Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_D22
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81475-5|CAH04698.1| 130|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 29 3.8
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 29 3.8
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 29 3.8
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 6.6
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81475-5|CAH04698.1| 130|Caenorhabditis elegans Hypothetical
protein C24H11.9 protein.
Length = 130
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Frame = +2
Query: 113 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 292
MADR+TQLQD IN+ A N+IG+LQ + P +F + E +FA
Sbjct: 1 MADRMTQLQDMINEMAGLMTNAIGVLQATAPPCEFGAISQ--------ELEDEPNCAIFA 52
Query: 293 ALISRCAKDIDTXXXXXXXXXXXXXXQV-QSLRRLEAENKEAAEQLEEVVRQGEILLEKI 469
A I++ AK+I+ +V + + + + + +E +L +V L+ +
Sbjct: 53 AGIAKAAKNIEILIDSFPIEAGNQEAEVEEKMIKNDEKQREKVNELVGLVGDSNRLVGVV 112
Query: 470 QGALSDIAQCQL 505
Q L++I++ Q+
Sbjct: 113 QKKLAEISKTQM 124
>U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical
protein B0432.6 protein.
Length = 329
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 377 QSLRRLE---AENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQNPAL 526
QS+ R+E AEN+E ++ EE V + E+L E I+ ++ Q DM+ L
Sbjct: 200 QSVTRIELFLAENRELKQEFEEKVVECEVLKEHIRQIDLELKNKQSDMERALL 252
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 371 QVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQN 517
Q ++LRR+E + E + LEE RQGE + + + I Q + +++
Sbjct: 1847 QGRTLRRMETKMAEMQQMLEEEKRQGESNRQAVDRQNARIRQLRTQLED 1895
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 386 RRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDM 511
RRLEA+ + +QL+E E+ EK++ + + Q D+
Sbjct: 1739 RRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQLEQMTADL 1780
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 371 QVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQN 517
Q ++LRR+E + E + LEE RQGE + + + I Q + +++
Sbjct: 1847 QGRTLRRMETKMAEMQQMLEEEKRQGESNRQAVDRQNARIRQLRTQLED 1895
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 386 RRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDM 511
RRLEA+ + +QL+E E+ EK++ + + Q D+
Sbjct: 1739 RRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQLEQMTADL 1780
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 371 QVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQN 517
Q ++LRR+E + E + LEE RQGE + + + I Q + +++
Sbjct: 1847 QGRTLRRMETKMAEMQQMLEEEKRQGESNRQAVDRQNARIRQLRTQLED 1895
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 386 RRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDM 511
RRLEA+ + +QL+E E+ EK++ + + Q D+
Sbjct: 1739 RRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQLEQMTADL 1780
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 371 QVQSLRRLEAENKEAAEQLEEVVRQGE 451
+V+ R+ EAE+KE EQL VR+ E
Sbjct: 921 EVEEQRKREAEDKEKIEQLNAKVREKE 947
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 380 SLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLD 508
++ L E ++ EQL+E+VR+ E +L Q +D +CQL+
Sbjct: 302 NMESLNIEKEKIHEQLQEIVREREKVLIDNQNLSTD--KCQLN 342
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 371 QVQSLRRLEAENKEAAEQLEEVVRQGEILLEKI 469
+++ L+R EA K QLE+ V+ ++ +EKI
Sbjct: 216 EIEDLKRSEAYAKSQISQLEDTVKSLKLHIEKI 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,575,201
Number of Sequences: 27780
Number of extensions: 224909
Number of successful extensions: 664
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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