Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_G06
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49099-1|CAA88921.1| 368|Homo sapiens spermine synthase protein. 99 7e-21
U53331-1|AAD08634.1| 349|Homo sapiens spermidine aminopropyltra... 99 7e-21
BC085621-1|AAH85621.1| 366|Homo sapiens spermine synthase protein. 99 7e-21
BC009898-1|AAH09898.1| 366|Homo sapiens spermine synthase protein. 99 7e-21
AD001528-1|AAB61308.1| 366|Homo sapiens spermidine aminopropylt... 99 7e-21
M64231-1|AAA60574.1| 302|Homo sapiens spermidine synthase protein. 34 0.39
M34338-1|AAA36633.1| 302|Homo sapiens spermidine synthase protein. 34 0.39
BC033106-1|AAH33106.1| 302|Homo sapiens spermidine synthase pro... 34 0.39
BC000309-1|AAH00309.1| 302|Homo sapiens spermidine synthase pro... 34 0.39
AL109811-6|CAI22104.1| 302|Homo sapiens spermidine synthase pro... 34 0.39
>Z49099-1|CAA88921.1| 368|Homo sapiens spermine synthase protein.
Length = 368
Score = 99 bits (238), Expect = 7e-21
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Frame = +1
Query: 229 EDGSLKLLTGNKGTTVSVRMFDRGFITLNIEFYKG---GNEESVIDHKTAKELEXXXXXX 399
+ G L T G+ ++R++ G + L+++ Y G G EE ID K E
Sbjct: 46 DHGYLATYTNKNGSFANLRIYPHGLVLLDLQSYDGDAQGKEE--IDSILNKVEERMKELS 103
Query: 400 XXXXXXQTYIP--LKRCLFGRYYPSSDGRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNM 573
+P ++ RY+P++DGRL+EYDIDEVV+D++SP+Q ++I+HSK GN+
Sbjct: 104 QDSTGRVKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNI 163
Query: 574 LVLDDLQNISEADLIYTETLMQRNKE 651
L+L N++E+DL YT +M KE
Sbjct: 164 LILSGDVNLAESDLAYTRAIMGSGKE 189
>U53331-1|AAD08634.1| 349|Homo sapiens spermidine
aminopropyltransferase protein.
Length = 349
Score = 99 bits (238), Expect = 7e-21
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Frame = +1
Query: 229 EDGSLKLLTGNKGTTVSVRMFDRGFITLNIEFYKG---GNEESVIDHKTAKELEXXXXXX 399
+ G L T G+ ++R++ G + L+++ Y G G EE ID K E
Sbjct: 27 DHGYLATYTNKNGSFANLRIYPHGLVLLDLQSYDGDAQGKEE--IDSILNKVEERMKELS 84
Query: 400 XXXXXXQTYIP--LKRCLFGRYYPSSDGRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNM 573
+P ++ RY+P++DGRL+EYDIDEVV+D++SP+Q ++I+HSK GN+
Sbjct: 85 QDSTGRVKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNI 144
Query: 574 LVLDDLQNISEADLIYTETLMQRNKE 651
L+L N++E+DL YT +M KE
Sbjct: 145 LILSGDVNLAESDLAYTRAIMGSGKE 170
>BC085621-1|AAH85621.1| 366|Homo sapiens spermine synthase protein.
Length = 366
Score = 99 bits (238), Expect = 7e-21
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Frame = +1
Query: 229 EDGSLKLLTGNKGTTVSVRMFDRGFITLNIEFYKG---GNEESVIDHKTAKELEXXXXXX 399
+ G L T G+ ++R++ G + L+++ Y G G EE ID K E
Sbjct: 44 DHGYLATYTNKNGSFANLRIYPHGLVLLDLQSYDGDAQGKEE--IDSILNKVEERMKELS 101
Query: 400 XXXXXXQTYIP--LKRCLFGRYYPSSDGRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNM 573
+P ++ RY+P++DGRL+EYDIDEVV+D++SP+Q ++I+HSK GN+
Sbjct: 102 QDSTGRVKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNI 161
Query: 574 LVLDDLQNISEADLIYTETLMQRNKE 651
L+L N++E+DL YT +M KE
Sbjct: 162 LILSGDVNLAESDLAYTRAIMGSGKE 187
>BC009898-1|AAH09898.1| 366|Homo sapiens spermine synthase protein.
Length = 366
Score = 99 bits (238), Expect = 7e-21
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Frame = +1
Query: 229 EDGSLKLLTGNKGTTVSVRMFDRGFITLNIEFYKG---GNEESVIDHKTAKELEXXXXXX 399
+ G L T G+ ++R++ G + L+++ Y G G EE ID K E
Sbjct: 44 DHGYLATYTNKNGSFANLRIYPHGLVLLDLQSYDGDAQGKEE--IDSILNKVEERMKELS 101
Query: 400 XXXXXXQTYIP--LKRCLFGRYYPSSDGRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNM 573
+P ++ RY+P++DGRL+EYDIDEVV+D++SP+Q ++I+HSK GN+
Sbjct: 102 QDSTGRVKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNI 161
Query: 574 LVLDDLQNISEADLIYTETLMQRNKE 651
L+L N++E+DL YT +M KE
Sbjct: 162 LILSGDVNLAESDLAYTRAIMGSGKE 187
>AD001528-1|AAB61308.1| 366|Homo sapiens spermidine
aminopropyltransferase protein.
Length = 366
Score = 99 bits (238), Expect = 7e-21
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Frame = +1
Query: 229 EDGSLKLLTGNKGTTVSVRMFDRGFITLNIEFYKG---GNEESVIDHKTAKELEXXXXXX 399
+ G L T G+ ++R++ G + L+++ Y G G EE ID K E
Sbjct: 44 DHGYLATYTNKNGSFANLRIYPHGLVLLDLQSYDGDAQGKEE--IDSILNKVEERMKELS 101
Query: 400 XXXXXXQTYIP--LKRCLFGRYYPSSDGRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNM 573
+P ++ RY+P++DGRL+EYDIDEVV+D++SP+Q ++I+HSK GN+
Sbjct: 102 QDSTGRVKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNI 161
Query: 574 LVLDDLQNISEADLIYTETLMQRNKE 651
L+L N++E+DL YT +M KE
Sbjct: 162 LILSGDVNLAESDLAYTRAIMGSGKE 187
>M64231-1|AAA60574.1| 302|Homo sapiens spermidine synthase protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.39
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 475 GRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNMLVLDDLQNISEAD 612
G+ L +++++ + S +Q + + SK+ GN+LVLD + +E D
Sbjct: 30 GQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
>M34338-1|AAA36633.1| 302|Homo sapiens spermidine synthase protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.39
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 475 GRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNMLVLDDLQNISEAD 612
G+ L +++++ + S +Q + + SK+ GN+LVLD + +E D
Sbjct: 30 GQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
>BC033106-1|AAH33106.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.39
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 475 GRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNMLVLDDLQNISEAD 612
G+ L +++++ + S +Q + + SK+ GN+LVLD + +E D
Sbjct: 30 GQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
>BC000309-1|AAH00309.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.39
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 475 GRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNMLVLDDLQNISEAD 612
G+ L +++++ + S +Q + + SK+ GN+LVLD + +E D
Sbjct: 30 GQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
>AL109811-6|CAI22104.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.39
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 475 GRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNMLVLDDLQNISEAD 612
G+ L +++++ + S +Q + + SK+ GN+LVLD + +E D
Sbjct: 30 GQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,540,414
Number of Sequences: 237096
Number of extensions: 1514290
Number of successful extensions: 2680
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2680
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -