Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a06r
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.        136   6e-34
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   1.2  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    25   2.2  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    25   2.9  
Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    23   6.6  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   8.8  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score =  136 bits (329), Expect = 6e-34
 Identities = 61/120 (50%), Positives = 78/120 (65%)
 Frame = -2

Query: 659 GTDADGDEIYAGRAHHEGDIVPAKVIPTKNACYISFGGEEVLKDQFEVLVPSMFAWQFST 480
           G D+DG +I+ GRAHH GD++PAKVIP K A Y+++GG+E L +  EVLV     W  ++
Sbjct: 22  GVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQETLVEHVEVLVHKQLIWDTAS 81

Query: 479 NGEVPPGAVEAGSTADGEKLYFGRVNHDGCTTPGKIHPSHACCYYPFDGEERSSAEYECL 300
            G+VP GAV  G T+DGE LY GR  H+G  T GK+  SH C Y P+ G E S   YE L
Sbjct: 82  AGQVPLGAVVGGHTSDGEILYVGRAYHEGSQTIGKVQCSHNCIYIPYGGAEVSVPTYEVL 141



 Score = 46.4 bits (105), Expect = 8e-07
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = -2

Query: 485 STNGEVPPGAVEAGSTADGEKLYFGRVNHDGCTTPGKIHPSHACCYYPFDGEERSSAEYE 306
           S +G  PP  V  G  +DG +++ GR +H G   P K+ P     Y  + G+E      E
Sbjct: 9   SVHGPYPPHMVPGGVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQETLVEHVE 68

Query: 305 CLV 297
            LV
Sbjct: 69  VLV 71


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 430 PSAVEPASTAPGGTSPFV 483
           P    PA  APGG  PFV
Sbjct: 67  PGRSHPAEPAPGGNGPFV 84


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 516 TSTIHVRLAVLDKWRSPARRCRGWLHS*RGEAL 418
           T+T   R A   KW+   +R  GW  S + EA+
Sbjct: 493 TTTEEERNARYTKWKMAVQRSLGWAVSKKSEAM 525


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = -1

Query: 426 EALLRQGQS*RMHY-----AWQDPPVTRMLLLPV*WRRKELRRI 310
           + L R+ QS  M Y     AWQ   +TR    P  WR   LRR+
Sbjct: 8   QELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRL 51


>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -2

Query: 635 IYAGRAHHEGDIVPAKVIPTKNACYISFGGEEVLKDQFEV 516
           +Y G  +  G ++  + I T   C +SF  +++L   ++V
Sbjct: 19  LYRGAFYCGGSLINDRYIVTAAHCVLSFTPQQLLAKLYDV 58


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -2

Query: 413 GRVNHDGCTTPGKIHPSHACCYYPFDGEERSSAEYECLVLM*KMLSKN 270
           G+  H+GC++  ++HP  A       G     +E        + LSKN
Sbjct: 387 GQWKHEGCSSHERLHPFMASQAASGTGTLTQFSELRVKAWRREFLSKN 434


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,194
Number of Sequences: 2352
Number of extensions: 13962
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)