Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_F20
         (550 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family...    29   2.9  
U37429-7|AAA79351.2|  218|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z80223-6|CAI79238.1|  143|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical ...    27   8.9  

>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
           protein B0207.5 protein.
          Length = 3279

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +2

Query: 149 DVLPTTEFKVLKKRKKINDIPNVNNEEPNLSSELRVNEFNIQMXSKNIYEQLXKK 313
           +VL  +E++  KK    + IP+   +EP   + +  +  N+   S   Y++  KK
Sbjct: 732 EVLSNSEYEEYKKNCLSSVIPSKERQEPGGGAPMNCSTVNVDKLSDKEYKEYKKK 786


>U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family
           protein 4 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 173 KVLKKRKKINDIPNVNNEEPNLSSELRVNEFNIQMXSKNI 292
           KV + RK + DI ++     N+ SE+R+    I   S+NI
Sbjct: 224 KVDEARKDVQDIESIIRRNKNIHSEIRLILLTIARVSRNI 263


>U37429-7|AAA79351.2|  218|Caenorhabditis elegans Hypothetical
           protein F09E5.11 protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
 Frame = +2

Query: 260 EFNIQMXSKNIYEQLXKKPSSSPDPEVXKSCQESLLRHGIDXKKCSN---XLPD 412
           ++N+    KN+   L         PEV KSC+E   +  +  K   N    LPD
Sbjct: 3   QWNVSQEDKNLLRDLVAGSKEKITPEVSKSCKEFYKKDVVSYKDLVNIKTKLPD 56


>Z80223-6|CAI79238.1|  143|Caenorhabditis elegans Hypothetical
           protein F26D10.13 protein.
          Length = 143

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 134 QRFLSDVLPTTEFKVLK-KRKKINDIPNVNNEEPNLSSELRVNEFNIQMXSKN 289
           +RFLS       FK  K   K + D+  +  ++PN+S+  + N F     +K+
Sbjct: 43  KRFLSMHDSNFNFKFCKVSGKSVEDLKKILEQDPNMSTTKKSNHFVTSKVTKD 95


>AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical
           protein Y75B8A.4 protein.
          Length = 773

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +2

Query: 182 KKRKKINDIPNVNNEEPNLSSELRVNEFNIQMXSKNIYEQLXKKPS 319
           KKRK    IPNV N+   L  +L   EF+ ++ S  +Y +L +  S
Sbjct: 220 KKRK----IPNVKNQVEQLEEKLNAIEFSDEV-SDRVYSELHRLKS 260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,613,463
Number of Sequences: 27780
Number of extensions: 188841
Number of successful extensions: 410
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)