Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a02r
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   1.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   2.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   2.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.1  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   4.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.4  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
 Frame = -1

Query: 331 LYKAWYRQIPYIVKDYDI-----PKS---EAQCREKLKELFIKNKHVTDIRVIDMLVIKG 176
           +YK++   I    KD ++     PKS   E  C  K  E+F       D   +   V KG
Sbjct: 453 MYKSYPNYIDKETKDMNLEISTRPKSNTVENACVLKNTEIFKDKSDWFDYSEVSKWVQKG 512

Query: 175 QMELKESVN 149
           Q+ LKE  N
Sbjct: 513 QICLKEKEN 521


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 144 GNKRGTLWPTSNQQKNLNQKISFRNSFLETNDLFI 40
           G  +GT +P +   K   QK+   +   +  D F+
Sbjct: 144 GELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFL 178


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 144 GNKRGTLWPTSNQQKNLNQKISFRNSFLETNDLFI 40
           G  +GT +P +   K   QK+   +   +  D F+
Sbjct: 160 GELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFL 194


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 107 WFEVGHNVPLLFPYV 151
           ++EVG NVP  F ++
Sbjct: 310 YYEVGSNVPFNFKFI 324


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 126 LWPTSNQQKNLNQKISFRNS 67
           +WP    Q N N   +F+NS
Sbjct: 150 IWPFKEYQMNGNNITNFKNS 169


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 160 LSTPFDP**PAYQ*LEYQSH 219
           + TPFDP  P    ++ QSH
Sbjct: 775 VQTPFDPDVPIELQIQKQSH 794


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,054
Number of Sequences: 438
Number of extensions: 2755
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)