Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_D08
         (619 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73...    33   0.14 
02_02_0046 + 6340556-6340589,6343022-6343131,6343208-6343307,634...    29   3.9  
05_07_0131 + 27898028-27898042,27898159-27898274,27898361-278984...    28   6.8  
02_01_0046 - 311752-312138,312220-312372,312458-312653,312702-31...    27   9.0  

>11_01_0101 -
           738305-738556,738723-738977,739306-739554,739649-739843,
           739953-740060,740184-740405,740806-741390,741495-741863,
           742423-742529,742755-742883,743027-743084,743166-743248,
           744115-744196,744274-744350,744477-744560,744649-744718,
           744796-744884,744965-745654,746127-746439
          Length = 1338

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +2

Query: 329 KYQISWTEEPA-KARSGVHQINILDEEGWASLRRARRADPAASVAPLLAIQLSHPGSYS 502
           KY+I +    A K +SG+  IN L +  + S+RR RR    A +AP L   ++ P  ++
Sbjct: 590 KYRIRFCLVLAEKEKSGIPNINWLRDRLFRSIRRRRRRGALAPLAPTLTTAIAMPSCFT 648


>02_02_0046 +
           6340556-6340589,6343022-6343131,6343208-6343307,
           6343392-6343477,6343846-6344124,6346337-6346435,
           6346803-6346826
          Length = 243

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = -1

Query: 550 QD*DECCQYLGVHPWPGVAARMTKLYGE*WSNRGGRIGTSSTTQRSPAFFI*NVYLVHSG 371
           +D  +CC + G H   G    +T       S    + G +  TQR   FF  N   +  G
Sbjct: 174 RDDHDCCSHSGAHALQGSECELTTWSATKQSIFEDKPGKNCCTQRGAEFFYTNSQ-IGQG 232

Query: 370 ASLRW 356
           A   W
Sbjct: 233 AEAEW 237


>05_07_0131 +
           27898028-27898042,27898159-27898274,27898361-27898424,
           27899450-27899791
          Length = 178

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 117 CDNINKTFCDHFVICDLKGKSNFKNLRLQFSLLYSR 10
           C  I KT   HF +C       F N  ++F L+Y +
Sbjct: 122 CIQIIKTATVHFKLCKRDNTKQFHNSNIKFPLVYRK 157


>02_01_0046 -
           311752-312138,312220-312372,312458-312653,312702-312792,
           312808-313228
          Length = 415

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 228 PNLRLNVTILCPRTT----VCTLKS-MENH*RPPESVKTNI 335
           PNL LN   LCPRT+     C + S + NH    + +K N+
Sbjct: 24  PNLSLNFKTLCPRTSRGNFKCKIDSILRNHLGTAKILKLNV 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,421,069
Number of Sequences: 37544
Number of extensions: 270010
Number of successful extensions: 680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)