Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a07f
         (609 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC046107-1|AAH46107.1|  595|Homo sapiens ESF1 protein protein.         31   3.2  
BC039706-1|AAH39706.2|  294|Homo sapiens ESF1 protein protein.         31   3.2  
BC030513-1|AAH30513.1|  595|Homo sapiens ESF1 protein protein.         31   3.2  
BC020952-1|AAH20952.1|  552|Homo sapiens Unknown (protein for IM...    31   3.2  
AL161659-1|CAC07199.1|  851|Homo sapiens chromosome 20 open read...    31   3.2  
AK022369-1|BAB14023.1|  589|Homo sapiens protein ( Homo sapiens ...    30   7.3  
AB065558-1|BAC05796.1|  312|Homo sapiens seven transmembrane hel...    29   9.7  

>BC046107-1|AAH46107.1|  595|Homo sapiens ESF1 protein protein.
          Length = 595

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +3

Query: 264 VKLSMKTKPYEYKTAINQKQXXXXXXXXXXXXKCKLSLKTPTSPSKNAK---MEEDKQNQ 434
           V+   +TK   +K + N+               CK  + +  SP K++K    +  K+ +
Sbjct: 111 VEKKKETKKANHKGSENKTDLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKK 170

Query: 435 VILQNNVEGNDEVQVDTIEADKSDMTSSRR 524
            I+Q+  + + E +  T+++  S++  S R
Sbjct: 171 NIVQHTTDSSLEEKQRTLDSGTSEIVKSPR 200


>BC039706-1|AAH39706.2|  294|Homo sapiens ESF1 protein protein.
          Length = 294

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +3

Query: 264 VKLSMKTKPYEYKTAINQKQXXXXXXXXXXXXKCKLSLKTPTSPSKNAK---MEEDKQNQ 434
           V+   +TK   +K + N+               CK  + +  SP K++K    +  K+ +
Sbjct: 111 VEKKKETKKANHKGSENKTDLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKK 170

Query: 435 VILQNNVEGNDEVQVDTIEADKSDMTSSRR 524
            I+Q+  + + E +  T+++  S++  S R
Sbjct: 171 NIVQHTTDSSLEEKQRTLDSGTSEIVKSPR 200


>BC030513-1|AAH30513.1|  595|Homo sapiens ESF1 protein protein.
          Length = 595

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +3

Query: 264 VKLSMKTKPYEYKTAINQKQXXXXXXXXXXXXKCKLSLKTPTSPSKNAK---MEEDKQNQ 434
           V+   +TK   +K + N+               CK  + +  SP K++K    +  K+ +
Sbjct: 111 VEKKKETKKANHKGSENKTDLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKK 170

Query: 435 VILQNNVEGNDEVQVDTIEADKSDMTSSRR 524
            I+Q+  + + E +  T+++  S++  S R
Sbjct: 171 NIVQHTTDSSLEEKQRTLDSGTSEIVKSPR 200


>BC020952-1|AAH20952.1|  552|Homo sapiens Unknown (protein for
           IMAGE:3850711) protein.
          Length = 552

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +3

Query: 264 VKLSMKTKPYEYKTAINQKQXXXXXXXXXXXXKCKLSLKTPTSPSKNAK---MEEDKQNQ 434
           V+   +TK   +K + N+               CK  + +  SP K++K    +  K+ +
Sbjct: 20  VEKKKETKKANHKGSENKTDLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKK 79

Query: 435 VILQNNVEGNDEVQVDTIEADKSDMTSSRR 524
            I+Q+  + + E +  T+++  S++  S R
Sbjct: 80  NIVQHTTDSSLEEKQRTLDSGTSEIVKSPR 109


>AL161659-1|CAC07199.1|  851|Homo sapiens chromosome 20 open reading
           frame 6 protein.
          Length = 851

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +3

Query: 264 VKLSMKTKPYEYKTAINQKQXXXXXXXXXXXXKCKLSLKTPTSPSKNAK---MEEDKQNQ 434
           V+   +TK   +K + N+               CK  + +  SP K++K    +  K+ +
Sbjct: 111 VEKKKETKKANHKGSENKTDLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKK 170

Query: 435 VILQNNVEGNDEVQVDTIEADKSDMTSSRR 524
            I+Q+  + + E +  T+++  S++  S R
Sbjct: 171 NIVQHTTDSSLEEKQRTLDSGTSEIVKSPR 200


>AK022369-1|BAB14023.1|  589|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12307 fis, clone MAMMA1001908. ).
          Length = 589

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +3

Query: 264 VKLSMKTKPYEYKTAINQKQXXXXXXXXXXXXKCKLSLKTPTSPSKNAK---MEEDKQNQ 434
           V+   +TK   +K + N+               CK  + +  SP K++K    +  K+ +
Sbjct: 111 VEKKKETKKANHKGSENKTDLDNSIGIKKMKTSCKFKIDSNISPKKDSKEFTQKNKKEKK 170

Query: 435 VILQNNVEGNDEVQVDTIEADKSDMTSSRR 524
            I+Q+  + + E +  T+++  S++  + R
Sbjct: 171 NIVQHTTDSSLEEKQRTLDSGTSEIVKTPR 200


>AB065558-1|BAC05796.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -2

Query: 317 LINGCLI--FIWLGFH**FNSFYIRIFYVLVFTLIGSFARFNSFQVIFTKTCK 165
           L NG L+  FI LGF   F  + ++IF+ + F+LI       +  ++ T TC+
Sbjct: 3   LKNGSLVTEFILLGF---FGRWELQIFFFVTFSLIYGATVMGNILIMVTVTCR 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,275,114
Number of Sequences: 237096
Number of extensions: 1569443
Number of successful extensions: 2692
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2692
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)