Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_E14
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical pr... 37 0.011
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 32 0.41
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 31 0.94
AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical... 29 2.2
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 29 3.8
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 28 5.0
AC006627-9|AAK85464.1| 367|Caenorhabditis elegans Hypothetical ... 28 6.7
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 8.8
>U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical
protein T13C2.7 protein.
Length = 292
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 442 HPLEVSLHLLIRQ-LAVLPLGKQQIRMQDRPRICRLVQPPQHHRHSVHLPHKLLPQH-SV 615
HPLEV+L + + LP + + ++RP++C L+ PP R SV + +P H SV
Sbjct: 189 HPLEVNLPNRSKSHIGFLP---EIVVTEERPKLCLLLPPPNRRRKSVTTQNNTIPIHKSV 245
Query: 616 PVQIQVLASGS 648
Q VL+ S
Sbjct: 246 SCQQLVLSRKS 256
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = -2
Query: 623 CTGTECWGSSLCGRCTECRWC--CGGC 549
C G C CG C C C CGGC
Sbjct: 759 CDGAACGACGACGACGACGGCGGCGGC 785
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 635 KTCI---CTGTECWGSSLCGRCTECRWCCGGCT 546
K C+ CT C +S C RC+ C C CT
Sbjct: 66 KVCVQDDCTTCSCTSASRCSRCSPCCSGCCSCT 98
>AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical
protein Y41C4A.13 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = -2
Query: 356 TKCKTAK---YWCTCCGTSEAECCF 291
TKC T+ YW CCG ECCF
Sbjct: 47 TKCGTSSIFHYW-KCCGELNKECCF 70
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 629 CICTGTECWGSSLCGRC-TECRWCCGGC 549
C CT C + C RC T CR CC GC
Sbjct: 81 CCCT---CCRTCCCTRCCTCCRPCCCGC 105
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 629 CICTGTECWGSSLCGRC-TECRWCCGGC 549
C CT C + C RC T CR CC GC
Sbjct: 83 CCCT---CCRTCCCTRCCTCCRPCCCGC 107
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 629 CICTGTECWGSSLCGRC-TECRWCCGGC 549
C CT C + C RC T CR CC GC
Sbjct: 86 CCCT---CCRTCCCTRCCTCCRPCCCGC 110
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 653 CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 549
C P+ C C + C RC T CR CC GC
Sbjct: 87 CCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 122
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -2
Query: 653 CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 549
C P C C + C RC T CR CC GC
Sbjct: 88 CCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -2
Query: 653 CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 549
C P C C + C RC T CR CC GC
Sbjct: 86 CCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 121
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -2
Query: 653 CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 549
C P C C + C RC T CR CC GC
Sbjct: 87 CCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 122
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -2
Query: 653 CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 549
C P C C + C RC T CR CC GC
Sbjct: 88 CCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 547 VQPPQHHRHSVHLPHKLLPQHSVPVQIQ 630
V+PP H RHS L L H +P Q+Q
Sbjct: 282 VEPP-HRRHSHRLTRDTLRDHDLPFQLQ 308
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 344 TAKYWCTCCGTSEA-ECCFVFCVGSTK 267
T ++C CCG +CC FC G K
Sbjct: 140 TGGFFCCCCGCMCCCQCCCNFCCGKYK 166
>AC006627-9|AAK85464.1| 367|Caenorhabditis elegans Hypothetical
protein E01A2.7 protein.
Length = 367
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 448 LEVSLHLLIRQLAVLPLGKQQIRMQDRPRICRLVQPPQHHRHSVHLPHKL 597
L VS+H + L L + K+ RP CR ++ P H + + KL
Sbjct: 11 LGVSIHFIFNTLLTLDINKRVYN--HRPGECRKIEGPVHGSEDIEVIDKL 58
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 553 PPQHHRHSVHLP-HKLLPQHSVPVQ 624
PP+HH H H P H L H P Q
Sbjct: 1611 PPRHHHHQPHPPHHPHLQNHYHPPQ 1635
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 553 PPQHHRHSVHLP-HKLLPQHSVPVQ 624
PP+HH H H P H L H P Q
Sbjct: 1772 PPRHHHHQPHPPHHPHLQNHYHPPQ 1796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,666,574
Number of Sequences: 27780
Number of extensions: 239306
Number of successful extensions: 854
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -