Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a07r
         (782 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2864|AAF57573.1|  866|Drosophila melanogaster CG10051-P...    30   4.1  
AY094849-1|AAM11202.1|  783|Drosophila melanogaster RE09708p pro...    29   5.4  

>AE013599-2864|AAF57573.1|  866|Drosophila melanogaster CG10051-PA
           protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 222 SMRLIKLYLNFLTNCYNLCF*CSNRLKMLRNHGLI-QNNFTRLCKSMVTLDST 377
           ++R+I      LT+     F  +    ML +HG I Q+ +++ CK++V LDST
Sbjct: 185 TLRVISRSERTLTHPVVFLFNGAEEACMLGSHGFITQHKWSKNCKALVNLDST 237


>AY094849-1|AAM11202.1|  783|Drosophila melanogaster RE09708p
           protein.
          Length = 783

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 222 SMRLIKLYLNFLTNCYNLCF*CSNRLKMLRNHGLI-QNNFTRLCKSMVTLDST 377
           ++R+I      LT+     F  +    ML +HG I Q+ +++ CK++V LDST
Sbjct: 102 TLRVISRSERRLTHPVVFLFNGAEEACMLGSHGFITQHKWSKNCKALVNLDST 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,321,055
Number of Sequences: 53049
Number of extensions: 411190
Number of successful extensions: 599
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)