Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_F23
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   5.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.8  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 489 LSCQFYQSEEVTGVTR*ESHTPSLARSPASVV 584
           +SC  YQ+ E   V   ES  P +    A+ V
Sbjct: 369 VSCTHYQNPEYISVVNPESPYPQIGSERATPV 400


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 324 MMRFLRSCLYRNKHVPDSAHVSRHL 398
           +  ++   L + K  PD A + RHL
Sbjct: 43  LKNYVNCLLEKGKCTPDGAELKRHL 67


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 346 HDLKNLIIQGRAEEEINDLE 287
           +D K+   QG+A+ EI DLE
Sbjct: 30  YDSKSHFRQGQAKFEITDLE 49


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 KDNSASNGSGDFLAALHTQTNMTVVVANGNK 395
           K NS +NGS D +      ++    + NG+K
Sbjct: 279 KPNSTTNGSPDVIKVEPELSDSEKTLCNGSK 309


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/34 (23%), Positives = 15/34 (44%)
 Frame = +2

Query: 521 YWGNKIGKPHTVPCKVTGKCCSVTSPXEXRPPRG 622
           Y   +I +  + PC+  G C  +      + P+G
Sbjct: 180 YCQTEINECDSAPCQNGGTCLDLIGSYSCKCPKG 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,927
Number of Sequences: 336
Number of extensions: 3046
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)