Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a02f
(544 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein. 136 4e-32
CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein. 136 4e-32
CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein. 136 4e-32
BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein. 136 4e-32
AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase (ubi... 136 4e-32
AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone oxidore... 136 4e-32
BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5 ... 40 0.006
BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5 ... 40 0.006
BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2 ... 33 0.65
BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2 ... 33 0.65
AF285118-1|AAG01155.1| 91|Homo sapiens CGI-203 protein. 29 8.0
AF170070-1|AAF25797.1| 91|Homo sapiens unknown protein. 29 8.0
>CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 136 bits (330), Expect = 4e-32
Identities = 57/121 (47%), Positives = 87/121 (71%)
Frame = +1
Query: 85 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 264
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 265 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 444
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 445 E 447
+
Sbjct: 127 D 127
>CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 136 bits (330), Expect = 4e-32
Identities = 57/121 (47%), Positives = 87/121 (71%)
Frame = +1
Query: 85 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 264
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 265 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 444
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 445 E 447
+
Sbjct: 127 D 127
>CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein.
Length = 154
Score = 136 bits (330), Expect = 4e-32
Identities = 57/121 (47%), Positives = 87/121 (71%)
Frame = +1
Query: 85 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 264
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 33 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 92
Query: 265 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 444
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 93 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 152
Query: 445 E 447
+
Sbjct: 153 D 153
>BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein.
Length = 128
Score = 136 bits (330), Expect = 4e-32
Identities = 57/121 (47%), Positives = 87/121 (71%)
Frame = +1
Query: 85 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 264
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 265 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 444
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 445 E 447
+
Sbjct: 127 D 127
>AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 6, 14kDa protein.
Length = 154
Score = 136 bits (330), Expect = 4e-32
Identities = 57/121 (47%), Positives = 87/121 (71%)
Frame = +1
Query: 85 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 264
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 33 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 92
Query: 265 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 444
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 93 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 152
Query: 445 E 447
+
Sbjct: 153 D 153
>AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B14 protein.
Length = 128
Score = 136 bits (330), Expect = 4e-32
Identities = 57/121 (47%), Positives = 87/121 (71%)
Frame = +1
Query: 85 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 264
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 265 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 444
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 445 E 447
+
Sbjct: 127 D 127
>BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 39.9 bits (89), Expect = 0.006
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 151 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 330
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 331 ELKE 342
+KE
Sbjct: 60 VMKE 63
>BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 39.9 bits (89), Expect = 0.006
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 151 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 330
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 331 ELKE 342
+KE
Sbjct: 60 VMKE 63
>BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 33.1 bits (72), Expect = 0.65
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 151 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 330
R +VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 331 ELKE 342
+LKE
Sbjct: 75 QLKE 78
>BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 33.1 bits (72), Expect = 0.65
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 151 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 330
R +VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 331 ELKE 342
+LKE
Sbjct: 75 QLKE 78
>AF285118-1|AAG01155.1| 91|Homo sapiens CGI-203 protein.
Length = 91
Score = 29.5 bits (63), Expect = 8.0
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 142 AEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIK 321
A +R +VLSLY+A R+ K + ++++ F +NK+V D I LV K
Sbjct: 3 ASSRAQVLSLYRAMLRE----SKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNK 58
Query: 322 GQMEL 336
+ +L
Sbjct: 59 AKRDL 63
>AF170070-1|AAF25797.1| 91|Homo sapiens unknown protein.
Length = 91
Score = 29.5 bits (63), Expect = 8.0
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 142 AEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIK 321
A +R +VLSLY+A R+ K + ++++ F +NK+V D I LV K
Sbjct: 3 ASSRAQVLSLYRAMLRE----SKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNK 58
Query: 322 GQMEL 336
+ +L
Sbjct: 59 AKRDL 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,888,865
Number of Sequences: 237096
Number of extensions: 1419853
Number of successful extensions: 3978
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3978
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -