Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_E07
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   5.0  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   8.8  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   8.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.8  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 372 WKFRPQAFTRIRTSPSPTVGSGFLSILTVLRPPKPVSTTAR 250
           + F+P A     T  + T  S  LS +T   P  PV TTAR
Sbjct: 798 YTFKPFASRLRATESTATESSSTLSTVTTTLP--PVVTTAR 836


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 602 QQHPGQTFLRAARTHTAPVQIPARP 528
           QQHP   F  AA  HT P   P  P
Sbjct: 70  QQHPPSVFPHAALPHT-PTNQPIVP 93


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 582 CLPWMLLPSP 611
           C+PWMLL  P
Sbjct: 652 CIPWMLLGKP 661


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 539 PARPKRGTREEPPLDRPP*N 480
           PARP  G    P + RPP N
Sbjct: 178 PARPNPGMPPGPQMMRPPGN 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,257
Number of Sequences: 2352
Number of extensions: 13610
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)