Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_C24
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/54 (22%), Positives = 25/54 (46%)
 Frame = +1

Query: 322  NEKSHKDLSIMPQIVRDMFQNGIAYDEPDRMPDKINIRNLDIIMYVVAILGHFV 483
            NE   + +S +PQ  RD   N    ++PD    ++   +   I++   +L  ++
Sbjct: 1191 NETDSETVSTVPQNKRDDLVNPYWIEDPDVRKGEVEFLSSTEILFWKDLLDKYL 1244


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/54 (22%), Positives = 25/54 (46%)
 Frame = +1

Query: 322  NEKSHKDLSIMPQIVRDMFQNGIAYDEPDRMPDKINIRNLDIIMYVVAILGHFV 483
            NE   + +S +PQ  RD   N    ++PD    ++   +   I++   +L  ++
Sbjct: 1191 NETDSETVSTVPQNKRDDLVNPYWIEDPDVRKGEVEFLSSTEILFWKDLLDKYL 1244


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/54 (22%), Positives = 25/54 (46%)
 Frame = +1

Query: 322  NEKSHKDLSIMPQIVRDMFQNGIAYDEPDRMPDKINIRNLDIIMYVVAILGHFV 483
            NE   + +S +PQ  RD   N    ++PD    ++   +   I++   +L  ++
Sbjct: 1191 NETDSETVSTVPQNKRDDLVNPYWIEDPDVRKGEVEFLSSTEILFWKDLLDKYL 1244


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/54 (22%), Positives = 25/54 (46%)
 Frame = +1

Query: 322  NEKSHKDLSIMPQIVRDMFQNGIAYDEPDRMPDKINIRNLDIIMYVVAILGHFV 483
            NE   + +S +PQ  RD   N    ++PD    ++   +   I++   +L  ++
Sbjct: 1191 NETDSETVSTVPQNKRDDLVNPYWIEDPDVRKGEVEFLSSTEILFWKDLLDKYL 1244


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 436 NLDIIMYVVAILGHFVDLGLDINIAVRY 519
           +L  ++YVV +  HF+   L + I +RY
Sbjct: 172 HLFCVLYVVLL--HFLTYNLSLGIKLRY 197


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 436 NLDIIMYVVAILGHFVDLGLDINIAVRY 519
           +L  ++YVV +  HF+   L + I +RY
Sbjct: 172 HLFCVLYVVLL--HFLTYNLSLGIKLRY 197


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +2

Query: 257 HYLPTVL--LFVIGFIYHVLFISLMKNLT 337
           ++L  VL  L ++G I   +F  LMKN+T
Sbjct: 56  YFLRMVLIDLLIVGCILKHIFNILMKNVT 84


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +3

Query: 144 LNK-LQIKFVVDFKLIFQLWIQMSFYVLCNLYVFSNLSTTIYLLSCFL*LVLFIMFCL 314
           LN+  +++ +  F + F  +I   FY      + +      Y+ +  +   LF+ F L
Sbjct: 223 LNRYFEVQVLTIFGVSFYFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFLFFQL 280


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +3

Query: 144 LNK-LQIKFVVDFKLIFQLWIQMSFYVLCNLYVFSNLSTTIYLLSCFL*LVLFIMFCL 314
           LN+  +++ +  F + F  +I   FY      + +      Y+ +  +   LF+ F L
Sbjct: 219 LNRYFEVQVLTIFGVSFYFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFLFFQL 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,993
Number of Sequences: 336
Number of extensions: 3086
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)