Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a06f
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.        141   1e-35
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   1.1  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    25   1.9  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    25   2.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   3.3  
Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    23   5.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.7  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score =  141 bits (342), Expect = 1e-35
 Identities = 65/138 (47%), Positives = 85/138 (61%)
 Frame = +3

Query: 63  WVPACLSQRSIPPGALRVGTDADGDEIYAGRAHHEGDIVPAKVIPTKNACYISFGGEEVL 242
           W+P  +     PP  +  G D+DG +I+ GRAHH GD++PAKVIP K A Y+++GG+E L
Sbjct: 5   WIPTSV-HGPYPPHMVPGGVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQETL 63

Query: 243 KDQFEVLVPSMFAWQFSTNGEVPPGAVEAGSTADGEKLYFGRVNHDGCTTPGKIHPSHAC 422
            +  EVLV     W  ++ G+VP GAV  G T+DGE LY GR  H+G  T GK+  SH C
Sbjct: 64  VEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSDGEILYVGRAYHEGSQTIGKVQCSHNC 123

Query: 423 CYYPFDGEERSSAEYECL 476
            Y P+ G E S   YE L
Sbjct: 124 IYIPYGGAEVSVPTYEVL 141



 Score = 46.4 bits (105), Expect = 7e-07
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +3

Query: 291 STNGEVPPGAVEAGSTADGEKLYFGRVNHDGCTTPGKIHPSHACCYYPFDGEERSSAEYE 470
           S +G  PP  V  G  +DG +++ GR +H G   P K+ P     Y  + G+E      E
Sbjct: 9   SVHGPYPPHMVPGGVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQETLVEHVE 68

Query: 471 CLV 479
            LV
Sbjct: 69  VLV 71


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 346 PSAVEPASTAPGGTSPFV 293
           P    PA  APGG  PFV
Sbjct: 67  PGRSHPAEPAPGGNGPFV 84


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 260 TSTIHVRLAVLDKWRSPARRCRGWLHS*RGEAL 358
           T+T   R A   KW+   +R  GW  S + EA+
Sbjct: 493 TTTEEERNARYTKWKMAVQRSLGWAVSKKSEAM 525


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +2

Query: 350 EALLRQGQS*RMHY-----AWQDPPVTRMLLLPV*WRRKELRRI 466
           + L R+ QS  M Y     AWQ   +TR    P  WR   LRR+
Sbjct: 8   QELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRL 51


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 48  PGTYRWVPAC 77
           PGT RWVP C
Sbjct: 368 PGTGRWVPIC 377


>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 141 IYAGRAHHEGDIVPAKVIPTKNACYISFGGEEVLKDQFEV 260
           +Y G  +  G ++  + I T   C +SF  +++L   ++V
Sbjct: 19  LYRGAFYCGGSLINDRYIVTAAHCVLSFTPQQLLAKLYDV 58


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 363 GRVNHDGCTTPGKIHPSHACCYYPFDGEERSSAEYECLVLM*KMLSKN 506
           G+  H+GC++  ++HP  A       G     +E        + LSKN
Sbjct: 387 GQWKHEGCSSHERLHPFMASQAASGTGTLTQFSELRVKAWRREFLSKN 434


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,198
Number of Sequences: 2352
Number of extensions: 15043
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)