Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a09f
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13050.1 68416.m01626 transporter-related low similarity to a... 67 1e-11
At5g17010.1 68418.m01992 sugar transporter family protein simila... 38 0.006
At5g13740.1 68418.m01599 sugar transporter family protein contai... 36 0.030
At3g43790.3 68416.m04680 transporter-related low similarity to S... 36 0.030
At3g43790.2 68416.m04679 transporter-related low similarity to S... 36 0.030
At3g43790.1 68416.m04678 transporter-related low similarity to S... 36 0.030
At1g73220.1 68414.m08474 sugar transporter family protein contai... 36 0.030
At1g79360.1 68414.m09248 transporter-related low similarity to S... 35 0.039
At1g16390.1 68414.m01960 organic cation transporter-related low ... 35 0.039
At4g08878.1 68417.m01463 inorganic phosphate transporter, putati... 34 0.091
At5g43340.1 68418.m05298 inorganic phosphate transporter identic... 33 0.12
At3g20660.1 68416.m02615 organic cation transporter family prote... 33 0.21
At3g03090.1 68416.m00305 sugar transporter family protein simila... 33 0.21
At1g20840.1 68414.m02611 transporter-related low similarity to D... 32 0.37
At5g43360.1 68418.m05300 inorganic phosphate transporter (PHT3) ... 31 0.48
At5g16150.3 68418.m01888 hexose transporter, putative strong sim... 31 0.64
At5g16150.2 68418.m01887 hexose transporter, putative strong sim... 31 0.64
At5g16150.1 68418.m01886 hexose transporter, putative strong sim... 31 0.64
At3g45060.1 68416.m04857 high-affinity nitrate transporter, puta... 31 0.85
At5g59250.1 68418.m07425 sugar transporter family protein simila... 30 1.1
At5g13750.1 68418.m01600 transporter-related 30 1.5
At3g51490.1 68416.m05639 sugar transporter family protein simila... 30 1.5
At5g17010.3 68418.m01994 sugar transporter family protein simila... 29 2.0
At5g17010.2 68418.m01993 sugar transporter family protein simila... 29 2.0
At4g35300.2 68417.m05018 transporter-related low similarity to h... 29 2.0
At4g35300.1 68417.m05017 transporter-related low similarity to h... 29 2.0
At1g08100.1 68414.m00886 high-affinity nitrate transporter (ACH2... 29 2.0
At1g08090.1 68414.m00885 high-affinity nitrate transporter (ACH1... 29 2.0
At5g43370.1 68418.m05301 inorganic phosphate transporter (PHT2) ... 29 2.6
At3g50060.1 68416.m05473 myb family transcription factor contain... 29 2.6
At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1) ... 29 3.4
At5g13750.2 68418.m01601 transporter-related 29 3.4
At5g64540.1 68418.m08111 hypothetical protein 28 4.5
At5g19480.1 68418.m02321 expressed protein 28 6.0
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 28 6.0
At4g30200.3 68417.m04295 expressed protein contains weak similar... 28 6.0
At4g30200.2 68417.m04294 expressed protein contains weak similar... 28 6.0
At4g30200.1 68417.m04293 expressed protein contains weak similar... 28 6.0
At4g11960.1 68417.m01904 expressed protein hypothetical protein ... 28 6.0
At1g79820.2 68414.m09323 hexose transporter, putative similar to... 28 6.0
At1g79820.1 68414.m09322 hexose transporter, putative similar to... 28 6.0
At4g22890.3 68417.m03307 expressed protein 27 7.9
At4g22890.2 68417.m03306 expressed protein 27 7.9
At4g22890.1 68417.m03305 expressed protein 27 7.9
At2g44840.1 68415.m05583 ethylene-responsive element-binding pro... 27 7.9
At1g78980.1 68414.m09209 leucine-rich repeat transmembrane prote... 27 7.9
At1g25570.1 68414.m03174 leucine-rich repeat protein-related co... 27 7.9
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/128 (27%), Positives = 67/128 (52%)
Frame = +1
Query: 250 EAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPM 429
+ A+ A GFG+F +LA G+ + A+ + ++SFV P+ + +++ + +T+
Sbjct: 11 DEALVAMGFGKFQIYVLAYAGMGWVAEAMEMMLLSFVGPAVQSLWNLSARQESLITSVVF 70
Query: 430 LGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGA 609
GM+IG+Y WG ++D GR+ + T ++ V G +S+F + R + G + G
Sbjct: 71 AGMLIGAYSWGIVSDKHGRRKGFIITAVVTFVAGFLSAFSPNYMWLIILRCLVGLGLGGG 130
Query: 610 MGICFPYL 633
+ YL
Sbjct: 131 PVLASWYL 138
>At5g17010.1 68418.m01992 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 503
Score = 37.9 bits (84), Expect = 0.006
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +1
Query: 289 FCLLAVTGLIYANT--AIGITIVSFVLPSAT--CDFRMTSADKGWLTAAPMLGMVIGSYF 456
F A+ GL+Y A +S PS + + ++S D G +T+ + G + GS
Sbjct: 51 FLFPALGGLLYGYEIGATSCATISLQSPSLSGISWYNLSSVDVGLVTSGSLYGALFGSIV 110
Query: 457 WGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAM 612
+AD GR+ L+ LL V ++++ + + R + G +V AM
Sbjct: 111 AFTIADVIGRRKELILAALLYLVGALVTALAPTYSVLIIGRVIYGVSVGLAM 162
>At5g13740.1 68418.m01599 sugar transporter family protein contains
Pfam profile PF00083: major facilitator superfamily
protein
Length = 486
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = +1
Query: 406 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVSTL---LLDGVVGIISSF 546
G++ + MLG + S FWG +AD GRK ++L+ T+ + + + G+ S+F
Sbjct: 81 GFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNF 131
>At3g43790.3 68416.m04680 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 484
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +1
Query: 406 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVST---LLLDGVVGIISSF 546
G++ ++ M+G + S FWG LAD GRK ++L+ T ++ + + G+ +SF
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIILIGTFSVIIFNTLFGLSTSF 129
>At3g43790.2 68416.m04679 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 484
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +1
Query: 406 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVST---LLLDGVVGIISSF 546
G++ ++ M+G + S FWG LAD GRK ++L+ T ++ + + G+ +SF
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIILIGTFSVIIFNTLFGLSTSF 129
>At3g43790.1 68416.m04678 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 478
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +1
Query: 406 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVST---LLLDGVVGIISSF 546
G++ ++ M+G + S FWG LAD GRK ++L+ T ++ + + G+ +SF
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIILIGTFSVIIFNTLFGLSTSF 129
>At1g73220.1 68414.m08474 sugar transporter family protein contains
Pfam profile: PF00083 sugar (and other) transporter
Length = 539
Score = 35.5 bits (78), Expect = 0.030
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 430 LGMVIGSYFWGCLADTK-GRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 606
+G + GS +G LAD+ GRK L+ + +L V SF + ++ RF NGF +G
Sbjct: 145 IGSLFGSGVYGYLADSWFGRKKTLLLSCVLTFVTAFAISFSPNVWVYAFLRFANGFFRSG 204
Query: 607 AMGIC 621
C
Sbjct: 205 IGSCC 209
>At1g79360.1 68414.m09248 transporter-related low similarity to
SP|O76082 Organic cation/carnitine transporter 2 (Solute
carrier family 22, member 5) (High-affinity
sodium-dependent carnitine cotransporter) {Homo
sapiens}; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 527
Score = 35.1 bits (77), Expect = 0.039
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 403 KGWLTAAPMLGMVIGSYFWGCLADTK-GRKVVLVSTLLLDGVVGIISSFVQILPIFMACR 579
KG ++ +G +IG LAD+ GRK +L + L+ + +++ F + ++ R
Sbjct: 113 KGLPESSFFVGCLIGGLVLSTLADSSLGRKNMLFLSCLVMAISTMLTVFSPNIWVYAVLR 172
Query: 580 FVNGFAVAGAMGIC 621
FVNGF A +G C
Sbjct: 173 FVNGFGRA-TIGTC 185
>At1g16390.1 68414.m01960 organic cation transporter-related low
similarity to Organic cation/carnitine transporter 2
(Solute carrier family 22, member 5) (High-affinity
sodium-dependent carnitine cotransporter) from {Homo
sapiens} SP|O76082, {Rattus norvegicus} SP|O70594;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 518
Score = 35.1 bits (77), Expect = 0.039
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 403 KGWLTAAPMLGMVIGSYFWGCLADTK-GRKVVLVSTLLLDGVVGIISSFVQILPIFMACR 579
KG+ ++ LG +IG LAD+ GRK +L+ + L+ + ++++F + ++ R
Sbjct: 121 KGFPASSFFLGCLIGGLALSTLADSSLGRKNMLLLSCLIMSLSSMLTAFSTSIWVYAFLR 180
Query: 580 FVNGFAVAGAMGIC 621
F+NG A +G C
Sbjct: 181 FLNGCGRA-TIGTC 193
>At4g08878.1 68417.m01463 inorganic phosphate transporter, putative
similar to inorganic phosphate transporter (GI:3869190)
[Arabidopsis thaliana]
Length = 280
Score = 33.9 bits (74), Expect = 0.091
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 433 GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISS 543
G +G F+GCL D GRK V TLL+ + I SS
Sbjct: 62 GTFLGQIFFGCLGDKLGRKRVYGLTLLIMTICSIASS 98
>At5g43340.1 68418.m05298 inorganic phosphate transporter identical
to inorganic phosphate transporter [Arabidopsis
thaliana] GI:3869190
Length = 516
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 349 VSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVV 528
+ + +P ++ + ++ G IG F+GCL D GRK V TLL+ +
Sbjct: 53 IYYQVPGSSSPGSLPDGISAAVSGVAFAGTFIGQIFFGCLGDKLGRKRVYGLTLLIMTIC 112
Query: 529 GIIS 540
I S
Sbjct: 113 SICS 116
>At3g20660.1 68416.m02615 organic cation transporter family protein
similar to organic cation transporter OCT3 [Rattus
norvegicus] GI:3273722, organic cation transporter 3
[Mus musculus] GI:4454795; contains Pfam profile
PF00083: major facilitator superfamily protein
Length = 534
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 451 YFWGCLADTK-GRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 606
+ +G L+D+K GRK L +++ + GI ++F ++ RF+ GF+ G
Sbjct: 148 FLFGHLSDSKLGRKGSLTVVCIINAIFGIATAFSPNYWTYVVLRFLTGFSTGG 200
>At3g03090.1 68416.m00305 sugar transporter family protein similar
to xylose permease [Bacillus megaterium] GI:1924928;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 503
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +1
Query: 382 FRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILP 561
+ ++S D G +T+ + G +IGS +AD GR+ L+ L V I++ +
Sbjct: 86 YDLSSVDVGIITSGSLYGALIGSIVAFSVADIIGRRKELILAAFLYLVGAIVTVVAPVFS 145
Query: 562 IFMACRFVNGFAVAGAM 612
I + R G + M
Sbjct: 146 ILIIGRVTYGMGIGLTM 162
>At1g20840.1 68414.m02611 transporter-related low similarity to
D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 734
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/85 (21%), Positives = 43/85 (50%)
Frame = +1
Query: 379 DFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQIL 558
D + ++ +G + A ++G + + G ++D GR+ +L+ + ++ V G+I + +
Sbjct: 35 DLNLPTSVQGLVVAMSLIGATVITTCSGPISDWLGRRPMLILSSVMYFVCGLIMLWSPNV 94
Query: 559 PIFMACRFVNGFAVAGAMGICFPYL 633
+ R +NGF A+ + Y+
Sbjct: 95 YVLCFARLLNGFGAGLAVTLVPVYI 119
>At5g43360.1 68418.m05300 inorganic phosphate transporter (PHT3)
identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2780347
Length = 521
Score = 31.5 bits (68), Expect = 0.48
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +1
Query: 283 FHFCLLAVTGLIYANTAIGITIVSFV--LPSATCDFRMTSADKGWL--------TAAPML 432
+HF + + G+ + A + VS V L F TSA G L +
Sbjct: 20 YHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRLYYFNPTSAKPGSLPPHVAAAVNGVALC 79
Query: 433 GMVIGSYFWGCLADTKGRKVVLVSTLLL 516
G + G F+G L D GRK V TL++
Sbjct: 80 GTLAGQLFFGWLGDKLGRKKVYGITLIM 107
>At5g16150.3 68418.m01888 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 403 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFV 549
+GW+ ++ + G +GS+ G LAD GR T LD + I +F+
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGR----TRTFQLDAIPLAIGAFL 190
>At5g16150.2 68418.m01887 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 403 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFV 549
+GW+ ++ + G +GS+ G LAD GR T LD + I +F+
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGR----TRTFQLDAIPLAIGAFL 190
>At5g16150.1 68418.m01886 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 403 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFV 549
+GW+ ++ + G +GS+ G LAD GR T LD + I +F+
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGR----TRTFQLDAIPLAIGAFL 190
>At3g45060.1 68416.m04857 high-affinity nitrate transporter,
putative similar to trans-membrane nitrate transporter
protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058,
high-affinity nitrate transporter ACH1 [Arabidopsis
thaliana] GI:3608362
Length = 542
Score = 30.7 bits (66), Expect = 0.85
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +1
Query: 358 VLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGII 537
++P + +T D G A + G + G + D G + +L+L
Sbjct: 95 LVPVIRDNLDLTKTDIGNAGVASVSGAIFSRLAMGAVCDLLGARYGTAFSLMLTAPAVFS 154
Query: 538 SSFVQILPIFMACRFVNGFAVA 603
SFV ++A RF+ GF +A
Sbjct: 155 MSFVADAGSYLAVRFMIGFCLA 176
>At5g59250.1 68418.m07425 sugar transporter family protein similar
to D-xylose-H+ symporter from Lactobacillus brevis
GI:2895856, sugar-porter family protein 2 [Arabidopsis
thaliana] GI:14585701; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 558
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +1
Query: 367 SATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSF 546
S T F + G + + + G ++GS +AD GR+ L+ +L + +I+
Sbjct: 132 SGTTWFNFSPVQLGLVVSGSLYGALLGSISVYGVADFLGRRRELIIAAVLYLLGSLITGC 191
Query: 547 VQILPIFMACRFVNGFAVAGAM 612
L I + R + GF + AM
Sbjct: 192 APDLNILLVGRLLYGFGIGLAM 213
>At5g13750.1 68418.m01600 transporter-related
Length = 478
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 406 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVST 507
G++ + MLG S WG +AD GRK V+L+ T
Sbjct: 80 GFVGCSFMLGRAFTSVAWGLVADRYGRKPVILIGT 114
>At3g51490.1 68416.m05639 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 729
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/77 (20%), Positives = 41/77 (53%)
Frame = +1
Query: 403 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRF 582
+G + A ++G + + F G ++D GR+ +L+ + +L + I+ + + + + R
Sbjct: 45 EGLIVAMSLIGATLITTFSGPVSDKVGRRSMLILSSVLYFLSSIVMFWSPNVYVLLFARL 104
Query: 583 VNGFAVAGAMGICFPYL 633
++GF + A+ + Y+
Sbjct: 105 LDGFGIGLAVTLVPIYI 121
>At5g17010.3 68418.m01994 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 440
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 409 WLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVN 588
++T+ + G + GS +AD GR+ L+ LL V ++++ + + R +
Sbjct: 96 FMTSGSLYGALFGSIVAFTIADVIGRRKELILAALLYLVGALVTALAPTYSVLIIGRVIY 155
Query: 589 GFAVAGAM 612
G +V AM
Sbjct: 156 GVSVGLAM 163
>At5g17010.2 68418.m01993 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 440
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 409 WLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVN 588
++T+ + G + GS +AD GR+ L+ LL V ++++ + + R +
Sbjct: 96 FMTSGSLYGALFGSIVAFTIADVIGRRKELILAALLYLVGALVTALAPTYSVLIIGRVIY 155
Query: 589 GFAVAGAM 612
G +V AM
Sbjct: 156 GVSVGLAM 163
>At4g35300.2 68417.m05018 transporter-related low similarity to
hexose transporter [Solanum tuberosum] GI:8347246;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 729
Score = 29.5 bits (63), Expect = 2.0
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 301 AVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTK 480
+V GLI A + IG T+++ TC + AD WL PML + YF G L
Sbjct: 43 SVEGLIVAMSLIGATLIT------TCSGGV--AD--WLGRRPMLILSSILYFVGSLVMLW 92
Query: 481 GRKV-VLVSTLLLDGV-VGIISSFVQILPIFMA 573
V VL+ LLDG VG++ V ++PI+++
Sbjct: 93 SPNVYVLLLGRLLDGFGVGLV---VTLVPIYIS 122
>At4g35300.1 68417.m05017 transporter-related low similarity to
hexose transporter [Solanum tuberosum] GI:8347246;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 739
Score = 29.5 bits (63), Expect = 2.0
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 301 AVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTK 480
+V GLI A + IG T+++ TC + AD WL PML + YF G L
Sbjct: 43 SVEGLIVAMSLIGATLIT------TCSGGV--AD--WLGRRPMLILSSILYFVGSLVMLW 92
Query: 481 GRKV-VLVSTLLLDGV-VGIISSFVQILPIFMA 573
V VL+ LLDG VG++ V ++PI+++
Sbjct: 93 SPNVYVLLLGRLLDGFGVGLV---VTLVPIYIS 122
>At1g08100.1 68414.m00886 high-affinity nitrate transporter (ACH2)
identical to high-affinity nitrate transporter ACH2
[Arabidopsis thaliana] GI:3608364
Length = 522
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/110 (19%), Positives = 42/110 (38%)
Frame = +1
Query: 274 FGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSY 453
F + H ++ + ++ + + ++P + +T D G A + G +
Sbjct: 55 FAKPHMRTFHLSWISFSTCFVSTFAAAPLIPIIRENLNLTKHDIGNAGVASVSGSIFSRL 114
Query: 454 FWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVA 603
G + D G + ++L SFV F+ RF+ GF +A
Sbjct: 115 VMGAVCDLLGPRYGCAFLVMLSAPTVFSMSFVSDAAGFITVRFMIGFCLA 164
>At1g08090.1 68414.m00885 high-affinity nitrate transporter (ACH1)
identical to trans-membrane nitrate transporter protein
AtNRT2:1 [Arabidopsis thaliana] GI:3747058,
high-affinity nitrate transporter ACH1 [Arabidopsis
thaliana] GI:3608362
Length = 530
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/110 (19%), Positives = 42/110 (38%)
Frame = +1
Query: 274 FGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSY 453
F + H ++ + ++ + + ++P + +T D G A + G +
Sbjct: 57 FAKPHMRTFHLSWISFSTCFVSTFAAAPLVPIIRENLNLTKQDIGNAGVASVSGSIFSRL 116
Query: 454 FWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVA 603
G + D G + ++L SFV F+ RF+ GF +A
Sbjct: 117 VMGAVCDLLGPRYGCAFLVMLSAPTVFSMSFVSDAAGFITVRFMIGFCLA 166
>At5g43370.1 68418.m05301 inorganic phosphate transporter (PHT2)
identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2780348
Length = 524
Score = 29.1 bits (62), Expect = 2.6
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Frame = +1
Query: 283 FHFCLLAVTGLIYANTAIGITIVSFV--LPSATCDFRMTSADKGWL---TAAPMLGMVI- 444
+HF + + G+ + A + VS V L F SA G L AA + G+ +
Sbjct: 20 YHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYFNPESAKPGSLPPHVAAAVNGVALC 79
Query: 445 ----GSYFWGCLADTKGRKVVLVSTLLL 516
G F+G L D GRK V TL++
Sbjct: 80 GTLSGQLFFGWLGDKLGRKKVYGLTLIM 107
>At3g50060.1 68416.m05473 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA MYB-related protein (1107 bp)
GI:1263096
Length = 301
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 536 MIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVADGST 357
M P +P+ V ++T+ P S+ Q ++PM I V QPL E+ S D T
Sbjct: 147 MSPESPNGIDVSDSSTI-PSPSSPVAQLFKPMPISGGFTVVPQPLPVEMSSSSE--DPPT 203
Query: 356 NDTIVIPMA 330
+ ++ +P A
Sbjct: 204 SLSLSLPGA 212
>At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1)
(PT1) identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2258116
Length = 524
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Frame = +1
Query: 283 FHFCLLAVTGLIYANTAIGITIVSFV--LPSATCDFRMTSADKGWL---TAAPMLGMVI- 444
+HF + + G+ + A + VS V L F SA G L AA + G+ +
Sbjct: 20 YHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYFNPESAKPGSLPPHVAAAVNGVALC 79
Query: 445 ----GSYFWGCLADTKGRKVVLVSTLLL 516
G F+G L D GRK V TL++
Sbjct: 80 GTLSGQLFFGWLGDKLGRKKVYGLTLVM 107
>At5g13750.2 68418.m01601 transporter-related
Length = 392
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 427 MLGMVIGSYFWGCLADTKGRK-VVLVST 507
MLG S WG +AD GRK V+L+ T
Sbjct: 1 MLGRAFTSVAWGLVADRYGRKPVILIGT 28
>At5g64540.1 68418.m08111 hypothetical protein
Length = 440
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 548 TNDEMIPTTPSSSRVDTNTTLRP 480
T+ +PTTPSSS+++T T+ P
Sbjct: 280 TSSHSVPTTPSSSQLNTTTSDSP 302
>At5g19480.1 68418.m02321 expressed protein
Length = 207
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 542 DEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYE 447
D++IP SSR DTN ++PFV + + +E
Sbjct: 66 DQLIPNASLSSR-DTNARIQPFVLDELKEAFE 96
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 523 VVGIISSFVQILPIFMACRFVNGFAVAGAMGICFPY 630
VVG ++SF L + A F GF A G+ F +
Sbjct: 255 VVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGF 290
>At4g30200.3 68417.m04295 expressed protein contains weak
similarities to Pfam profiles: PF00041 Fibronectin type
III domain, PF00628 PHD-finger; supporting cDNA
gi|11177136|dbj|AB050977.1|
Length = 702
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 545 NDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVAD 366
ND ++P PSS D N+ +AK+ ++ I I V Q + + + V D
Sbjct: 485 NDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIVQIEKDVEQIVLLDDEEQEAVLD 544
Query: 365 GSTNDTIVI 339
+ ++T V+
Sbjct: 545 KTESETPVV 553
>At4g30200.2 68417.m04294 expressed protein contains weak
similarities to Pfam profiles: PF00041 Fibronectin type
III domain, PF00628 PHD-finger; supporting cDNA
gi|11177136|dbj|AB050977.1|
Length = 714
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 545 NDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVAD 366
ND ++P PSS D N+ +AK+ ++ I I V Q + + + V D
Sbjct: 497 NDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIVQIEKDVEQIVLLDDEEQEAVLD 556
Query: 365 GSTNDTIVI 339
+ ++T V+
Sbjct: 557 KTESETPVV 565
>At4g30200.1 68417.m04293 expressed protein contains weak
similarities to Pfam profiles: PF00041 Fibronectin type
III domain, PF00628 PHD-finger; supporting cDNA
gi|11177136|dbj|AB050977.1|
Length = 685
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 545 NDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVAD 366
ND ++P PSS D N+ +AK+ ++ I I V Q + + + V D
Sbjct: 468 NDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIVQIEKDVEQIVLLDDEEQEAVLD 527
Query: 365 GSTNDTIVI 339
+ ++T V+
Sbjct: 528 KTESETPVV 536
>At4g11960.1 68417.m01904 expressed protein hypothetical protein
F7H19.70 - Arabidopsis thaliana, PID:e1310057
Length = 313
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 217 PFSIIFTWSFTFKIIVRYEITLTRYMAKSLV 125
PFS IFTW IV ++LT+ + K +
Sbjct: 225 PFSFIFTWFAAVPAIVYLALSLTKLILKDFL 255
>At1g79820.2 68414.m09323 hexose transporter, putative similar to
hexose transporter GI:8347246 from (Solanum tuberosum);
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 495
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 286 HFCLLAVTGLIYANTAIGITIVSFVLPSATCD--FRMTSADKGWLTAAPMLGMVIGSYFW 459
H + ++T L++ + +V+ L S + D F + +G + + + G IGS F
Sbjct: 57 HVLVASLTSLLFG---YHLGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFS 113
Query: 460 GCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAV 600
G +AD GR+ + L V +S+ + L + RF+ G +
Sbjct: 114 GLVADGVGRRRAFQLSALPMIVGASVSASTESLMGMLLGRFLVGIGM 160
>At1g79820.1 68414.m09322 hexose transporter, putative similar to
hexose transporter GI:8347246 from (Solanum tuberosum);
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 495
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 286 HFCLLAVTGLIYANTAIGITIVSFVLPSATCD--FRMTSADKGWLTAAPMLGMVIGSYFW 459
H + ++T L++ + +V+ L S + D F + +G + + + G IGS F
Sbjct: 57 HVLVASLTSLLFG---YHLGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFS 113
Query: 460 GCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAV 600
G +AD GR+ + L V +S+ + L + RF+ G +
Sbjct: 114 GLVADGVGRRRAFQLSALPMIVGASVSASTESLMGMLLGRFLVGIGM 160
>At4g22890.3 68417.m03307 expressed protein
Length = 324
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 217 PFSIIFTWSFTFKIIVRYEITLTRYMAKSLV 125
P+S IFTW +IV +++T+ + K +
Sbjct: 236 PYSFIFTWFAAVPVIVYLALSITKLIIKDFL 266
>At4g22890.2 68417.m03306 expressed protein
Length = 324
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 217 PFSIIFTWSFTFKIIVRYEITLTRYMAKSLV 125
P+S IFTW +IV +++T+ + K +
Sbjct: 236 PYSFIFTWFAAVPVIVYLALSITKLIIKDFL 266
>At4g22890.1 68417.m03305 expressed protein
Length = 324
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 217 PFSIIFTWSFTFKIIVRYEITLTRYMAKSLV 125
P+S IFTW +IV +++T+ + K +
Sbjct: 236 PYSFIFTWFAAVPVIVYLALSITKLIIKDFL 266
>At2g44840.1 68415.m05583 ethylene-responsive element-binding
protein, putative
Length = 226
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = -1
Query: 455 KYEPMTI-PNIGA---AVSQPLSAEVMRKSHVADGSTNDTIVIP 336
KYEP+ I P + +VS L++E R+SHV DG + ++V+P
Sbjct: 156 KYEPVRIRPRRRSPEPSVSDQLTSEQKRESHVDDGES--SLVVP 197
>At1g78980.1 68414.m09209 leucine-rich repeat transmembrane protein
kinase, putative similar to leucine-rich repeat
transmembrane protein kinase 2 GI:3360291 from [Zea
mays]
Length = 693
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -1
Query: 605 PATAKPLTNLQAMNMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMT 438
P + + NLQ++N+G+ N E+ S+++T +S K PQ + +T
Sbjct: 131 PYSLSQMKNLQSINLGQNKLNGELPDMFQKLSKLETLDFSLNKLSGKLPQSFANLT 186
>At1g25570.1 68414.m03174 leucine-rich repeat protein-related
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to light
repressible receptor protein kinase [Arabidopsis
thaliana] gi|1321686|emb|CAA66376
Length = 628
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -1
Query: 566 NMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVS 411
N G+ W +DE + S S + +TL Q Y PM + VS
Sbjct: 217 NFGRSWQSDEDFRSEDSRSVARSLSTLEKIKGVDQAPNYFPMKLYQTAVTVS 268
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,971,006
Number of Sequences: 28952
Number of extensions: 323314
Number of successful extensions: 938
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -