Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a03f
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 64 2e-11
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 56 5e-09
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 54 2e-08
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 51 1e-07
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 51 2e-07
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 51 2e-07
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 2e-05
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 42 7e-05
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 40 3e-04
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 40 3e-04
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 35 0.008
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 35 0.011
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 33 0.033
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 33 0.043
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 31 0.100
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 29 0.70
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 27 1.6
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 1.6
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 27 2.1
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 2.8
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 26 3.7
SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb... 26 5.0
SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyc... 25 6.5
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 25 6.5
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 25 6.5
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 6.5
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 25 8.7
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 64.1 bits (149), Expect = 2e-11
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Frame = +3
Query: 183 GKVAIVTASTEGIGYAIAKRLGSEGASV-VICSRKESNVGKAVQSLRSEGITVEGVVCHV 359
GK ++T + GIG++IAK + G++V ++ R + + A + G+ + C +
Sbjct: 9 GKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSCPI 68
Query: 360 ANHEHRRRLFEVATSKFGG-VDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLA 536
N A + GG +D++ + D +E +W K+ +N+ ++ A
Sbjct: 69 ENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTA 128
Query: 537 KEAYPELVKRGGGSIVFISSIAAY 608
+ A K+G GS++F +S++ +
Sbjct: 129 QAAGHHFKKQGKGSLIFTASMSGH 152
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 55.6 bits (128), Expect = 5e-09
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Frame = +3
Query: 162 IQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVI-CSRKESNVGKAVQSL-RSEGIT 335
+ S + + K ++T GIG A A EG+ +VI C +E + + + L EG
Sbjct: 35 VGSGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRN 94
Query: 336 VEGVVCHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNV 515
+ ++ R L + A K G +D+L I D D++ WD F N+
Sbjct: 95 CWIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNI 154
Query: 516 KSSWLLAKEAYPELVKRGGGSIVFISSIAAY 608
S + + K A + + G SIV SSI AY
Sbjct: 155 FSFFWVTKAAISHM--KSGSSIVNCSSINAY 183
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 53.6 bits (123), Expect = 2e-08
Identities = 30/139 (21%), Positives = 54/139 (38%)
Frame = +3
Query: 180 SGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHV 359
+ KV + GIG ++ K L S + V S ++ +Q V+ V V
Sbjct: 4 TNKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHPNVKTVELDV 63
Query: 360 ANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAK 539
+ + + G+D+L +++ E+VW+ + NV + K
Sbjct: 64 TSQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPIHVFK 123
Query: 540 EAYPELVKRGGGSIVFISS 596
YP L K+ ++F SS
Sbjct: 124 AFYPLLTKKKTRQVIFTSS 142
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 51.2 bits (117), Expect = 1e-07
Identities = 40/140 (28%), Positives = 61/140 (43%)
Frame = +3
Query: 186 KVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVAN 365
KV ++T S++GIG A A+ L + + + + + + V+G V V
Sbjct: 7 KVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDVTEVG- 65
Query: 366 HEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKEA 545
+ E A KFG +D + I D D W K+FD+N S K A
Sbjct: 66 ----KASIETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKYA 121
Query: 546 YPELVKRGGGSIVFISSIAA 605
P L ++ G+IV +SS AA
Sbjct: 122 IPHL-RKTKGTIVIVSSGAA 140
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 50.8 bits (116), Expect = 2e-07
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Frame = +3
Query: 180 SGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHV 359
+ K+ + GIG ++ K L + +VV S ++ +Q V + V
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDV 63
Query: 360 ANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAK 539
++ E + T VD+L +++T + VW+ + NV + +
Sbjct: 64 SSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVYQ 123
Query: 540 EAYPELVKRGGGS-IVFISSIA 602
YP L+K+G IVF SS+A
Sbjct: 124 AFYP-LIKKGRSKIIVFTSSLA 144
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 50.8 bits (116), Expect = 2e-07
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Frame = +3
Query: 180 SGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHV 359
+ K+ + GIG ++ K L + +VV S ++ +Q V + +
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHSNVHIIKLDI 63
Query: 360 ANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAK 539
++ E + G VD+L +L+T + VW+ + NV + +
Sbjct: 64 SSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIHVYQ 123
Query: 540 EAYPELVKRGGGS-IVFISSI 599
YP LVK+G IVF SS+
Sbjct: 124 AFYP-LVKKGESKIIVFTSSL 143
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 43.6 bits (98), Expect = 2e-05
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 180 SGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSE 326
+GKVA+VT S+ GIGY A L +GA V + R E K ++ + E
Sbjct: 41 TGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDE 89
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 41.9 bits (94), Expect = 7e-05
Identities = 35/140 (25%), Positives = 57/140 (40%)
Frame = +3
Query: 183 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVA 362
GK A+V GIG+AI GA+ I A + ++ G+ C V
Sbjct: 21 GKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKEIAQANGVKTYTCKCDVT 80
Query: 363 NHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKE 542
+ F F +DI+ I T E+ ++I +VN+ + +A
Sbjct: 81 IPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEI-NVNLLGVFNVAHN 139
Query: 543 AYPELVKRGGGSIVFISSIA 602
A P K+G GS+V +S++
Sbjct: 140 AGPIFQKQGHGSLVATASMS 159
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 39.9 bits (89), Expect = 3e-04
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Frame = +3
Query: 195 IVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVANHEH 374
++T S++G+GYA+ K ++G +V+ CSR A ++ E + + V + +
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIACSR-------APDTITIEHSKLLKLKLDVTDVKS 61
Query: 375 RRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKEAYPE 554
F+ A +FG VDI+ E++ + +VN + KEA
Sbjct: 62 VETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEM-HRQMNVNFWGVAYITKEALNL 120
Query: 555 LVKRG-GGSIVFISSIAAY 608
+ + G GG I+ ISS+A Y
Sbjct: 121 MRESGKGGRILQISSVAGY 139
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 39.9 bits (89), Expect = 3e-04
Identities = 28/141 (19%), Positives = 60/141 (42%)
Frame = +3
Query: 183 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVA 362
GK +V + +GIG++IA G +V+I KA + G+ V + ++
Sbjct: 21 GKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLKIDIS 80
Query: 363 NHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKE 542
+ E F + ++ +LD+ ++K+ ++N S + +A
Sbjct: 81 RSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRS-VLDSPPHEFEKVMNINTNSVYRVAYY 139
Query: 543 AYPELVKRGGGSIVFISSIAA 605
K+G G+++ +S++A
Sbjct: 140 MGKIFKKQGFGNLIATASMSA 160
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 35.1 bits (77), Expect = 0.008
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 174 RFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKE 287
+ +G V +VT + GIG + ++L S GA VVI R E
Sbjct: 72 KMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTE 109
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 34.7 bits (76), Expect = 0.011
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 195 IVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGI 332
+VT ++G+G AIAK L GA+V I +R + + +AV L I
Sbjct: 26 LVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKI 71
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 33.1 bits (72), Expect = 0.033
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 183 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRS 323
G A+VT +T+GIG A +L G +VV+ SR + + + L +
Sbjct: 57 GYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELET 103
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 32.7 bits (71), Expect = 0.043
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = -1
Query: 508 TSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLVATSNNRLLCS*LAT*QTTPSTVM 329
T + +T SS S + +++F + STP +L +++++ T +TPST+
Sbjct: 249 TESTFYETKSSTSSVPTQTIDSSSFTS--STPVSLTSSSTSSSGSSQDSTTIDSTPSTIA 306
Query: 328 PSLRRLCTAFPTLLSFRLQMTTEAPSLPSLLAIAYP 221
S + T+ P +TT APSL S L YP
Sbjct: 307 TSTLQPTTSSP--------ITTSAPSLSSALPTTYP 334
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 31.5 bits (68), Expect = 0.100
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Frame = +3
Query: 183 GKVAIVTASTEGIGYAIAK---RLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVC 353
G+V ++T + GIG + K LG A + I S V A +L+++
Sbjct: 5 GRVVLITGAAGGIGKVLCKMFTELGDRVAGIDIVD--PSKVQDAALALQAD--------- 53
Query: 354 HVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLL 533
V+ + E G +D+L + WD + ++ ++L
Sbjct: 54 -VSKADQIETAIEKVIQTLGPIDVLINNAGLADDTP-FEQLSHESWDHDVSLVLRGNYLT 111
Query: 534 AKEAYPELVKRG-GGSIVFISSI 599
+ P + K+G GGSIV I S+
Sbjct: 112 QRYVIPHMAKQGKGGSIVNIGSV 134
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 28.7 bits (61), Expect = 0.70
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 228 AIAKRLGSEGASVVICSRKESNVGKAVQSLRS-EGITVEGVVCHVA-NHEHRRRLFEVAT 401
+I LGS S+++ SN+ + ++ ++S +G E + H + N +RR F+ T
Sbjct: 804 SIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFEVLPLHASLNTSEQRRCFKTYT 863
Query: 402 SK 407
+
Sbjct: 864 KR 865
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 318 RSEGITVEGVVCHVANHEHRRRLFEVATSKFGGVDI 425
R + T+ CH +N R+RL + + FGG+ +
Sbjct: 23 RCQTCTLFQADCHYSNRARRKRLVQRSKETFGGITL 58
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.5 bits (58), Expect = 1.6
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -1
Query: 559 TSSGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLVATSNNR 380
TSS +S+A S T +SN++S +S A + + + S N +ATS +
Sbjct: 352 TSSAESSIATSP--ITSSSNVVSSISTSSMDSSAVSSYSVVQSSLASIISNAYIATSKSG 409
Query: 379 LL--CS*LAT*QTTPSTVMPSLRR 314
L S L T+ ST + SL R
Sbjct: 410 LNSGVSTLLASPTSSSTFVTSLLR 433
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 305 SFPNV--ALFPAADDYGSTFTSQPLSYCVPNSFSRCCYNSHLPTEPSALNCTNRV 147
SFP++ A+ P D + + + L+Y V +C ++S E AL N++
Sbjct: 74 SFPDLQKAVKPHVDSFNALTNAGLLNYAVKEIGEKCAFDSITQEEGGALKFGNKI 128
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 24 KSN-YVVFENNNNKLVLFCCYSGTKRSVVLL 113
KSN ++ F + N VL C++G RSV L+
Sbjct: 112 KSNKFIAFALSKNAKVLVHCFAGISRSVTLV 142
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 3.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 122 EFKHVNFSKPCSCNSEHSVQW 184
+FKHV+F P SC+ + W
Sbjct: 399 DFKHVSFKLPTSCSYCREIIW 419
>SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 955
Score = 25.8 bits (54), Expect = 5.0
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -1
Query: 577 LPPPLLTSSGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLV 398
LP LL S L NSQEL+ + N + T + +A+A L + P+L +
Sbjct: 831 LPDSLLKSLADLLLKNSQELYIILFNGMVFTFPRDNISDASAVLIPLIRLVFAADPSLCI 890
Query: 397 ATSNNRL 377
+N L
Sbjct: 891 KYMSNVL 897
>SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1088
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 295 LGKLCRASEARALQWKESSVTSPI 366
L +LCR R LQ+++ ++TS +
Sbjct: 764 LNELCRMENKRLLQYEDRAITSEV 787
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 90 TKRSVVLLINKSLNMSTSANPVRAIQSTRFSGKVAIVT-----ASTEGIGYAIAKRL 245
T +L + +N+ST +R + S F+ + +VT ST+GI Y I L
Sbjct: 967 TSLKTMLTSKEEINLSTLHTQIRLLLSCLFNQLIEVVTEDQVDESTKGILYEIMSTL 1023
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 195 IVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSL 317
++T + G+G IA+ +G I R E ++ + +QSL
Sbjct: 5 LITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSL 45
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 322 LRRLCTAFPTLLSFRLQ 272
L RLC +FPTL S+ L+
Sbjct: 900 LHRLCRSFPTLQSYTLK 916
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 25.0 bits (52), Expect = 8.7
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +3
Query: 60 KLVLFCCYSGTKRSVVLLINKSLNMSTSANPVRAIQSTRFSGKVAIVTASTEGIGYAIAK 239
+L+ C YSG ++ + T ++ +R + +S +++ + I
Sbjct: 468 ELMKICHYSGDSDISHFPKLQTALVETVSDLLRENLTPTYSFVESLIAIQSAYINTNHPD 527
Query: 240 RLGSEGASVVICSRKESN 293
LG +GA V+ SRKE N
Sbjct: 528 FLGVQGAMAVVLSRKEQN 545
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,594,300
Number of Sequences: 5004
Number of extensions: 53174
Number of successful extensions: 179
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -