Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_F06
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904... 136 2e-32
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022... 31 0.61
11_04_0068 - 13116037-13116414,13116501-13116947,13117026-131177... 31 0.80
06_01_0494 + 3539804-3539949,3540466-3540826 31 1.1
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 30 1.9
02_05_0263 - 27257150-27259213 30 1.9
07_03_0720 - 20926363-20926794 29 3.2
04_04_1698 - 35458500-35458547,35458919-35458988,35459626-354597... 29 4.3
04_04_0909 - 29312875-29313135,29313235-29313556,29313676-293139... 29 4.3
01_01_0798 + 6208138-6208140,6208798-6208897,6209228-6209688 29 4.3
02_05_0847 + 32183249-32183486,32184001-32184118,32184231-321843... 28 5.6
12_02_0042 + 12738990-12739421 27 9.9
09_02_0137 - 4759112-4759735 27 9.9
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773... 27 9.9
06_03_0242 - 18610770-18611201 27 9.9
06_02_0310 + 14158693-14159316 27 9.9
05_04_0144 + 18389877-18390431 27 9.9
05_01_0408 - 3223472-3223903 27 9.9
04_03_0576 + 17374494-17374538,17374645-17374902 27 9.9
04_01_0517 + 6784158-6784589 27 9.9
>10_08_0628 +
19389508-19389637,19389774-19389850,19390332-19390438,
19390545-19390626,19390702-19390814,19391023-19391086,
19391192-19391266,19391691-19391807,19392131-19392199,
19392319-19392411,19392733-19392835,19393040-19393164,
19393317-19393366,19393477-19393543,19393663-19393742,
19394038-19394166,19394274-19394340,19394429-19394512
Length = 543
Score = 136 bits (328), Expect = 2e-32
Identities = 65/128 (50%), Positives = 87/128 (67%)
Frame = +3
Query: 270 EVRVTLLEKAAETGGHILSGACVDPIALNELIPDWKERGAPMNTPVTSDKFGLLTKSSRI 449
++ V +LEK +E G H+LSG +P AL+ELIP W++ P+ PV+SDKF LLTK+
Sbjct: 31 DLSVCVLEKGSEVGAHVLSGNVFEPRALDELIPKWRQEDTPIRVPVSSDKFWLLTKNKAW 90
Query: 450 PIPVFPGLPNYNHGNYVVRLGHLVKWLGEQAEELGAEVWPGCAGAEVLYREDGSVRGVAT 629
+P P N GNYV+ L +V+W+ +AEELG EV+PG A +E+LY E+ V GVAT
Sbjct: 91 TLPS----PFDNKGNYVISLSQMVRWMASKAEELGVEVYPGFAASEILYDENQIVTGVAT 146
Query: 630 GDVGIAKD 653
DVGIAKD
Sbjct: 147 NDVGIAKD 154
>12_02_1229 +
27197464-27197481,27200438-27201583,27201935-27202201,
27202849-27202882,27202997-27203100,27203174-27203308,
27203367-27203511,27203864-27203880
Length = 621
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = -2
Query: 189 PSPPLRVPYLSLS--ILDPYLLDVLYNGLIF*DIH-QNKAS--WLRLLASPPVEPELTIA 25
PSPP +P + L + D ++V NGL+ D H N A+ W+RL PPV P ++
Sbjct: 34 PSPPATIPGIDLDYDLDDDATIEVHCNGLLLLDRHIVNPATRQWMRL---PPVPPYASLP 90
Query: 24 TAIF 13
++
Sbjct: 91 NIMY 94
>11_04_0068 -
13116037-13116414,13116501-13116947,13117026-13117757,
13118235-13118348
Length = 556
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 655 PSLAMPTSPVATPRTDPSSRYSTSAPAHPG 566
PSLA P + ATP T+P++ +A PG
Sbjct: 5 PSLAQPPTTSATPSTEPAAATEPAASTEPG 34
>06_01_0494 + 3539804-3539949,3540466-3540826
Length = 168
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3
Query: 77 PGCVC*PPHLSSXN*Q*PPP 18
PGC PPHLS N Q PPP
Sbjct: 66 PGCSISPPHLSLHNAQYPPP 85
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 140 GSKMERDKYGTRSGGDGHPHYRWGPSGYGSCNPSKTNSS 256
GS+ R YGTR GG G H+ G S G+ +PS + ++
Sbjct: 372 GSRYRRRSYGTRGGGGG-SHFSVG-STSGTSSPSTSTTA 408
>02_05_0263 - 27257150-27259213
Length = 687
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 309 GGHILSGACVDPIALNELIPDWKERGAPMNTPVTSDKFGLLTKSSRIP-IPVFPGLPNYN 485
G I G C D N ++ + G P V F LL + S + + G Y
Sbjct: 359 GFGIRHGFCSDGDVENHILYMYSVCGKPAAARVI---FDLLEQKSLVSWTAMMKGCLPYG 415
Query: 486 HGNYVVRLGHLVKWLGEQAEEL 551
HG+ VV+L HL++ GE+ + +
Sbjct: 416 HGDEVVQLFHLMQKHGEKPDSM 437
>07_03_0720 - 20926363-20926794
Length = 143
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 522 KWLGEQAEELGAEVWPG 572
KW+G + E+ GA WPG
Sbjct: 93 KWIGGRGEDAGATAWPG 109
>04_04_1698 -
35458500-35458547,35458919-35458988,35459626-35459759,
35460671-35460712,35460786-35460824
Length = 110
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 519 VKWLGEQAEELGAEVWPGCAGAEVLYREDGSVRGV 623
VK++G +AE LG W G E L + DG V+G+
Sbjct: 43 VKFVG-RAEALGRGFWVGVQYDEPLGKHDGMVKGI 76
>04_04_0909 -
29312875-29313135,29313235-29313556,29313676-29313923,
29314032-29314259
Length = 352
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 510 GHLVKWLGEQAEELGAEVWPGCAGAEVLY 596
GH+V +G QA+ + +P C E+ Y
Sbjct: 189 GHMVSAMGRQAQHMAVNYYPPCPQPELTY 217
>01_01_0798 + 6208138-6208140,6208798-6208897,6209228-6209688
Length = 187
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 522 KWLGEQAEELGAEVWPG 572
KW G + EE GA WPG
Sbjct: 137 KWRGGRGEEAGATAWPG 153
>02_05_0847 +
32183249-32183486,32184001-32184118,32184231-32184376,
32184591-32186080
Length = 663
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -1
Query: 469 PGNTGIGILLLFVNRPNLSDVTGVFIGAPRSFQSGINSFKAIGSTQAPDNICPPVSAAFS 290
PG TG+ L + RP+ V +G PR S ++ +AP N+ P +A S
Sbjct: 129 PGFTGVADKLKHLGRPHAL----VKVGGPRWIISAVHVASNNAENEAPKNVSVPATATKS 184
>12_02_0042 + 12738990-12739421
Length = 143
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 522 KWLGEQAEELGAEVWPG 572
KW G + E+ GA WPG
Sbjct: 93 KWRGGRGEDAGATAWPG 109
>09_02_0137 - 4759112-4759735
Length = 207
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 522 KWLGEQAEELGAEVWPG 572
KW G + E+ GA WPG
Sbjct: 93 KWRGGRGEDAGATAWPG 109
>08_02_1237 +
25475219-25475916,25476127-25476320,25476407-25477302,
25477416-25477490,25477582-25477689,25477780-25477897,
25478007-25478142,25478228-25478372,25478460-25479080,
25479166-25479597
Length = 1140
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 396 NTPVTSDKFGLLTKSSRIPIPVFPGLPNYNHGNYVVRLGHLVKWLGEQAEELGAEVWPGC 575
++P TS+ G ++ RI +F P+ GN G +V WL E+ + PGC
Sbjct: 586 HSPSTSNSDGQ-DRTGRIIFKLFGKEPSTIPGNL---RGEIVNWLKHSPNEMEGYIRPGC 641
>06_03_0242 - 18610770-18611201
Length = 143
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 522 KWLGEQAEELGAEVWPG 572
KW G + E+ GA WPG
Sbjct: 93 KWRGGRGEDAGATAWPG 109
>06_02_0310 + 14158693-14159316
Length = 207
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 522 KWLGEQAEELGAEVWPG 572
KW G + E+ GA WPG
Sbjct: 93 KWRGGRGEDAGATAWPG 109
>05_04_0144 + 18389877-18390431
Length = 184
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 531 GEQAEELGAEVWPGCAGAEVLYREDGSVRGVATGD 635
G+ A+++ A W G A R DG GV T D
Sbjct: 129 GDGADDVEAAAWRGAMEAATAARHDGGRGGVLTRD 163
>05_01_0408 - 3223472-3223903
Length = 143
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 522 KWLGEQAEELGAEVWPG 572
KW G + E+ GA WPG
Sbjct: 93 KWRGGRGEDAGATAWPG 109
>04_03_0576 + 17374494-17374538,17374645-17374902
Length = 100
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 149 MERDKYGTRSGGDGHPHYRWGPSGYGSCNPS 241
M D R GG GHP + G S Y S S
Sbjct: 15 MGADDTKPREGGSGHPSFGSGGSAYASLGSS 45
>04_01_0517 + 6784158-6784589
Length = 143
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 522 KWLGEQAEELGAEVWPG 572
KW G + E+ GA WPG
Sbjct: 93 KWRGGRGEDAGATAWPG 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,606,552
Number of Sequences: 37544
Number of extensions: 406304
Number of successful extensions: 1336
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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