Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a01r
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.9  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   9.1  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -1

Query: 455 EGASNVVVNDVTFNILRSKFSVDLTLPKLSASSV-AVNGEATIFGRELAVASSGSLVVED 279
           EG S +V++  TFN L S      T  K S+SSV      ATI   EL       L ++D
Sbjct: 310 EGVSCLVIDRETFNQLISSLDEIRTRYKDSSSSVEGWENRATI--PELN-EEFRDLRLQD 366

Query: 278 LRLVSTVSI 252
           LR ++T+ +
Sbjct: 367 LRPLATLGV 375


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 705 NEGLRICTCYSRCQRR 658
           N  + +C C  +C RR
Sbjct: 98  NSTIAVCVCMRKCPRR 113


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 3   NFNHTH*GGCLQNIVDDEEDDAL 71
           NFN  +    +Q ++DD E D L
Sbjct: 78  NFNEKNTRDIVQAVLDDNETDQL 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,562
Number of Sequences: 438
Number of extensions: 3379
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)