Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a09f
(635 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 42 7e-05
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 41 2e-04
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 37 0.003
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 36 0.004
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 36 0.005
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 34 0.015
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 33 0.026
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 33 0.035
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 33 0.046
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 31 0.11
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 30 0.24
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 29 0.43
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.43
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 28 1.3
SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 27 1.7
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 27 2.3
SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|c... 27 3.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.0
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 25 6.9
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 25 6.9
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 25 6.9
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 25 6.9
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 25 6.9
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 25 6.9
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 25 9.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 9.1
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 25 9.1
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 25 9.1
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 41.9 bits (94), Expect = 7e-05
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 AISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSAT-CDFRMTSAD--KGWLTAAP 426
A++ GFGR+ + L V G + + I S +L D A+ +LT +
Sbjct: 68 AMNEIGFGRYQWYLFFVAGFGWMSDNIWPVCTSLILMRLDEVDGPHPPAEGRAPYLTLSQ 127
Query: 427 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIIS 540
LG+++G+ W ADT GR+ T L GV +I+
Sbjct: 128 NLGLLVGAMVWSLSADTIGRRWAFNLTFLFTGVFAVIA 165
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 40.7 bits (91), Expect = 2e-04
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +1
Query: 304 VTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKG 483
+ GL++ I+ V+ ++ +T+ K ++T+A LG ++G G LAD G
Sbjct: 96 IGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFG 155
Query: 484 RKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGI 618
RK V+ + ++ I+ S VQ+ + V F + +GI
Sbjct: 156 RKPVIA----IASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGI 196
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 427 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGF 594
MLG +G W +++ GRK L L L V I + Q + M CRF G+
Sbjct: 184 MLGYCLGPICWAPMSEITGRKTPLYIGLFLFSVFQIAVATAQDIQTIMICRFFGGY 239
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 36.3 bits (80), Expect = 0.004
Identities = 25/111 (22%), Positives = 48/111 (43%)
Frame = +1
Query: 286 HFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGC 465
H LLA T L A+ + + + +A +T A G + + G G W
Sbjct: 99 HVALLAFTTLT-ASWGSSVFSAAATIFAAKYHIGLTVALLGM--SLYVCGFASGPILWAP 155
Query: 466 LADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGI 618
+++ GRK+ L+ + + + I + + + M CRF +GF + + +
Sbjct: 156 ISELVGRKIPLIVGMFMFSIFSIAVAVAKDVQTVMICRFFSGFCASSPLSV 206
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +1
Query: 427 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 606
+ G + G W L++ GRK+ L+ + G+ I + + + M CRF +GF +
Sbjct: 180 LCGYIAGPIVWAPLSELSGRKLPLLIGMFGFGIFNISVAVAKDIQTIMMCRFFSGFFASA 239
Query: 607 AMGI 618
+ +
Sbjct: 240 PLTV 243
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 34.3 bits (75), Expect = 0.015
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +1
Query: 319 YANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVL 498
Y +G+ + V+P ATC + +T +P+LG++ W +A +G K +
Sbjct: 426 YLYLLMGVLVCPAVVP-ATCVMLFSRVSTIAVTVSPVLGIISSIITWLVVARAEGGKTLT 484
Query: 499 VST------LLLDGVVGIISSFVQIL 558
+ T +L VVG++S + IL
Sbjct: 485 IETTGANNPMLAGNVVGLLSPALYIL 510
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 33.5 bits (73), Expect = 0.026
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 427 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 606
+LG G W L++ GRK ++ +L G+ I + + + M CRF GF +
Sbjct: 181 LLGYCSGPIIWAPLSELSGRKPPILIGMLGFGIFNISVAVGKDIQTIMMCRFFAGFFASA 240
Query: 607 AMGI 618
+ +
Sbjct: 241 PLTV 244
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 33.1 bits (72), Expect = 0.035
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Frame = +1
Query: 286 HFCLLAVTGLI-----YANTAIG--ITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVI 444
HF +AV G+ Y + +IG ITI+ + P T + D G + +G ++
Sbjct: 75 HFLNVAVAGVALMSDGYCSNSIGTVITILRKLYPEETTHNKSLQ-DIGMIA---YVGTIV 130
Query: 445 GSYFWGCLADTKGRK--------VVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAV 600
