Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_E17
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0219 + 2353668-2354940,2356303-2356419,2356520-2356560           29   3.2  
01_06_0021 - 25634648-25634976,25635084-25635237,25635405-256356...    27   9.8  

>10_01_0219 + 2353668-2354940,2356303-2356419,2356520-2356560
          Length = 476

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -3

Query: 200 KRNSQAIPNHQPSIQKEISDLLHLTMCPKL*KFFKSTKS 84
           K++S+ IP+H P+I+ +  +  H+ + P++  F +   S
Sbjct: 346 KKDSKIIPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNS 384


>01_06_0021 -
           25634648-25634976,25635084-25635237,25635405-25635605,
           25636876-25636913,25638166-25638438,25640701-25640932
          Length = 408

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 252 YNIVTPNPVLNSKPYASVIDNYVMCGL 332
           Y +  PN V N K  A+    YVMC L
Sbjct: 135 YTVSAPNSVPNLKILATTTPTYVMCSL 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,583,454
Number of Sequences: 37544
Number of extensions: 202927
Number of successful extensions: 324
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)