Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a09f
(635 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05) 48 5e-06
SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15) 45 6e-05
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 44 1e-04
SB_55040| Best HMM Match : TatC (HMM E-Value=0.59) 42 4e-04
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 39 0.003
SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015) 39 0.004
SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06) 38 0.007
SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5) 36 0.036
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 34 0.084
SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024) 34 0.11
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 32 0.45
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 32 0.45
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 31 0.59
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 31 0.59
SB_58895| Best HMM Match : SRCR (HMM E-Value=0) 31 0.78
SB_53568| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.61) 31 0.78
SB_26344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.78
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 28 5.5
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 28 5.5
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022) 28 7.3
SB_25852| Best HMM Match : Herpes_capsid (HMM E-Value=7) 28 7.3
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 27 9.7
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_17091| Best HMM Match : DUF931 (HMM E-Value=8.3) 27 9.7
>SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05)
Length = 457
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 400 DKGWLTAAPM----LGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIF 567
D+G+L A +GM+IGS G ++D GRK L + L GV G+ S+ V + F
Sbjct: 71 DRGYLGATLQSCFFVGMLIGSLVCGVISDAWGRKKCLFISYTLLGVAGVGSACVDCVSFF 130
Query: 568 MACRFVNGFAVAGAMGICFPYL 633
RFV GF + G M + YL
Sbjct: 131 AFLRFVVGFGLTGVMLSEYVYL 152
>SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15)
Length = 839
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 403 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRF 582
K A M G+++GS + ++D GR++ + ++ L V G S F L +F+ RF
Sbjct: 118 KALTQAMYMAGLLVGSLVFSAVSDRFGRRIGVFISIALLAVCGTTSGFSNCLSLFILLRF 177
Query: 583 VNGFAVAGAM 612
V G A AG +
Sbjct: 178 VTGMANAGCL 187
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +1
Query: 412 LTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNG 591
L + +GM+ GS+ G ++D GRK L + G+ S+ V + F RF+ G
Sbjct: 113 LQSVYFIGMLFGSFLTGMVSDAWGRKNCLFLFTGIMLAAGVASALVDCVSFFAFLRFLVG 172
Query: 592 FAVAGAMGICFPYL 633
F ++GAM F YL
Sbjct: 173 FGLSGAMLSQFIYL 186
>SB_55040| Best HMM Match : TatC (HMM E-Value=0.59)
Length = 275
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = +1
Query: 433 GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAM 612
GM+IGS G ++D GRK + L V G+ FV + F RFV G AGAM
Sbjct: 121 GMLIGSLVSGLISDAWGRKKCFYLSYALMVVAGVSCVFVDCISFFAFLRFVVGAGTAGAM 180
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 409 WLTAAPML-GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFV 585
W T + M G + G+ +G L+D GR+ VL + + V SSFV ++ RF
Sbjct: 94 WATNSIMFTGWLFGNIVFGILSDKYGRRKVLFISSCMVCWVAFASSFVPYYWLYAVFRFF 153
Query: 586 NGFAVAGAMGICF 624
GF + G++ I F
Sbjct: 154 IGFGLGGSIVILF 166
>SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015)
Length = 292
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 418 AAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFA 597
A M G+++GS + ++D GR++ + ++ L GI+S L +F RF G A
Sbjct: 4 AVYMAGLLVGSVTFSSISDHFGRRLSMFLSIFLMAACGIVSGVSDCLSMFALFRFGAGAA 63
Query: 598 VAGAM 612
AG +
Sbjct: 64 CAGCL 68
>SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06)
Length = 624
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 433 GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAM 612
GM +GS G ++D GR++ + + + + G+ +SF L + RF GF++A M
Sbjct: 66 GMAVGSLLGGLISDAFGRRLCMFLSCGILVISGVAASFADCLSLLGLLRFCIGFSLASFM 125
Query: 613 GICFPYL 633
+ Y+
Sbjct: 126 LSSYIYM 132
>SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5)
Length = 563
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 250 EAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPM 429
E AI G+G F LL + G + ++ ITI++ + P+ C++ +++ + +T +
Sbjct: 53 EDAIDRLGYGLFQIKLLLMIGFAWMADSMEITILAIMCPAIRCEWNLSTWAEALITTVTL 112
Query: 430 L 432
L
Sbjct: 113 L 113
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 34.3 bits (75), Expect = 0.084
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 412 LTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNG 591
L A GMV+GS G L+D GRK + + ++ + SSFV F RFV G
Sbjct: 104 LQACDFSGMVLGSLISGNLSDRLGRKKWCLYSAIILLISSTSSSFVDCPSFFAFLRFVVG 163
Query: 592 FA 597
+
Sbjct: 164 MS 165
>SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024)
Length = 625
Score = 33.9 bits (74), Expect = 0.11
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 226 FLEHGADFEAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADK 405
FL F+ +I GFG +F + T+ IT L + D S +
Sbjct: 33 FLASLIAFQFSILVFGFGTPNFSCTTPANVTCEITSAAIT----ALGTRLLDPSRASCLR 88
Query: 406 GWLTAAPMLGMVIGSYFWGCLADTKGRK---VVLVSTLLLDGVVGIISSFVQIL 558
+ + GM++GS+ G ++D GRK V +TL+L V ++ V L
Sbjct: 89 ALVQSMFFAGMLVGSFVSGPVSDIYGRKCCSFVFTATLILGAAVSVVVDCVSFL 142
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 430 LGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGA 609
+G + GS G L+D GRK+ L ++ L I +SFV + F G ++A +
Sbjct: 63 VGYLFGSLLSGTLSDAFGRKISLTVSVALQAAAFIGASFVTSHTALIILIFFAGLSIASS 122
Query: 610 M 612
+
Sbjct: 123 I 123
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 430 LGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGA 609
+G + GS+ G ++D GRK+ L ++ L I +SFV + F G ++A +
Sbjct: 154 VGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILLFFAGLSLASS 213
Query: 610 M 612
+
Sbjct: 214 I 214
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 433 GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAM 612
GM+IGS G +D GR++ L+ + ++ + F + RF GFA+A M
Sbjct: 124 GMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVGFALASVM 183
Query: 613 GICFPYL 633
+ Y+
Sbjct: 184 VCQYVYV 190
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 433 GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAM 612
GM+IGS G +D GR++ L+ + ++ + F + RF GFA+A M
Sbjct: 637 GMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVGFALASVM 696
Query: 613 GICFPYL 633
+ Y+
Sbjct: 697 VCQYVYV 703
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 430 LGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGA 609
+G + GS+ G ++D GRK+ L ++ L I +SFV + F G ++A +
Sbjct: 157 VGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILIFFAGLSLASS 216
Query: 610 M 612
+
Sbjct: 217 I 217
>SB_58895| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1838
Score = 31.1 bits (67), Expect = 0.78
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = -1
Query: 635 PRYGKQIPIAPATAKPLTNLQAMNMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVSAKQPQ 456
P G+ + P T + +TN Q M K TN I ++++ TN + QP
Sbjct: 120 PMTGEAMTNQPMTGEAMTN-QPMTE-KTMTNQPTIEK--ATNQPMTNQPMTEESMTNQPM 175
Query: 455 KYEPMTIPNIG--AAVSQPLSAEVMRKSHVADGSTN 354
E MT I A +QP++ E M+ + + +TN
Sbjct: 176 TEEAMTSQLITEEAMTNQPMTEEAMKNEQMTEEATN 211
>SB_53568| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.61)
Length = 375
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -2
Query: 166 YEITLTRYMAKSLVGAYHRHRKRHLGMRVRHRGYRERRLGDRSKDAACCLLRLQC 2
Y+ +T Y K G +H HR++H R H + RRL + K C + +++C
Sbjct: 205 YKNKMTCYKEKREQGRHHGHRRKH--HRPHHHRHHHRRLPEYLK--KCMIEKVKC 255
>SB_26344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 382 FRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLV 501
F + A G+ A+ +LG IG++ G L D GR+ VL+
Sbjct: 32 FNSSEAALGFEVASMLLGCAIGAFLAGWLGDRLGRRGVLI 71
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -1
Query: 599 TAKPLTNLQAMNMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVSAKQ 462
TAKP TN N K TN+ PTT ++S+ TN +P + K+
Sbjct: 3119 TAKPTTN----NNSKPTTNNNSKPTTNNNSKPTTNNNSKPTTNNKK 3160
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 313 LIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAP 426
+IY NT+ G+ + + ATC R T A KG++ A P
Sbjct: 378 IIYDNTSYGVCVPNPCANGATCRKR-TGASKGFICACP 414
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 42 RSPRRRSLYPRWRTRIPKCRLR 107
RSPR+RS PR R+R P+ R R
Sbjct: 209 RSPRKRSRTPRKRSRSPRKRSR 230
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = +1
Query: 385 RMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPI 564
++T + W ++ LG ++G+ G + GRK +++ + V ++ ++ +
Sbjct: 81 KLTVSQGSWFSSLVTLGAILGAPLGGWTLEYFGRKGTIMACAVPFEVGWMLIAYANSHYM 140
Query: 565 FMACRFVNGFAVAGAMGICFP 627
RF+ G AV G + + P
Sbjct: 141 LYIGRFITGLAV-GMVSLTVP 160
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 253 AAISATGFGRFHFCLLAVTGLIYANTAIGITIV 351
A +S G+G HFC +A G + I + IV
Sbjct: 2584 AGLSTEGYGNNHFCWMATDGTLIWTFTIPVMIV 2616
>SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022)
Length = 453
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +1
Query: 433 GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAM 612
GM++GS G +D GR++ L+ + ++ ++F L + RF G A M
Sbjct: 125 GMLVGSMVGGWASDRFGRRLCLLVGSAIMLILSFGTAFADCLSLLAFLRFGVGVAHVSVM 184
Query: 613 GICFPYL 633
+ Y+
Sbjct: 185 VCQYVYV 191
>SB_25852| Best HMM Match : Herpes_capsid (HMM E-Value=7)
Length = 284
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Frame = -1
Query: 617 IPIAPATAKPLTNLQAMNMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVSAKQ-PQKYEPM 441
I I + +P L+ + ++T + P+ +S +N +L F +A + P + P+
Sbjct: 157 INIPLSAIRPQQMLKRVLSPAVFTQEHSTPSNSDNSNGKSNDSLFGFGTAMESPLTFSPI 216
Query: 440 TI---PNIGAAVSQPLSAEVMRKSHVADGSTNDTIVIPMAVLA*ISPVTASRQKWKRPKP 270
P + ++++ P + + S + + + + + P A +QK K+PKP
Sbjct: 217 VTTANPVVASSIASPTGSTLSVTSLSSTSPGKRKLQLRLFDVPLEKP--AKKQKKKKPKP 274
Query: 269 V 267
V
Sbjct: 275 V 275
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/56 (21%), Positives = 28/56 (50%)
Frame = +1
Query: 256 AISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAA 423
A+ + G+G + L ++ A+ IT++S ++P C++ ++ +T A
Sbjct: 90 AVESAGYGWYQLRLGIISSFQRVADAMEITMLSILVPYVKCEWDLSIVQVAMITTA 145
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = -3
Query: 444 NDHTQHRRGCKPALVRRSHAEITCRRR*HERHYCDSNGGVSVDQPRDRKQAKVEATETRS 265
ND T+ R KP +RRS + + R R S G + R + + +RS
Sbjct: 621 NDPTRGRHIFKPGSLRRSRSRTSLSSRSRSRDRGGSRRGKRRSRSRSSSYSSRSRSRSRS 680
Query: 264 RNGG 253
R+ G
Sbjct: 681 RDRG 684
>SB_17091| Best HMM Match : DUF931 (HMM E-Value=8.3)
Length = 193
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 436 MVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQI 555
+V+G + G L G VV+V +L+ VVG++ FV I
Sbjct: 117 VVVGVFVVGALVVVVGLIVVVVVNVLVVVVVGVVVVFVDI 156
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,700,066
Number of Sequences: 59808
Number of extensions: 476481
Number of successful extensions: 1447
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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