G +G +D GRK +++VST L G G S +L +A RF G +
Sbjct: 131 GQLSFGWYSDRFGRKNGMITATIILIVSTALCTGAYGYKGSINGMLSALIAYRFFLGIGI 190
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 32.7 bits (71), Expect = 0.046
Identities = 22/96 (22%), Positives = 43/96 (44%)
Frame = +1
Query: 331 AIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTL 510
A+ T+++ +P+ + S+ W+ A L F G +++ GRK+VL +++
Sbjct: 104 ALDQTVITTAIPTIVANLDGGSS-YSWIGTAYSLAETSILPFCGIMSEVVGRKIVLYTSI 162
Query: 511 LLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGI 618
+L + Q + + CR V G G M +
Sbjct: 163 VLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGIMSL 198
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 31.5 bits (68), Expect = 0.11
Identities = 21/93 (22%), Positives = 42/93 (45%)
Frame = +1
Query: 328 TAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVST 507
+A+ T+++ +P+ + S+ W+ A L F G +++ GRK+VL ++
Sbjct: 103 SALDQTVITTAIPTIVANLDGGSS-YSWIGTAYTLAQTSILPFCGIMSEVVGRKIVLYTS 161
Query: 508 LLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 606
++L + Q + + CR V G G
Sbjct: 162 IVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGG 194
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 30.3 bits (65), Expect = 0.24
Identities = 25/123 (20%), Positives = 56/123 (45%)
Frame = +1
Query: 232 EHGADFEAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGW 411
E+G FEA ++ + ++GL++ G+ + + + ++S K
Sbjct: 67 ENGEGFEAEKISSWIWVLS-AVAGISGLLFGYDT-GVISGALAVLGSDLGHVLSSGQKEL 124
Query: 412 LTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNG 591
+T+A +I + G LAD GRK +L+ + + +I + + + + + RF+ G
Sbjct: 125 ITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVG 184
Query: 592 FAV 600
+ +
Sbjct: 185 YGI 187
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/99 (21%), Positives = 38/99 (38%)
Frame = +1
Query: 298 LAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADT 477
+AV G G +I S +P F + + +LG G W + +
Sbjct: 77 VAVMGSACLCAGFGSSIFSGAVPEVMVKFHVCRTVALLGISLYVLGFASGPVVWAPMCEL 136
Query: 478 KGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGF 594
GR+ ++ + + + I + + + M CRF GF
Sbjct: 137 FGRRRPMIIAVFIFCIFHIAVATAKDIQTVMICRFFCGF 175
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.43
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
++ P+T+L A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2564 SSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTS-TPITSSTVVNSSTPIT-SSTA 2621
Query: 422 AAVSQPL-SAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
S P+ S+ V+ S ST T + +VL +P+T+S
Sbjct: 2622 LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSS 2667
Score = 29.5 bits (63), Expect = 0.43
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
T+ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2768 TSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS-TPITSSTVVNSSTPITSSTVL 2826
Query: 422 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
+ + S+ V+ S ST T + +VL +P+T+S
Sbjct: 2827 NSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2871
Score = 28.3 bits (60), Expect = 0.98
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
T+ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 1124 TSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS-TPITSSTVVNSSTPITSSTVV 1182
Query: 422 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
+ S+ V+ S ST + T + VL +P+T+S
Sbjct: 1183 NTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSS 1227
Score = 27.5 bits (58), Expect = 1.7
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
T+ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2360 TSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 2418
Query: 422 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
+ S+ V+ S S+ + T + V+ +P+T+S
Sbjct: 2419 NTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSS 2463
Score = 27.5 bits (58), Expect = 1.7
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2636 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 2694
Query: 422 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
+ S+ V+ S ST T + +VL +P+T+S
Sbjct: 2695 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2739
Score = 27.5 bits (58), Expect = 1.7
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2864 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 2922
Query: 422 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
+ S+ V+ S ST T + +VL +P+T+S
Sbjct: 2923 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2967
Score = 27.1 bits (57), Expect = 2.3
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2960 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 3018
Query: 422 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
+ S+ V+ S ST T + VL +P+T+S
Sbjct: 3019 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSS 3063
Score = 25.8 bits (54), Expect = 5.2
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 1292 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 1350
Query: 422 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
+ + S+ V+ S ST T + V+ +P+T+S
Sbjct: 1351 NSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSS 1395
Score = 25.8 bits (54), Expect = 5.2
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 1964 SSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTS-TPITSSSVLNSSTPITSSTVV 2022
Query: 422 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 297
+ S+ V+ S ST T + +VL +P+T+S
Sbjct: 2023 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2067
Score = 25.0 bits (52), Expect = 9.1
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMIPT-TPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
T+ P+T+ +N T+ ++ T TP +S N++ P S+ P+T ++
Sbjct: 1196 TSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS-TPITSSSILNSSTPITSSSVL 1254
Query: 422 AAVSQPLSAEVMRKSHVADGSTNDTIVIPM---AVLA*ISPVTAS 297
+ + S+ V+ S ST IP+ +VL +P+T+S
Sbjct: 1255 NSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSSTPITSS 1299
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +1
Query: 427 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 606
++G+++G + L++ GR+ + + L ++ I ++ L +F+ RF +GF +
Sbjct: 85 VIGVMLGPLIFSPLSELYGRRPLNIFGYTLFALMQIPTALSVNLAMFVVFRFFSGFFGSV 144
Query: 607 AMGI 618
+GI
Sbjct: 145 GLGI 148
>SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 537
Score = 27.5 bits (58), Expect = 1.7
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 427 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 606
++G G G ++D GRK V V +L+L + I + LP+ MA +N A+AG
Sbjct: 135 IVGNAFGPMLLGPMSDIFGRKWVYVGSLILYIIFQIPQALAYNLPM-MA---INS-AIAG 189
Query: 607 AMG 615
A G
Sbjct: 190 AFG 192
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 27.1 bits (57), Expect = 2.3
Identities = 24/103 (23%), Positives = 43/103 (41%)
Frame = +1
Query: 313 LIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKV 492
LI G ++ S + + + DF ++ + + ++G GS + L+ GR V
Sbjct: 107 LIAFVVTFGSSVYSSGIGNVSMDFGVSISVSSLGSCVFLVGFGFGSLPFAPLSGIYGRFV 166
Query: 493 VLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGIC 621
V TLL+ + I Q + + RF GF + + C
Sbjct: 167 VYFCTLLMFTLFQIGGGCAQNIWTLVILRFFQGFFGSTPLSNC 209
>SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|chr
3|||Manual
Length = 222
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 449 EPMTIPNIGAAVSQPLSAEVMRKSHVADGSTNDTIVIPMAVL 324
E TIP S+P +VM S VAD T + IP +L
Sbjct: 35 EEATIPQSLVKTSRPADHKVMEASKVADTRTAWSTKIPAVLL 76
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = -1
Query: 602 ATAKPLTNLQAMNMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 423
+++ P +++ + M + ++ IPT+ SS + TT+ +S+ P T ++
Sbjct: 522 SSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSS----IPSTFSSVS 577
Query: 422 AAVSQPLSAEVMRKSHVADGSTNDT 348
+ +S S+ ++ ST+ T
Sbjct: 578 SILSSSTSSPSSTSLSISSSSTSST 602
Score = 25.4 bits (53), Expect = 6.9
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -1
Query: 527 TTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVADGSTN 354
T P+S+RV T T S KQP T ++VS P S+ V +S S++
Sbjct: 437 TQPASTRVQTTTVSSISTSVKQP------TASVASSSVSVPSSSSVQPQSSTPISSSS 488
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 6.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 431 WVWSLVHISGVAWLIQRAVRLY 496
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -1
Query: 527 TTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKS 378
T P + +T + F+SA +K PM I + +P S + R +
Sbjct: 49 TVPRTVLGGKSTNISKFISAPSTKKMSPMDISMDSPTILEPNSQGISRSA 98
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 6.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 431 WVWSLVHISGVAWLIQRAVRLY 496
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 25.4 bits (53), Expect = 6.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 431 WVWSLVHISGVAWLIQRAVRLY 496
W+W+ +H S + + Q+ + LY
Sbjct: 86 WIWTCLHFSKIIFPAQKVICLY 107
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 25.4 bits (53), Expect = 6.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 176 YFKSETPSENNRKW 217
YF TP E NRKW
Sbjct: 7 YFFGPTPQEQNRKW 20
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 6.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 431 WVWSLVHISGVAWLIQRAVRLY 496
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -1
Query: 524 TPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKS 378
TPSS + T RPFV Q + I NI + +++R S
Sbjct: 114 TPSSEKSTTERESRPFVPPNSQQMRRMLFIGNIPKELDDFWMDKILRLS 162
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.0 bits (52), Expect = 9.1
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = -1
Query: 623 KQIPIAPATAKPLTNLQAMNMGKIWTNDEM--IPTTPSSSRVDTNTTLRPFVSAKQPQKY 450
KQI + P+ P ++ G + + E PTTP ++ T L P + P K
Sbjct: 263 KQISVQPSE-HPKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKK 321
Query: 449 EPMTIPNIGAAVSQPLSA 396
+ + A + LSA
Sbjct: 322 PVSELEELHTAGNVNLSA 339
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 130 LVGAYHRHRKRHLGMRVRHRGYRERRLGDRSKD 32
LV H + +R+ H+G RLG R+KD
Sbjct: 422 LVACQTNHAVDQILIRLLHQGASVMRLGSRTKD 454
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 593 KPLTNLQAMNMGKIWTNDEMIPTT--PSSSRVDTNTTLRP 480
KP TNL ++ + +DE+ P++ P +D++ ++ P
Sbjct: 64 KPSTNLGSLKTSSLLASDEVFPSSVMPQLRPLDSSLSVSP 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,787,847
Number of Sequences: 5004
Number of extensions: 58121
Number of successful extensions: 194
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -