Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_D06
         (568 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0572 + 11667455-11670783,11672026-11672419                       30   1.5  
06_02_0263 - 13566621-13569875                                         29   2.0  
09_06_0038 - 20415363-20415883,20415917-20416596,20416858-204169...    28   6.0  
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467...    28   6.0  
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384...    28   6.0  
05_04_0174 - 18728199-18731411                                         27   7.9  
04_03_0902 + 20707834-20708187                                         27   7.9  
03_03_0188 + 15269347-15270213                                         27   7.9  
01_01_0077 - 585670-585787,585921-586687                               27   7.9  

>02_02_0572 + 11667455-11670783,11672026-11672419
          Length = 1240

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +1

Query: 130 LVTLPADHVSALHYAGRCGRTGPSRVRR 213
           LV  P    SA   AGR GRTGP +  R
Sbjct: 896 LVITPISQASAKQRAGRAGRTGPGKCYR 923


>06_02_0263 - 13566621-13569875
          Length = 1084

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 130 LVTLPADHVSALHYAGRCGRTGPSRVRR 213
           L+  P    SA   AGR GRTGP +  R
Sbjct: 740 LIITPISQASAKQRAGRAGRTGPGKCYR 767


>09_06_0038 -
           20415363-20415883,20415917-20416596,20416858-20416911,
           20417440-20417489,20417665-20417800,20419030-20419128,
           20419411-20419676
          Length = 601

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
 Frame = -3

Query: 539 SPSTDQEVAGPALS------LQASRICLEFIPM 459
           SP +D++VAGPA+       L+A+R+C++ + M
Sbjct: 84  SPHSDRKVAGPAIQTEDTGFLRANRLCVQSVDM 116


>06_01_0645 +
           4670966-4671021,4671128-4671177,4671270-4671350,
           4671862-4672078,4673220-4673607,4673830-4674033,
           4675174-4675334,4675401-4675586,4675732-4675963,
           4676530-4676732,4677074-4677208,4677367-4677550
          Length = 698

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 130 LVTLPADHVSALHYAGRCGRTGPSRVRR 213
           L+ +P     AL  +GR GR GP +  R
Sbjct: 372 LIIIPVSKAQALQRSGRAGREGPGKCYR 399


>03_02_0740 -
           10836752-10837052,10837756-10837814,10837901-10838476,
           10839965-10841686,10841776-10842173,10842264-10842318,
           10842989-10843048,10843444-10843540,10844885-10844955,
           10845029-10845109,10846054-10846124,10847951-10848119,
           10848521-10848683,10848752-10848942,10849037-10849168
          Length = 1381

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 555 GGPHPVSEYRPRGRGTSIIFASLENLFGVHTDVECNGFKW 436
           GGP     Y+P  RG ++I  SL+N F +   ++C    W
Sbjct: 188 GGPR--QRYQPTPRGVNMIVWSLDNRFVLAAIMDCRICVW 225


>05_04_0174 - 18728199-18731411
          Length = 1070

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +1

Query: 130 LVTLPADHVSALHYAGRCGRTGPSRVRR 213
           L+  P    SA   AGR GRTGP    R
Sbjct: 717 LLVAPVSRASAEQRAGRSGRTGPGECFR 744


>04_03_0902 + 20707834-20708187
          Length = 117

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 91  NNIRSHTSRPTLXTRPVPMQFTSPHPAPKP 2
           ++ +++T R  L   P P+  TSP P P P
Sbjct: 54  SHTKTNTPRTPLYAPPPPLPHTSPTPEPTP 83


>03_03_0188 + 15269347-15270213
          Length = 288

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 64  PTLXTRPVPMQFTSPHPAPKP 2
           P    RP P+++T  HP P P
Sbjct: 149 PPFLLRPSPLKYTHSHPTPPP 169


>01_01_0077 - 585670-585787,585921-586687
          Length = 294

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 76 HTSRPTLXTRPVPMQFTSPHPAP 8
          HTS PTL T P P     P P P
Sbjct: 7  HTSNPTLPTPPQPHNHHPPVPPP 29


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,025,059
Number of Sequences: 37544
Number of extensions: 250725
Number of successful extensions: 830
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)