Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_D05
(503 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 105 9e-23
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 105 9e-23
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 105 9e-23
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 105 9e-23
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 94 3e-19
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 31 3.0
AL606804-1|CAI17145.1| 317|Homo sapiens olfactory receptor, fam... 30 5.3
AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1). pr... 29 9.2
AE006464-22|AAK61254.1| 1053|Homo sapiens Similar to pre-pro-meg... 29 9.2
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 105 bits (252), Expect = 9e-23
Identities = 52/85 (61%), Positives = 56/85 (65%)
Frame = +2
Query: 80 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 259
G +PY ++ G P R RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 260 TRIIDVVYNASNNELVRTKTLGQEC 334
TRIIDVVYNASNNELVRTKTL + C
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVKNC 100
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +3
Query: 315 RPLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTAXKYLARQ 494
+ LVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K KY R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 495 RLA 503
+ A
Sbjct: 154 KNA 156
Score = 86.6 bits (205), Expect = 4e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 34 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 168
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 105 bits (252), Expect = 9e-23
Identities = 52/85 (61%), Positives = 56/85 (65%)
Frame = +2
Query: 80 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 259
G +PY ++ G P R RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 260 TRIIDVVYNASNNELVRTKTLGQEC 334
TRIIDVVYNASNNELVRTKTL + C
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVKNC 100
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +3
Query: 315 RPLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTAXKYLARQ 494
+ LVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K KY R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 495 RLA 503
+ A
Sbjct: 154 KNA 156
Score = 86.6 bits (205), Expect = 4e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 34 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 168
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 105 bits (252), Expect = 9e-23
Identities = 52/85 (61%), Positives = 56/85 (65%)
Frame = +2
Query: 80 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 259
G +PY ++ G P R RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 260 TRIIDVVYNASNNELVRTKTLGQEC 334
TRIIDVVYNASNNELVRTKTL + C
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVKNC 100
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +3
Query: 315 RPLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTAXKYLARQ 494
+ LVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K KY R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 495 RLA 503
+ A
Sbjct: 154 KNA 156
Score = 86.6 bits (205), Expect = 4e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 34 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 168
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 105 bits (252), Expect = 9e-23
Identities = 52/85 (61%), Positives = 56/85 (65%)
Frame = +2
Query: 80 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 259
G +PY ++ G P R RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 260 TRIIDVVYNASNNELVRTKTLGQEC 334
TRIIDVVYNASNNELVRTKTL + C
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVKNC 100
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +3
Query: 315 RPLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTAXKYLARQ 494
+ LVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K KY R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 495 RLA 503
+ A
Sbjct: 154 KNA 156
Score = 86.6 bits (205), Expect = 4e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 34 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 168
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 93.9 bits (223), Expect = 3e-19
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +3
Query: 315 RPLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTAXKYLARQ 494
+ LVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K KY R+
Sbjct: 74 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 133
Query: 495 RLA 503
+ A
Sbjct: 134 KNA 136
Score = 86.6 bits (205), Expect = 4e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 34 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 168
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 56.0 bits (129), Expect = 7e-08
Identities = 32/49 (65%), Positives = 34/49 (69%)
Frame = +2
Query: 188 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLGQEC 334
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTL + C
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNC 80
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 420 LTEAEEAIINKKRSQKTAXKYLARQRLA 503
LT EE I+NKKRS+K KY R++ A
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNA 28
>AL606804-1|CAI17145.1| 317|Homo sapiens olfactory receptor, family
2, subfamily B, memberd protein 1 protein.
Length = 317
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 339 QLHS*PRVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVF 187
QLHS +F+ S LD YTT+ + + V Q+ + + +Y VF
Sbjct: 58 QLHSPMYIFLSHLSFLDLCYTTTTVPQMLVNMGSSQKTISYGGCTVQYAVF 108
>AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1).
protein.
Length = 178
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 330 NAIVVVDATPFRQWYESHYTLPLGRKKGAKLT 425
N I+ V TPF W + H++ P G LT
Sbjct: 5 NPIIAVFRTPFAPWLQFHWSAPFSAWLGTVLT 36
>AE006464-22|AAK61254.1| 1053|Homo sapiens Similar to
pre-pro-megakarycyte potentiating factor precursor
protein.
Length = 1053
Score = 29.1 bits (62), Expect = 9.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 106 SSCVWAHVSHRWPFAYAS 53
+SC WA HRWP + S
Sbjct: 221 TSCAWAQAVHRWPVLWGS 238
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,500,081
Number of Sequences: 237096
Number of extensions: 1761965
Number of successful extensions: 3934
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3934
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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