Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_F20
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   1.5  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   1.5  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   2.0  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 197 INDIP-NVNNEEPNLSSELRVNEFNIQMXSKNIYEQLXKKPSS 322
           IN++  +V +E+P   +E  + +FNI   S N  E + ++ +S
Sbjct: 47  INEVNFDVEDEKPQRYNECILKQFNIVDESGNFKENIVQELTS 89


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 197 INDIP-NVNNEEPNLSSELRVNEFNIQMXSKNIYEQLXKKPSS 322
           IN++  +V +E+P   +E  + +FNI   S N  E + ++ +S
Sbjct: 47  INEVNFDVEDEKPQRYNECILKQFNIVDESGNFKENIVQELTS 89


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 200 NDIPNVNNEEPNLSSELRVNEFNIQMXSKNIYEQLXKK 313
           N I +V NE+  L SE  + +FN      N  E + ++
Sbjct: 49  NGIIDVENEKVQLFSECLIKKFNAYDDGGNFNEVVVRE 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,489
Number of Sequences: 438
Number of extensions: 2246
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)