Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a03f
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.5  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   4.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   4.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   4.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   6.1  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   6.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.1  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 84  YNNKTKLVCYYYFRIPH 34
           Y N T+ VC  + RIPH
Sbjct: 221 YQNATRKVCGVWKRIPH 237


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 75  KTKLVCYYYF 46
           KTK  CYYY+
Sbjct: 109 KTKRYCYYYY 118


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 354 HVANHEHRRRLFEVATSKFGGVDIL 428
           H + H+H     +++  K GG D+L
Sbjct: 101 HSSIHQHHHDPMKMSLDKSGGSDLL 125


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/44 (22%), Positives = 18/44 (40%)
 Frame = -1

Query: 256 PSLPSLLAIAYPIPSVDAVTIATFPLNRVL*IARTGFAEVDMFK 125
           P+L     + Y    ++A T    PLN +  + R  +  +   K
Sbjct: 45  PALQFCTHLIYGYAGINAETFKAQPLNELFDVTRDNYRHITELK 88


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 354 HVANHEHRRRLFEVATSKFGGVDIL 428
           H + H+H     +++  K GG D+L
Sbjct: 252 HSSIHQHHHDPMKMSLDKSGGSDLL 276


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 354 HVANHEHRRRLFEVATSKFGGVDIL 428
           H + H+H     +++  K GG D+L
Sbjct: 311 HSSIHQHHHDPMKMSLDKSGGSDLL 335


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = -1

Query: 280 RLQMTTEAPSLPSLLAIAYPIPSVDAVTIATFPLNRVL*IARTGFAEVDMFK 125
           + ++T   P+L     + Y   ++D  T    PLN    + +  + +V   K
Sbjct: 42  KFEITDLEPALQYCTHLIYGYAAIDEETYKLTPLNEQFDVIKDNYRKVTDLK 93


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 519 SSWLLAKEAYPELVKR 566
           S W++A +A PE+ KR
Sbjct: 38  SRWMVAGKADPEMPKR 53


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 519 SSWLLAKEAYPELVKR 566
           S W++A +A PE+ KR
Sbjct: 38  SRWMVAGKADPEMPKR 53


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 102 RTS*YHYNNKTKLVCYYYFR 43
           R S YHYN  T   C  +FR
Sbjct: 194 RASGYHYNALTCEGCKGFFR 213


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 15  TSCKSNYVVFENNNNKLVLFCCYSGTKRS 101
           +S + NY++  N NN  ++   Y   K S
Sbjct: 13  SSTQPNYLILSNKNNTYLVLNKYLLVKHS 41


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 66  LVCYYYFRIPHSLIYTMF 13
           LVC YYF   H L    F
Sbjct: 255 LVCIYYFYYMHLLFCCAF 272


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 403 VSLAEWISWYQTPRSI 450
           V++ + I W Q PR+I
Sbjct: 456 VTMTQVIQWIQNPRTI 471


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,890
Number of Sequences: 336
Number of extensions: 3084
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)