Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_D22
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4CE0 Cluster: PREDICTED: similar to Srb7p: RNA... 177 2e-43
UniRef50_Q9W5P1 Cluster: Mediator of RNA polymerase II transcrip... 151 1e-35
UniRef50_Q13503 Cluster: Mediator of RNA polymerase II transcrip... 121 2e-26
UniRef50_Q5DD16 Cluster: SJCHGC09264 protein; n=2; Schistosoma j... 73 6e-12
UniRef50_Q4TAU8 Cluster: Chromosome undetermined SCAF7253, whole... 59 8e-08
UniRef50_Q6BER6 Cluster: Mediator of RNA polymerase II transcrip... 51 2e-05
UniRef50_Q6SK87 Cluster: Peptidase; n=2; Arthrobacter aurescens|... 36 0.64
UniRef50_A5D149 Cluster: UDP-N-acetylmuramoyl-tripeptide--D-alan... 35 1.9
UniRef50_Q7QDG5 Cluster: ENSANGP00000013596; n=1; Anopheles gamb... 34 2.6
UniRef50_O95613 Cluster: Pericentrin; n=8; Amniota|Rep: Pericent... 34 3.4
UniRef50_A3CP76 Cluster: Putative uncharacterized protein; n=2; ... 33 4.5
UniRef50_A3LQS9 Cluster: Predicted protein; n=1; Pichia stipitis... 33 5.9
UniRef50_Q86LT7 Cluster: Winged helix/forkhead transcription fac... 33 7.8
>UniRef50_UPI00015B4CE0 Cluster: PREDICTED: similar to Srb7p: RNA
polymerase II holoenzyme component, putative; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to Srb7p:
RNA polymerase II holoenzyme component, putative -
Nasonia vitripennis
Length = 183
Score = 177 bits (431), Expect = 2e-43
Identities = 91/136 (66%), Positives = 99/136 (72%)
Frame = +2
Query: 113 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 292
MADRLTQLQDTINQQAE FCNS+GILQQ+S PSKFPGF+R EDYA LFA
Sbjct: 1 MADRLTQLQDTINQQAEYFCNSVGILQQYSTPSKFPGFDRISTPQQPNQSQ-EDYAALFA 59
Query: 293 ALISRCAKDIDTXXXXXXXXXXXXXXQVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQ 472
LI+RCAKDIDT QV SL RLE EN+EAAEQLE+VVRQGE LL++IQ
Sbjct: 60 TLIARCAKDIDTLIDSLPSEESSQELQVASLSRLEQENQEAAEQLEDVVRQGEALLQRIQ 119
Query: 473 GALSDIAQCQLDMQNP 520
AL DIAQ QLDMQNP
Sbjct: 120 AALQDIAQSQLDMQNP 135
>UniRef50_Q9W5P1 Cluster: Mediator of RNA polymerase II
transcription subunit 21; n=7; Coelomata|Rep: Mediator
of RNA polymerase II transcription subunit 21 -
Drosophila melanogaster (Fruit fly)
Length = 142
Score = 151 bits (366), Expect = 1e-35
Identities = 79/134 (58%), Positives = 92/134 (68%)
Frame = +2
Query: 113 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 292
MADRLTQLQDT+NQQAE+FCN+IG++QQ SLPSKF FER EDYA LFA
Sbjct: 1 MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTPIPCPPQEDYAQLFA 60
Query: 293 ALISRCAKDIDTXXXXXXXXXXXXXXQVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQ 472
LI+RCAKDIDT Q SL+RLE EN+ A LEEVV++GE+LLEK+Q
Sbjct: 61 QLIARCAKDIDTLIESLPNEDSSIELQNSSLKRLEIENQGTARDLEEVVQKGELLLEKMQ 120
Query: 473 GALSDIAQCQLDMQ 514
+L IAQ QLDMQ
Sbjct: 121 YSLECIAQAQLDMQ 134
>UniRef50_Q13503 Cluster: Mediator of RNA polymerase II
transcription subunit 21; n=15; Eumetazoa|Rep: Mediator
of RNA polymerase II transcription subunit 21 - Homo
sapiens (Human)
Length = 144
Score = 121 bits (291), Expect = 2e-26
Identities = 66/131 (50%), Positives = 80/131 (61%)
Frame = +2
Query: 113 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 292
MADRLTQLQD +N A+ FCN+IG+LQQ P+ F + E+YA LFA
Sbjct: 1 MADRLTQLQDAVNSLADQFCNAIGVLQQCGPPASFNNIQ-TAINKDQPANPTEEYAQLFA 59
Query: 293 ALISRCAKDIDTXXXXXXXXXXXXXXQVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQ 472
ALI+R AKDID Q SL +LE EN EAA LE+VV +G++LLEKIQ
Sbjct: 60 ALIARTAKDIDVLIDSLPSEESTAALQAASLYKLEEENHEAATCLEDVVYRGDMLLEKIQ 119
Query: 473 GALSDIAQCQL 505
AL+DIAQ QL
Sbjct: 120 SALADIAQSQL 130
>UniRef50_Q5DD16 Cluster: SJCHGC09264 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC09264 protein - Schistosoma
japonicum (Blood fluke)
Length = 153
Score = 72.9 bits (171), Expect = 6e-12
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Frame = +2
Query: 113 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFE------RXXXXXXXXXXXXED 274
MADRLT+LQD IN QAEN CN+IG++QQ + PS F F + +D
Sbjct: 1 MADRLTELQDAINLQAENLCNAIGVIQQVAQPSFFSDFNWASRSVKPEYQAFIQSQPTDD 60
Query: 275 YAVLFAALISRCAKDIDTXXXXXXXXXXXXXXQVQSLRRLEAENKEAAEQLEEVVRQGEI 454
A FA IS AK +DT Q ++ +L + +L + + E
Sbjct: 61 IARSFAVAISATAKQLDTLIGALPEEEASADIQRATVHKLLEGYRAEGAKLARITTKLES 120
Query: 455 LLEKIQGALSDIAQCQLDMQN 517
L +++ L+ IAQ QL Q+
Sbjct: 121 RLAEVRRCLTAIAQTQLTTQS 141
>UniRef50_Q4TAU8 Cluster: Chromosome undetermined SCAF7253, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF7253, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 65
Score = 59.3 bits (137), Expect = 8e-08
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 371 QVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQNPA 523
Q SLR+LE EN EAA +LEEVV +G++LLEKIQ AL IAQ QL +N A
Sbjct: 11 QAASLRQLEDENHEAAARLEEVVYRGDMLLEKIQSALGIIAQSQLRTRNGA 61
>UniRef50_Q6BER6 Cluster: Mediator of RNA polymerase II
transcription subunit 21; n=2; Caenorhabditis|Rep:
Mediator of RNA polymerase II transcription subunit 21 -
Caenorhabditis elegans
Length = 130
Score = 51.2 bits (117), Expect = 2e-05
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Frame = +2
Query: 113 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 292
MADR+TQLQD IN+ A N+IG+LQ + P +F + E +FA
Sbjct: 1 MADRMTQLQDMINEMAGLMTNAIGVLQATAPPCEFGAISQ--------ELEDEPNCAIFA 52
Query: 293 ALISRCAKDIDTXXXXXXXXXXXXXXQV-QSLRRLEAENKEAAEQLEEVVRQGEILLEKI 469
A I++ AK+I+ +V + + + + + +E +L +V L+ +
Sbjct: 53 AGIAKAAKNIEILIDSFPIEAGNQEAEVEEKMIKNDEKQREKVNELVGLVGDSNRLVGVV 112
Query: 470 QGALSDIAQCQL 505
Q L++I++ Q+
Sbjct: 113 QKKLAEISKTQM 124
>UniRef50_Q6SK87 Cluster: Peptidase; n=2; Arthrobacter
aurescens|Rep: Peptidase - Arthrobacter aurescens
Length = 274
Score = 36.3 bits (80), Expect = 0.64
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 505 GHAESGSDPQQGCETTVIGMGSGVLPTVVSSTKGY 609
G +G+D GCET V+ GSGV+ SS GY
Sbjct: 173 GDFHNGTDLSSGCETPVMAAGSGVVSEASSSASGY 207
>UniRef50_A5D149 Cluster:
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase; n=2; Peptococcaceae|Rep:
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase - Pelotomaculum thermopropionicum SI
Length = 469
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +2
Query: 398 AENKEAAEQLEEVVRQGEILLEK-IQG-ALSDIAQCQLDMQNPALI 529
A+N +AA LEE++R G+++L K +G + +I +C L + PAL+
Sbjct: 418 ADNMQAAGILEELIRDGDVVLVKGSRGMKMEEIVRCLLKSREPALL 463
>UniRef50_Q7QDG5 Cluster: ENSANGP00000013596; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000013596 - Anopheles gambiae
str. PEST
Length = 176
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 377 QSLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDI-AQC 499
+ L ++ EN+E E +EE+ RQ E++LE + + D+ AQC
Sbjct: 25 EKLGQVSGENRELNENIEELDRQHEVVLENLVASKRDLQAQC 66
>UniRef50_O95613 Cluster: Pericentrin; n=8; Amniota|Rep: Pericentrin
- Homo sapiens (Human)
Length = 3336
Score = 33.9 bits (74), Expect = 3.4
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -1
Query: 311 HNEKLEP-RIKPHNPLDSAVVEESENHRVRSLGT--C*ATRTAVEFRCCYKNSQLVGLWY 141
H ++LEP R K P A +EES H++ +L + C V RCC + S L W
Sbjct: 577 HVDELEPERHKESLPRFQAELEESHRHQLEALESPLCIQHEGHVSDRCCVETSALGHEWR 636
Query: 140 LE 135
LE
Sbjct: 637 LE 638
>UniRef50_A3CP76 Cluster: Putative uncharacterized protein; n=2;
Streptococcus|Rep: Putative uncharacterized protein -
Streptococcus sanguinis (strain SK36)
Length = 273
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = -1
Query: 185 FRCCYKNSQLVGLWYLEAELSDQPLFNSDIYPTNHC*NLILIWIFS 48
F YK +L GLW + + +++ ++NS + T H N+++ ++F+
Sbjct: 205 FSTAYKKYRLFGLWCVVSTVANHFIWNSPFFETEHRINIVVGFLFA 250
>UniRef50_A3LQS9 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 484
Score = 33.1 bits (72), Expect = 5.9
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 371 QVQSLRRLEAENKEAAEQLEE-VVRQGEILLEKIQ 472
Q ++LR+ EAE K+A +QLEE VR+ E +E IQ
Sbjct: 262 QDRALRQAEAEKKKAQQQLEESKVREKEAAIENIQ 296
>UniRef50_Q86LT7 Cluster: Winged helix/forkhead transcription factor
AmphiFoxQ2; n=1; Branchiostoma floridae|Rep: Winged
helix/forkhead transcription factor AmphiFoxQ2 -
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Length = 271
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 490 CSVPVGHAESGSDPQQGCETTVIGMGSGVLPTVVSSTK 603
CS PV +ESGS+ + + IG+ LPT TK
Sbjct: 34 CSPPVSGSESGSEDDRAGSISPIGVSPNPLPTTTDETK 71
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,967,623
Number of Sequences: 1657284
Number of extensions: 9398288
Number of successful extensions: 24761
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24722
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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