Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_F23
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 268 1e-70
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 243 3e-63
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 227 1e-58
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 211 1e-53
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 211 1e-53
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 174 1e-42
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 172 5e-42
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 3e-35
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 136 6e-31
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 128 1e-28
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 2e-27
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 123 3e-27
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 122 6e-27
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 118 1e-25
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 116 6e-25
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 111 1e-23
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 4e-23
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 109 6e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 1e-22
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 108 1e-22
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 107 2e-22
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 106 5e-22
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 103 3e-21
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 102 9e-21
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 102 9e-21
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 100 3e-20
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 99 1e-19
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 99 1e-19
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 98 1e-19
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 96 6e-19
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 92 9e-18
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 1e-15
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 80 5e-14
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 77 3e-13
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 1e-12
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 6e-07
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 7e-06
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 52 9e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 52 2e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 52 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 4e-05
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 50 6e-05
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 49 8e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 48 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 1e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 48 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 8e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 45 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.004
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.006
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.007
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.022
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.022
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 40 0.039
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 39 0.090
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.28
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 38 0.28
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.36
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.36
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.36
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 37 0.48
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.48
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.84
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.84
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 35 1.5
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 1.9
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.9
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 4.5
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 4.5
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 5.9
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 5.9
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.9
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 7.8
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 268 bits (656), Expect = 1e-70
Identities = 130/157 (82%), Positives = 138/157 (87%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 535
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 536 IGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
IGKPHTVPCKVTG+C SV PRGTGIVSAPV
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRL-IPAPRGTGIVSAPV 209
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 243 bits (594), Expect = 3e-63
Identities = 109/157 (69%), Positives = 136/157 (86%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 535
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 536 IGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
+G PHTVP KV+GKC SVT PRG G+V+APV
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRL-VPAPRGAGLVAAPV 182
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 227 bits (556), Expect = 1e-58
Identities = 108/131 (82%), Positives = 115/131 (87%)
Frame = +2
Query: 197 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 376
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 377 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 556
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 557 PCKVTGKCCSV 589
PCKVTG+C SV
Sbjct: 121 PCKVTGRCSSV 131
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 211 bits (515), Expect = 1e-53
Identities = 99/154 (64%), Positives = 123/154 (79%)
Frame = +2
Query: 179 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 358
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 359 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 538
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 539 GKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSA 640
G+PHT+P KV GKC SV PRG GIV++
Sbjct: 165 GEPHTIPTKVHGKCGSV-HVRLIPAPRGAGIVAS 197
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 211 bits (515), Expect = 1e-53
Identities = 99/156 (63%), Positives = 123/156 (78%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 361
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 362 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 541
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 542 KPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPVL 649
+PH++ K TGKC SVT PRG+GIV++P +
Sbjct: 150 QPHSLATKTTGKCGSVTVRL-IPAPRGSGIVASPAV 184
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 174 bits (424), Expect = 1e-42
Identities = 86/107 (80%), Positives = 92/107 (85%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
P+R+GYWGNKIGKP+TVPCKVTG C SV PRGTG+VSAPV
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCL-IPAPRGTGMVSAPV 153
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 172 bits (419), Expect = 5e-42
Identities = 86/158 (54%), Positives = 108/158 (68%), Gaps = 1/158 (0%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 535
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 536 IGKPHTVPCKVTGKCCSVTSPXEXRP-PRGTGIVSAPV 646
GKPHTV CK +GKC TS + P PRGTGI+S V
Sbjct: 135 QGKPHTVSCKGSGKC--GTSVVQVIPAPRGTGIISGSV 170
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 3e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGL 433
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 136 bits (328), Expect = 6e-31
Identities = 66/90 (73%), Positives = 73/90 (81%)
Frame = +2
Query: 377 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 556
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 557 PCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
P KVTG+C SV PRGTG VSAPV
Sbjct: 121 PGKVTGRCGSVLVRL-IPAPRGTGFVSAPV 149
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKI 241
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 128 bits (309), Expect = 1e-28
Identities = 80/149 (53%), Positives = 94/149 (63%)
Frame = +2
Query: 200 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 379
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 380 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 559
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 560 CKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
CKVTG S PR T I SAP+
Sbjct: 161 CKVTGH--GSVSLHLIPAPRDTVISSAPM 187
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 2e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 356 KQTRAGQRTRFK 391
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +2
Query: 563 KVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
KVTG+C SV PRGTGIVSAPV
Sbjct: 125 KVTGRCGSVLVRL-IPAPRGTGIVSAPV 151
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 123 bits (297), Expect = 3e-27
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +2
Query: 185 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 364
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 365 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 472
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 122 bits (295), Expect = 6e-27
Identities = 67/156 (42%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Frame = +2
Query: 188 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 367
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 368 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 541
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRR G W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 542 KPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPVL 649
+PH++P KV GK SV P+GTG+V VL
Sbjct: 130 EPHSLPFKVVGKAGSVEVDL-LPAPKGTGLVVGSVL 164
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 118 bits (284), Expect = 1e-25
Identities = 67/160 (41%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR--RGYWG 529
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 530 NKIGKPHTVPCKVTGKCCSVTSPXEXRP-PRGTGIVSAPV 646
G PH++P G C SV E P PRG G+V+ V
Sbjct: 129 CGCGSPHSIPFTAKGACGSV--KVELLPAPRGVGLVAGNV 166
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 116 bits (278), Expect = 6e-25
Identities = 61/156 (39%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
Frame = +2
Query: 188 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 367
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 368 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 541
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++R G W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 542 KPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPVL 649
KPHT+P V GK SV S P+G G+ V+
Sbjct: 122 KPHTLPFLVNGKSGSV-SVTLKPAPQGVGLAVGDVV 156
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 111 bits (268), Expect = 1e-23
Identities = 70/154 (45%), Positives = 91/154 (59%)
Frame = +2
Query: 185 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 364
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWE----------HPLIKQT 100
Query: 365 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 544
Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATGGKRL-E 152
Query: 545 PHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
PH VPC+VTG+C S+ PRGTG VSAPV
Sbjct: 153 PHMVPCRVTGRCGSLLVHL-IPAPRGTGTVSAPV 185
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 4e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 356 KQTRAGQRTRFK 391
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
Score = 33.1 bits (72), Expect = 5.9
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +2
Query: 563 KVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
KVTG+C SV PRGTGIVSAPV
Sbjct: 125 KVTGRCGSVLVRL-FSAPRGTGIVSAPV 151
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 109 bits (262), Expect = 6e-23
Identities = 66/158 (41%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Frame = +2
Query: 191 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 358
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 359 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGN 532
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++R G W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 533 KIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
+ +PH+VP V GK SV PRG G+V V
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRL-IPGPRGLGLVIGDV 170
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 1e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +2
Query: 236 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 415
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 416 NGHIG 430
NG+ G
Sbjct: 62 NGYAG 66
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +1
Query: 409 RQQRSYWFGCEVQQGSRHCHSRRYYPC*AVSSTSPKRLLG*QDRKATHRPLQGHR 573
R Y EV QG H R ++P A+ +RLLG QDR+A HRPLQG R
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDR 113
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 108 bits (259), Expect = 1e-22
Identities = 62/149 (41%), Positives = 89/149 (59%), Gaps = 3/149 (2%)
Frame = +2
Query: 194 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 373
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 374 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 547
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V R G W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 548 HTVPCKVTGKCCSVTSPXEXRP-PRGTGI 631
HTV + GK SV E +P PRG G+
Sbjct: 126 HTVALRTEGKAGSV--EVELQPAPRGLGL 152
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 107 bits (258), Expect = 2e-22
Identities = 58/131 (44%), Positives = 84/131 (64%)
Frame = -3
Query: 568 DLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 389
+LA GV + LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 388 ETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEF 209
E L+GT L L HDL++ ++Q A+EEI+DLE F+ R QV+ L+ D + A++ +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 208 GDRNPLFLVFL 176
G NP VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 106 bits (254), Expect = 5e-22
Identities = 67/155 (43%), Positives = 90/155 (58%), Gaps = 3/155 (1%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 361
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 362 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 535
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 536 IGKPHTVPCKVTGKCCSVTSPXEXRP-PRGTGIVS 637
+ H+VP KV GK SVT E P PRG G+V+
Sbjct: 161 CDQKHSVPFKVKGKGGSVT--IEIIPAPRGLGLVA 193
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 103 bits (248), Expect = 3e-21
Identities = 61/152 (40%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Frame = +2
Query: 194 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 373
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 374 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 547
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V R G W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 548 HTVPCKVTGKCCSVTSPXEXRP-PRGTGIVSA 640
+++ K GK SVT E +P P+G G+ +A
Sbjct: 177 NSLTRKAEGKAGSVT--VEIQPAPQGLGLAAA 206
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 102 bits (244), Expect = 9e-21
Identities = 70/157 (44%), Positives = 84/157 (53%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 535
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 536 IGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
IG PHT+PC VT ++ PRGTG VSA V
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASV 162
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 102 bits (244), Expect = 9e-21
Identities = 58/137 (42%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Frame = -3
Query: 586 GTTLAGDLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVA 407
GTTL L GV L+ + TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V
Sbjct: 93 GTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVT 152
Query: 406 NGNKCLETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFA 227
N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF DW R Q + + D +
Sbjct: 153 NDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQRVQEDFFDGRDLAGL 211
Query: 226 NKTAEFGDRNP--LFLV 182
+++ + G+ NP FLV
Sbjct: 212 HQSTQLGNWNPTLFFLV 228
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 100 bits (240), Expect = 3e-20
Identities = 58/116 (50%), Positives = 72/116 (62%)
Frame = +2
Query: 299 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 478
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 479 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
IIL + S+ G+ GNKI KPHTV C+VT CSV PRGT I+SAPV
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVL-VHHISAPRGTDILSAPV 109
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 98.7 bits (235), Expect = 1e-19
Identities = 56/140 (40%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Frame = +2
Query: 221 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 400
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 401 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 574
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 575 KCCSVTSPXEXRPPRGTGIV 634
+ S T P G G+V
Sbjct: 120 RSGS-TRVTLMPAPAGKGLV 138
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 98.7 bits (235), Expect = 1e-19
Identities = 64/155 (41%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 361
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 362 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 535
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 536 IGKPHTVPCKVTGKCCSVTSPXEXRP-PRGTGIVS 637
+ H+VP KV GK SV E P PRG G+V+
Sbjct: 142 CDQKHSVPFKVRGKGGSVV--IEILPAPRGLGLVA 174
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 98.3 bits (234), Expect = 1e-19
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 15/165 (9%)
Frame = +2
Query: 188 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 352
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 353 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 508
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 509 VRR--GYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVS 637
V R G W G PH++P +V GK SV + P+G GIV+
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILK-PAPKGVGIVA 167
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 96.3 bits (229), Expect = 6e-19
Identities = 67/135 (49%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +2
Query: 197 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 376
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 377 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 553
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 554 VPCKVTGKCCSVTSP 598
PCK TG S P
Sbjct: 108 YPCKRTGWSISFLFP 122
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 92.3 bits (219), Expect = 9e-18
Identities = 46/131 (35%), Positives = 81/131 (61%)
Frame = +2
Query: 248 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 427
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 428 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEX 607
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK SV +
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIK- 202
Query: 608 RPPRGTGIVSA 640
P+GTGIV++
Sbjct: 203 PAPKGTGIVAS 213
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +2
Query: 224 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 403
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 404 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 502
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 1e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +2
Query: 200 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 379
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 380 TRFKAFVAIGDNNGHIGL 433
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 79.8 bits (188), Expect = 5e-14
Identities = 69/155 (44%), Positives = 83/155 (53%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 361
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 362 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 541
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 542 KPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
TV CKVTG+C SV PP I+SAPV
Sbjct: 160 S-LTVSCKVTGQCVSVL--ICLIPPT-RNIISAPV 190
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 77.4 bits (182), Expect = 3e-13
Identities = 46/99 (46%), Positives = 56/99 (56%)
Frame = +2
Query: 353 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 532
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLG---------ET 51
Query: 533 KIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPVL 649
++ + V KVT SV PRGTGIVSAPVL
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHL-IPAPRGTGIVSAPVL 89
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +2
Query: 236 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 415
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 416 NGHIGLGVKCSKEVATAIRGAIIL 487
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 283
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 311 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 490
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 491 KLSVL--PVRRGY 523
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 6e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 194 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 307
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 500 VLPV 511
++ V
Sbjct: 72 LISV 75
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 52.4 bits (120), Expect = 9e-06
Identities = 33/113 (29%), Positives = 57/113 (50%)
Frame = +2
Query: 299 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 478
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 479 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVS 637
++ AK SV+ V G PH V K C + + GTG+++
Sbjct: 566 LVDAKKSVVRVPLVGAGT---IPHRVEAKFNAARCVMVPAAD-----GTGVLA 610
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 317 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 496
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 497 SVLPVRR 517
+++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 51.6 bits (118), Expect = 2e-05
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRP-PRGTGIVS 637
+ V K+ K T+ +V GK +P P+GTG+++
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGK--HGAGKVLIKPAPKGTGVIA 175
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/104 (31%), Positives = 53/104 (50%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVS 637
+ K +T+P ++ GK T+ GTG+++
Sbjct: 71 KISL--------KNNTIPHEIAGK-WGATTLWMAPAYEGTGVIA 105
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 314 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 493
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 494 LSVLPV 511
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 49.6 bits (113), Expect = 6e-05
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Frame = +2
Query: 194 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 373
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 374 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 544
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 545 PHTVPCKV 568
P P ++
Sbjct: 141 PSVCPMQI 148
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 49.2 bits (112), Expect = 8e-05
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 506 --PVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPP-RGTGIVSAPV 646
PV G T+P ++ G+ + TS +P GTG+++ V
Sbjct: 79 TVPVENG----------TIPHEIVGE--NSTSRVLLKPAGPGTGVIAGTV 116
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 48.4 bits (110), Expect = 1e-04
Identities = 29/51 (56%), Positives = 33/51 (64%)
Frame = -1
Query: 333 TSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 181
TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 4 TSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 506 PV 511
V
Sbjct: 77 EV 78
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 48.4 bits (110), Expect = 1e-04
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +2
Query: 323 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 502
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 503 LPVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVS 637
+ + K HT+P +V GK S + GTGI++
Sbjct: 91 VKIN--------FKGHTIPHEVIGKFKSARVILK-PSTAGTGIIA 126
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 305 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 484
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 485 LAKLSVLPV 511
AK +++ V
Sbjct: 98 EAKKNLIRV 106
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 506 PV 511
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 478
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 506 PV 511
V
Sbjct: 246 TV 247
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/40 (60%), Positives = 24/40 (60%)
Frame = +2
Query: 527 GNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGIVSAPV 646
GNKIGK H V CKVTG CC RGTGI SAPV
Sbjct: 7 GNKIGKTHIVLCKVTG-CCGSVLVHLIPAHRGTGISSAPV 45
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 311 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 490
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 491 KLSVL--PVRRG 520
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 311 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 490
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 491 KLSVLPVRR 517
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 499
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 500 VLPVRRG 520
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 506 PV 511
V
Sbjct: 128 RV 129
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 500 VLPV 511
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.007
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 506 PV 511
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 506 PV 511
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.022
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 493
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 40.3 bits (90), Expect = 0.039
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -3
Query: 421 TVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 245
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 244 VDFSFANKTAEFGDRNPLFLVFL 176
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 39.1 bits (87), Expect = 0.090
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 350 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 526
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 527 GNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGI 631
N+ T+ VT K RPP G G+
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPP-GFGL 435
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.9 bits (84), Expect = 0.21
Identities = 31/104 (29%), Positives = 48/104 (46%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGI 631
++P+RR Y + T+ KV K RPP G G+
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPP-GFGL 345
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.28
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 472
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.5 bits (83), Expect = 0.28
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 500 VLPVRRGYWGNKIGKPHTV 556
++ + G+ I PH V
Sbjct: 73 LITI-ESLEGDSI--PHEV 88
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.36
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 481 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 383
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 37.1 bits (82), Expect = 0.36
Identities = 31/105 (29%), Positives = 48/105 (45%)
Frame = +2
Query: 317 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 496
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 497 SVLPVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGI 631
++ P+RR Y + T+ VT K RPP G G+
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPP-GFGL 338
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.1 bits (82), Expect = 0.36
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCCSVTSPXEXRP-PRGTGIVSA 640
V I TVP + K + S +P P+G GI+++
Sbjct: 151 RV-------PIINKSTVPHEQWAK--FLASKVMLKPAPKGKGIIAS 187
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 36.7 bits (81), Expect = 0.48
Identities = 29/94 (30%), Positives = 45/94 (47%)
Frame = +2
Query: 350 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 529
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 530 NKIGKPHTVPCKVTGKCCSVTSPXEXRPPRGTGI 631
N+ T+ +VT K RPP G G+
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPP-GFGL 408
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.48
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 500 VLPV 511
++ V
Sbjct: 81 MVRV 84
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.84
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 323 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 472
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.84
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 332 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 511
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 35.1 bits (77), Expect = 1.5
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +2
Query: 317 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 496
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 497 SVLPV----RRGYWGNKIGKPHTVPCKV 568
++ PV +R +G+ GK V K+
Sbjct: 314 NMQPVPRYEKRTIFGDVEGKVGAVQLKL 341
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 308 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 487
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 488 AKLSVL 505
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 305 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 469
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 242 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 415
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 416 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = -3
Query: 367 TCLFLYR-HDLKNLIIQGRAEEEIND-LEFFDW*RKQVNALEFVDFSFANKT 218
TCLF R HDL +LI++G ++EEI D + + ++Q + + DF A++T
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 389 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 541
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 5.9
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -3
Query: 391 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 293
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 332 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 478
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 7.8
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -2
Query: 203 QEPTLSGLPCRAHDHGRDHDRVHE-DRHGLYLHRV-----IRIRRENRHVHRLEQRPPL 45
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,180,806
Number of Sequences: 1657284
Number of extensions: 13296155
Number of successful extensions: 37304
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 34702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37009
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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