S + C+ G LTEFP +
Sbjct: 180 EDVFCSATNRRGVNWQNTKSGTTSSAPC-PEGSSGKQLWACTEEGQWLTEFPNSAGCESN 238
Query: 468 ILNLQNNKLTGI 503
++ +N+ L+G+
Sbjct: 239 WISSRNSVLSGV 250
>AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical
protein Y76A2B.2 protein.
Length = 782
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 342 SGDSTCPKPCVCH 380
SG +TCP+ C+CH
Sbjct: 21 SGLTTCPRQCICH 33
>AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical
protein Y41C4A.13 protein.
Length = 103
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 300 DVQLTANAEGTATQSGDSTCPKPCVCHTEGDSSNF 404
DV+ N E T T+ GD+ CP P V G SS F
Sbjct: 22 DVKSAVN-EVTTTKDGDTYCPVPLVGTKCGTSSIF 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,107,678
Number of Sequences: 27780
Number of extensions: 225307
Number of successful extensions: 683
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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