Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_D10
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    30   0.017
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   3.4  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   3.4  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   5.9  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   5.9  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   7.8  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = +2

Query: 44  ELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKL--DGFPLLKRLKCILLNNNRIVRIG 217
           ELDL G ++  + +    L    T+D  +N I       F  L +L  + L  N I  + 
Sbjct: 435 ELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDIGNLS 494

Query: 218 ENLEHYIPNLESVILTNNNISEL 286
             +   +PNL+ + L  N +  +
Sbjct: 495 RGMLWDLPNLQILNLARNKVQHV 517



 Score = 26.2 bits (55), Expect = 0.27
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +2

Query: 47  LDLRGYKIPQIENLGATLD-QFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGEN 223
           LD+ G  I  + N     D +  T+D S N I +L    +   ++ + +NNN I  +  N
Sbjct: 576 LDIHGNFIESLGNYYKIRDSKVKTLDASHNRITELSPLSVPDSVELLFINNNYINLVRPN 635

Query: 224 LEHYIPNLESVILTNNNISEL 286
                 NL  V +  N I  +
Sbjct: 636 TFTDKVNLTRVDMYANMIETM 656



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +2

Query: 149 DGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDL 295
           D F  L+ L  + +  + +  +  N    + NL+++ LT N + ++ D+
Sbjct: 141 DSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDINDI 189


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 224 LEHYIPNLESVILT 265
           LE YIP +ESV+ T
Sbjct: 101 LEEYIPRVESVVET 114


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 224 LEHYIPNLESVILT 265
           LE YIP +ESV+ T
Sbjct: 75  LEEYIPRVESVVET 88


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 79  DLWNLITSKIQFSGPYKDSYI 17
           ++W L+ +K   +G YK  Y+
Sbjct: 99  EIWVLLEAKYDPTGAYKQHYL 119


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 79  DLWNLITSKIQFSGPYKDSYI 17
           ++W L+ +K   +G YK  Y+
Sbjct: 99  EIWVLLEAKYDPTGAYKQHYL 119


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 376 ICGIQNARAKIIGL 417
           +CG+QN RA+ + +
Sbjct: 14  MCGVQNLRARSVNI 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,534
Number of Sequences: 438
Number of extensions: 3610
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)