Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_F22
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49073-2|CAA88887.1| 157|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 29 2.9
U39852-8|AAK39261.2| 113|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 28 5.0
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 28 5.0
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 28 5.0
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 28 5.0
AF025463-1|AAB71008.3| 871|Caenorhabditis elegans Hypothetical ... 28 6.7
Z70750-12|CAA94748.2| 363|Caenorhabditis elegans Hypothetical p... 27 8.8
AF323969-1|AAK50396.1| 363|Caenorhabditis elegans GDP-fucose tr... 27 8.8
>Z49073-2|CAA88887.1| 157|Caenorhabditis elegans Hypothetical
protein ZK970.3 protein.
Length = 157
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 460 IVRAGESLMKLVSDIKQYLILNDFPSVNEAITQ-NSKLFRTKQQECDQKLMSLRDDIAAD 636
+VRA + L+KL +D+K++LIL+DF + I Q ++ T +Q+ Q L +++
Sbjct: 82 MVRASDELLKLTADLKEFLILHDFHFLTHNIKQAEAQCEETLRQQSHQH-NCLDSEVSNI 140
Query: 637 LYDLE 651
L+DLE
Sbjct: 141 LFDLE 145
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Frame = +3
Query: 288 KEALLKSYTTRLKEDVKSMLENFEEIIKLAKV---EN--ESQLNRMTQIEQDTFEMQVR 449
K+ ++ + RL++++KS+ +NF II+ AKV +N ++Q +MT+ EM VR
Sbjct: 20 KKLIIDEFKRRLRDNIKSLNDNFFHIIQAAKVNPDDNAYKNQTGKMTEFYTTKNEMAVR 78
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/113 (20%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Frame = +3
Query: 105 LHHTVTNFVYKK*SNFRVELFCYISIVD---C--RKYNKK*YE*IKSYASLSNKEQTNMQ 269
L T+++ + + R FC S+++ C R++ + E ++ ++N+ + +
Sbjct: 235 LESTLSHLLNNSQVSARAAFFCMKSLLENYRCTVREFEMR-CEHMQKQIHIANQRRNMLI 293
Query: 270 RSLPQNKEALLKSYTTRLKEDVKSMLENFEEIIKLAKVENESQLNRMTQIEQD 428
L QN++++ SY RLKE + + + ++E + IE+D
Sbjct: 294 EELDQNQQSIEASYNNRLKEMEERCRGRIAAMEEKFRMERHEMQKEIENIEKD 346
>Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical
protein C54D10.8 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Frame = +3
Query: 225 KSYASLSNKEQTNMQRSLPQN-KEALLKSYTTRLKEDVKSMLENFEEI---------IKL 374
K A+ EQ QR Q K+ + RLK++ K LE +E IK+
Sbjct: 51 KQQAANERIEQLVAQRESEQKVKDQMAHFENMRLKQETKRSLEKMDEDLERSRELHRIKI 110
Query: 375 AKVENESQLNRMTQIEQD 428
AK+ N+ N+ EQD
Sbjct: 111 AKINNQFMQNKKDFAEQD 128
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 252 EQTNMQRSLPQNKEALLKSYTTRLKEDVKSMLENFEEIIKL-AKVENESQLNRMTQIE 422
E+T +RS+ + + RL+++++ M E+ EE+ L K+EN +L ++ E
Sbjct: 73 EETMQERSIVLEENSRQNEERDRLQKEIEKMKEDSEEVAALKQKLENTRRLLKVNMEE 130
>U39852-8|AAK39261.2| 113|Caenorhabditis elegans Hypothetical
protein K10C2.6 protein.
Length = 113
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 448 LTCISNVSCSICVILFN*DSFSTFANFIISSKFSNMLLTSSFNLVVY 308
LT S CSI + +STFANF+ +F N L + +F ++
Sbjct: 46 LTVASIKLCSIFSKIILNIFYSTFANFVFWFQFENSLKSEAFKFTLF 92
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 252 EQTNMQRSLPQNKEALLKSYTTR--LKEDVKSMLENFEEIIKLAKVENESQLN-RMTQIE 422
E+ ++R QN+ R KE++K LE E ++ AK +NE Q N + E
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLREKVQEAKRQNEMQENGLLAAYE 321
Query: 423 QDTFEMQ 443
+ F +Q
Sbjct: 322 TNIFAVQ 328
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 252 EQTNMQRSLPQNKEALLKSYTTR--LKEDVKSMLENFEEIIKLAKVENESQLN-RMTQIE 422
E+ ++R QN+ R KE++K LE E ++ AK +NE Q N + E
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLREKVQEAKRQNEMQENGLLAAYE 338
Query: 423 QDTFEMQ 443
+ F +Q
Sbjct: 339 TNIFAVQ 345
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 252 EQTNMQRSLPQNKEALLKSYTTR--LKEDVKSMLENFEEIIKLAKVENESQLN-RMTQIE 422
E+ ++R QN+ R KE++K LE E ++ AK +NE Q N + E
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLREKVQEAKRQNEMQENGLLAAYE 338
Query: 423 QDTFEMQ 443
+ F +Q
Sbjct: 339 TNIFAVQ 345
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 252 EQTNMQRSLPQNKEALLKSYTTR--LKEDVKSMLENFEEIIKLAKVENESQLN-RMTQIE 422
E+ ++R QN+ R KE++K LE E ++ AK +NE Q N + E
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLREKVQEAKRQNEMQENGLLAAYE 321
Query: 423 QDTFEMQ 443
+ F +Q
Sbjct: 322 TNIFAVQ 328
>AF025463-1|AAB71008.3| 871|Caenorhabditis elegans Hypothetical
protein K10B4.3 protein.
Length = 871
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 279 PQNKEALLKSYTTRLKEDVKSMLENFEEIIKLAKVENESQLNRMT 413
PQ ALL Y + + ++ L F +KLA NE NR T
Sbjct: 252 PQMSTALLNIYMSLISQNRTKSLSQFLPTLKLAAQSNEFINNRTT 296
>Z70750-12|CAA94748.2| 363|Caenorhabditis elegans Hypothetical
protein C50F4.14 protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 239 TGVAFNSFVSLFVIFSAVYNRDVTKQLNPKVTLLFVHKISNCVVQF 102
TGV F SL V +A+Y R V + + L ++ N +V F
Sbjct: 183 TGVIFGVLASLSVALNAIYTRKVLSSVGDCLWRLTMYNNLNALVLF 228
>AF323969-1|AAK50396.1| 363|Caenorhabditis elegans GDP-fucose
transporter protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 239 TGVAFNSFVSLFVIFSAVYNRDVTKQLNPKVTLLFVHKISNCVVQF 102
TGV F SL V +A+Y R V + + L ++ N +V F
Sbjct: 183 TGVIFGVLASLSVALNAIYTRKVLSSVGDCLWRLTMYNNLNALVLF 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,011,305
Number of Sequences: 27780
Number of extensions: 247284
Number of successful extensions: 841
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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