Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_C24
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989     30   1.4  
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221...    30   1.4  
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931     29   2.4  
07_01_0117 + 894314-896677                                             28   5.6  
11_06_0495 - 24319531-24320831,24320923-24321109,24322919-243230...    27   9.8  
09_02_0180 - 5417864-5418397                                           27   9.8  
08_01_0913 + 8995491-8995926,8995976-8997352,8997431-8998174,899...    27   9.8  

>11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989
          Length = 476

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 463 AILGHFVDLGLDINIAVRYSLAGMVTEFGWTLAF---ILIPAFVNTAV 597
           ++L  FV++G+ ++    Y+LAG+    GW + +   +L P F+   V
Sbjct: 157 SLLDMFVNVGILLSYVSNYALAGLPVHVGWRVMYGIGVLPPVFLAAGV 204


>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
            17722189-17722332,17722415-17722722,17723433-17723568,
            17723748-17723841,17723976-17724073,17724951-17725004,
            17725704-17726150,17726227-17726393,17726540-17726663,
            17726751-17726837,17727000-17727056,17727492-17727560,
            17727664-17727811,17727893-17728116,17728842-17728958,
            17729649-17729742,17730573-17730640,17733278-17733334,
            17733412-17733511,17733638-17733674,17734077-17734200,
            17735254-17735322,17735371-17735410,17735905-17735993,
            17736849-17736953,17737033-17737104,17737814-17737936,
            17738049-17738117,17738966-17739059,17739145-17739231,
            17740184-17740351,17740436-17740552,17741484-17741590,
            17741671-17741803,17742564-17742667,17743504-17743629,
            17744148-17744216,17744996-17745064,17745278-17745358,
            17745444-17745533,17745896-17746000,17747803-17747873,
            17748320-17748461,17749266-17749330,17750081-17750168,
            17750236-17750325,17750437-17750673,17751064-17751170,
            17751625-17751832,17752376-17752546
          Length = 2366

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = +1

Query: 235  MYSLICRPLFT----YCLAFCDWFYLSCFVYKF 321
            ++ LICRPL      +  +F DW  L C+ Y+F
Sbjct: 1443 LFLLICRPLNDIEDLFYPSFADWVVLKCYTYQF 1475


>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
          Length = 478

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 457 VVAILGHFVDLGLDINIAVRYSLAGMVTEFGWTLAFIL---IPAFVNTAV 597
           + ++L  F+++G+ ++    Y+ AG+    GW + F +    P F+  AV
Sbjct: 157 LTSLLDMFINVGILLSYVSNYAFAGLPVHLGWRVMFAIGAVPPVFLAAAV 206


>07_01_0117 + 894314-896677
          Length = 787

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
 Frame = +1

Query: 196 CGYK*V---SMCCVICM--YSLICRPLFTYCLAFCDWFY 297
           C YK V    + CV CM  +  IC P +  C   C+W +
Sbjct: 469 CCYKPVFHFMLYCVRCMMRWPTICCPCYVVCSPLCNWVF 507


>11_06_0495 -
           24319531-24320831,24320923-24321109,24322919-24323062,
           24324467-24324469
          Length = 544

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +1

Query: 478 FVDLGLDINIAVRYSLAGMVTEFGWTLAF---ILIPAFVNTAV 597
           F++ G+ ++    Y+LAG+    GW + F   ++ P F+   V
Sbjct: 229 FINAGILLSYVSNYALAGLPLRLGWRVMFAAGVVPPVFLAAGV 271


>09_02_0180 - 5417864-5418397
          Length = 177

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 486 VDKMTQNSYNIHNNVQIPNVNLIGHSIRLVISYAVLKHVS 367
           +D+M ++ YN  N + +PNV   G  +  V+ Y   KH S
Sbjct: 42  LDEMKKDDYNAINGIPLPNV--AGDVLAKVVEYCT-KHAS 78


>08_01_0913 +
           8995491-8995926,8995976-8997352,8997431-8998174,
           8998402-8998748
          Length = 967

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 193 WKINLKSTTNLICNLFNFTI 134
           WK+N  ++ NL CNLF  T+
Sbjct: 377 WKLNKLTSLNLSCNLFTGTL 396


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,463,186
Number of Sequences: 37544
Number of extensions: 264945
Number of successful extensions: 560
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)