Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a05r
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 32 0.34
SB_25379| Best HMM Match : Keratin_B2 (HMM E-Value=2.5) 31 1.1
SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 30 1.8
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 30 1.8
SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13) 29 2.4
SB_24883| Best HMM Match : Peptidase_M13 (HMM E-Value=6.9e-20) 29 4.2
SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 28 5.6
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 28 5.6
SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08) 28 7.4
SB_13265| Best HMM Match : IncA (HMM E-Value=0.32) 28 7.4
SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9) 28 7.4
SB_37199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_725| Best HMM Match : Apolipoprotein (HMM E-Value=0.51) 28 7.4
SB_50253| Best HMM Match : HYR (HMM E-Value=2.6e-20) 27 9.8
SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_9681| Best HMM Match : IncA (HMM E-Value=0.58) 27 9.8
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 27 9.8
SB_19891| Best HMM Match : Keratin (HMM E-Value=0.96) 27 9.8
SB_15566| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_13184| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_8396| Best HMM Match : Spb1_C (HMM E-Value=0.65) 27 9.8
>SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 470 NDHGRNSRLFFNI*LFRFDAFNGGSAGSIVDVNKNVDERGKLSRNEGSDVD 622
N+ G L+ I LFR N GS DV K+ DER ++ SDVD
Sbjct: 23 NERGNQFSLYQKIDLFRLQCLNEAEEGSGKDVFKSWDERLDTTKFVESDVD 73
>SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 910
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 332 HGGHQGHVTNVHWARGHNGGV-SHDHRGYTRSLGNNYR 442
+G HQGH+ N +GH G V +++H TRS G Y+
Sbjct: 777 YGAHQGHMCNGLPEKGHYGDVGAYEHAMDTRSPGYPYK 814
>SB_25379| Best HMM Match : Keratin_B2 (HMM E-Value=2.5)
Length = 442
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = -3
Query: 640 PIVPSPVHVGPLVPGQLTPLVHILININDAASATPVESVEPEQSNVEEK 494
PI P P + + G L +++++ND +A PVE+V+ +Q++ + K
Sbjct: 350 PISPDPA-IMEEIDGLSNTLDDLILSLNDVDTAEPVENVDIDQADADCK 397
>SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Frame = +2
Query: 299 ARGHNGRVSHDHGG----HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRI 466
+R +G DHGG H G + R +GG DH G R G R GR
Sbjct: 2 SRRDHGSTRRDHGGTGRDHGGTRRDHGGTRRDHGGTGRDHGGTGRDHGGTGRDHGGTGR- 60
Query: 467 SNDHGRNSR 493
DHG R
Sbjct: 61 --DHGGTGR 67
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +2
Query: 302 RGHNGRVSHDHGGHQ---GHVTNVHWARGHN-GGVSHDHRGYTRSLGNNYRARYYDGRIS 469
R H G DHGG + G H G + GG DH G R G R GR
Sbjct: 11 RDHGG-TGRDHGGTRRDHGGTRRDHGGTGRDHGGTGRDHGGTGRDHGGTGRDHGGTGR-- 67
Query: 470 NDHGRNSR 493
DHG R
Sbjct: 68 -DHGGTGR 74
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = +2
Query: 302 RGHNGRVSHDHGG----HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRIS 469
R H G DHGG H G + R +GG DH G R G R G
Sbjct: 60 RDHGG-TGRDHGGTGRDHGGTRRDHDGTRRDHGGTRRDHGGTRRDHGGTRRDH---GGTR 115
Query: 470 NDHGRNSR 493
DHG R
Sbjct: 116 RDHGGTRR 123
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +2
Query: 305 GHNGRVSHDHGGHQ----GHVTNVHWARGHNGGVSHDHRGYTR-SLGNNYRARYYDGRIS 469
GH+ SH++ GH GH H N G SH H G++ + G+++ + S
Sbjct: 310 GHSHGHSHENHGHSHENHGHSHENHGHSHENHGHSHKHHGHSHDNHGHSHENHGHSHGHS 369
Query: 470 NDHGRNSRLF 499
++H L+
Sbjct: 370 HEHEPKQDLY 379
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 332 HGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRN 487
HG GH H N G SH++ G++ N+ + + G ++HG +
Sbjct: 309 HGHSHGHSHENHGHSHENHGHSHENHGHSHE--NHGHSHKHHGHSHDNHGHS 358
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 592 LTPLVHILININDAASATPVESVEPEQSNVEE 497
LT H+LIN+ND PV S QS V+E
Sbjct: 597 LTDTSHLLINVNDINDNPPVFSPSAYQSRVKE 628
>SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13)
Length = 492
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = +2
Query: 302 RGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHG 481
R H+ R H HGG G+ + GH GG H H G G+ + DG HG
Sbjct: 123 RSHSHR--HAHGGGPGYGGDYGGGLGHCGGPGHGH-GPGHGHGHGAGLVHGDGGPGPGHG 179
>SB_24883| Best HMM Match : Peptidase_M13 (HMM E-Value=6.9e-20)
Length = 206
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 527 AFNGGSAGSIV--DVNKNVDERGKLSRNEGSDVDWGWDD 637
A N G GS++ ++ D+ GK ++GS V+W W D
Sbjct: 89 AVNFGGIGSVIGHELTHGFDDSGKRYDSKGSQVEW-WTD 126
>SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 299 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY 439
A GH ++H H H A H G++H H T+ L ++Y
Sbjct: 214 AHGHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSH---TKGLAHSY 257
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 311 NGRVSHDHGG--HQGHVTNVHWARGHNGGVSHDHRGYTR 421
+GR++ GG H+++ RG GGVS H G+ R
Sbjct: 1059 HGRLTRGDGGGASSAHISHGRLTRGDGGGVSSAHIGHGR 1097
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 28.3 bits (60), Expect = 5.6
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +3
Query: 387 AGSATITGATLG----PSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAA 554
A SA+ TGA LG P + G+ G A T G + CS ST TG A
Sbjct: 612 AWSASTTGARLGQHQPPGQGLVGINHR--GKAWSASTTGGKA----CSAST--TG----A 659
Query: 555 SLMLIRMWTRGVSCPGTRGPTWTGDGT 635
SL I W +G+ RG W+ T
Sbjct: 660 SLFSINHWGQGLVRINHRGKAWSASTT 686
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 326 HDHGGHQGHVTNVHWA-RGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRNSR 493
H HGG + T+ H + H+ H HR + + + GR ++DH R
Sbjct: 417 HGHGGLEAIQTSKHQQDQHHHHHHHHHHRHHKHRSSSGHSTTEASGRRASDHSHEMR 473
>SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08)
Length = 303
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +3
Query: 429 ATITGLGTMMAGSAMITGETAGFSSTFDCS-GSTLSTGVALAASLMLIRMWTRG-VSCPG 602
+T+TG AG G AG F C G L A + + +W+ SC
Sbjct: 97 STVTGTTVSPAGCTQTGGAYAGIHCVFSCQPGYKLPENTANSVTCQSTGLWSGSPTSCQK 156
Query: 603 TRGPTWT 623
R P T
Sbjct: 157 KRCPALT 163
>SB_13265| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 339
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 369 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSS 503
G+G +++G + G L A + G+G + AG+ ++ + GF+S
Sbjct: 202 GVGVSLSGIGVLIGGPLAGVAGLVGVGVVGAGAGVV---SRGFTS 243
>SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9)
Length = 125
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 326 HDHGGHQGHVTNVHWARGHNGGVSHDHRGYT 418
HD+GGH H+ GH+ G+ HD+ G+T
Sbjct: 83 HDYGGHD------HYDGGHHDGMHHDY-GHT 106
>SB_37199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 311 NGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 415
+G SHD G H + + GH+G SHD G+
Sbjct: 5 DGVDSHDDDGDDSHDDDGDDSHGHDGVESHDGYGF 39
>SB_725| Best HMM Match : Apolipoprotein (HMM E-Value=0.51)
Length = 567
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Frame = +3
Query: 411 ATLGPSATITGLGTMMAGSAMITGETAGFSST---FDCSGSTL-STGVALAASLMLIRMW 578
AT G TGLGT G+ AGF +T F +G+ +TG +
Sbjct: 76 ATTGFGTATTGLGTSAFGTTGTGFGAAGFGNTGTGFGTTGTGFGTTGTGFGTTGTGFGTI 135
Query: 579 TRGVSCPGTRGPTWTGDGTMG 641
G++ G G T TG GT G
Sbjct: 136 GTGLATAGF-GTTGTGFGTTG 155
>SB_50253| Best HMM Match : HYR (HMM E-Value=2.6e-20)
Length = 525
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 441 GLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASLMLIRMWTRGVSCPGTRGPTW 620
G G ++ ITG S ++C+GS S G A+A + + + + GV+ G G +
Sbjct: 413 GSGAVIGKKLTITGALKENSGLYECTGSN-SWGNAIAVASLTVEISGSGVAV-GDEGQSL 470
Query: 621 T 623
T
Sbjct: 471 T 471
>SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1483
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 302 RGHNGRVSHDHGGHQGHVTNVHWA 373
+G N + + GH HVTNV WA
Sbjct: 875 KGKNAKFKK-YPGHSAHVTNVRWA 897
>SB_9681| Best HMM Match : IncA (HMM E-Value=0.58)
Length = 215
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 369 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMIT 479
G+G +++G + G L A + G+G + AG+ +++
Sbjct: 78 GVGVSLSGIGVLIGGPLAGVAGLVGVGVVGAGAGVVS 114
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +2
Query: 296 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 412
W RG G + GG G + W R GG+ G
Sbjct: 24 WGRGQGGGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGG 62
>SB_19891| Best HMM Match : Keratin (HMM E-Value=0.96)
Length = 209
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 369 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMIT 479
G+G +++G + G L A + G+G + AG+ +++
Sbjct: 94 GVGVSLSGIGVLIGGPLAGVAGLVGVGVVGAGAGIVS 130
>SB_15566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1265
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 323 SHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRS 424
S H H+G VTN ++ DHRG RS
Sbjct: 831 SDSHRDHRGVVTNDRYSYYGRSDYQRDHRGLRRS 864
>SB_13184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1297
Score = 27.5 bits (58), Expect = 9.8
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +3
Query: 369 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVAL 548
G T AG GAT +AT T GT + G + G+T+ SS F +T +TG
Sbjct: 377 GTTTTQAGGLFGGGATGFGAATGT-TGTGLFGQSTGFGQTSQQSSLFGNKLATSTTGFGA 435
Query: 549 AASLMLIRMWTRGVSCPGTR-GPTWTGDGTMG 641
+ L+ + P T G T G GT G
Sbjct: 436 TNTGGLLGL---SAQKPATGFGTTGLGTGTFG 464
>SB_8396| Best HMM Match : Spb1_C (HMM E-Value=0.65)
Length = 1007
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = -3
Query: 604 VPGQLTPLVHILININDAASATPVESVEPEQSNVEEK 494
+ G L +++++ND +A PVE+V+ +Q++ + K
Sbjct: 4 IDGLSNTLDDLILSLNDVDTAEPVENVDIDQADADCK 40
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,235,382
Number of Sequences: 59808
Number of extensions: 229871
Number of successful extensions: 843
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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