Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_C24
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death ab...    40   0.001
Z68222-2|CAA92498.1|  105|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p...    29   2.2  
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z46381-9|CAI58660.1|  807|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z46381-8|CAA86517.2|  808|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF038623-2|AAB94158.1|  342|Caenorhabditis elegans Seven tm rece...    28   6.6  
AF025461-1|AAB70996.2|  297|Caenorhabditis elegans Hypothetical ...    28   6.6  

>AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death
           abnormality protein 8 protein.
          Length = 458

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 24/92 (26%), Positives = 42/92 (45%)
 Frame = +1

Query: 328 KSHKDLSIMPQIVRDMFQNGIAYDEPDRMPDKINIRNLDIIMYVVAILGHFVDLGLDINI 507
           K HK   ++     +    GI     DR+P  + +R  D+  +  A+  + +D   DI I
Sbjct: 4   KKHKSKLLLVPRDEEQEDAGIVAVLTDRIPSVLLVRWFDLFCFGFAMCSYALDFFSDIGI 63

Query: 508 AVRYSLAGMVTEFGWTLAFILIPAFVNTAVSI 603
           A+ +  AG        LAF L+P+ +   +S+
Sbjct: 64  AIFHFWAGRYLSGSLVLAFALLPSVIINIISM 95


>Z68222-2|CAA92498.1|  105|Caenorhabditis elegans Hypothetical
           protein ZK1251.2 protein.
          Length = 105

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 313 YKFNEKSHKDLSIMPQIVRDMFQNGIAYDEPDRMPDKINIRNLD--IIMYVVAILGHFVD 486
           Y F+ +S  D  I  +++  M +N I      R+PD+  I      I  YV A+ G   +
Sbjct: 19  YPFSLESLNDQIINEEVIEYMLENSIRSSRTRRVPDEKKIYRCGRRIHSYVFAVCGKACE 78

Query: 487 LGLDINIA 510
              ++NIA
Sbjct: 79  SNTEVNIA 86


>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical protein
            B0024.8 protein.
          Length = 1185

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/65 (21%), Positives = 33/65 (50%)
 Frame = -1

Query: 546  ELCHHSSQRISNSNIYIES*VDKMTQNSYNIHNNVQIPNVNLIGHSIRLVISYAVLKHVS 367
            E+C H+S+ +++    IE+ + ++   +  + +      ++ +G   +L  + + LK V 
Sbjct: 988  EMCGHASKAVASDTRLIEAFISRLGDTNGKVASCAMETYISTMGSMAKLYSTESNLKAVM 1047

Query: 366  NDLRH 352
            N L H
Sbjct: 1048 NQLAH 1052


>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
           protein F36H1.2c protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 159 IKFVVDFKLIFQLWIQMSFYVLC--NLYVFSNLSTTIYLLSCFL*LVLFIMFC 311
           +   V F L F +++    + L    L   SN S T YL+S  + L++FI+FC
Sbjct: 482 VSLSVSFALFFAIFLFFGMFSLTFTMLIAISN-SVTAYLISWSVFLLIFIIFC 533


>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
           protein F36H1.2b protein.
          Length = 1379

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 159 IKFVVDFKLIFQLWIQMSFYVLC--NLYVFSNLSTTIYLLSCFL*LVLFIMFC 311
           +   V F L F +++    + L    L   SN S T YL+S  + L++FI+FC
Sbjct: 482 VSLSVSFALFFAIFLFFGMFSLTFTMLIAISN-SVTAYLISWSVFLLIFIIFC 533


>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
           protein F36H1.2a protein.
          Length = 1398

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 159 IKFVVDFKLIFQLWIQMSFYVLC--NLYVFSNLSTTIYLLSCFL*LVLFIMFC 311
           +   V F L F +++    + L    L   SN S T YL+S  + L++FI+FC
Sbjct: 482 VSLSVSFALFFAIFLFFGMFSLTFTMLIAISN-SVTAYLISWSVFLLIFIIFC 533


>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
           protein C05C10.2b protein.
          Length = 1553

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = -2

Query: 650 SSFVSESCCLSWAYSRIETAVFTKAGIRIKARVQPNSVTIPANEYLTAIFI 498
           S++ S+S  L  A S  ET+   KA   IKA  QP S+  P +EY   +F+
Sbjct: 146 SAWKSQSSALP-APSSSETSKIVKA--EIKAPQQPMSLVYPESEYSILVFV 193


>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
           protein C05C10.2a protein.
          Length = 1551

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = -2

Query: 650 SSFVSESCCLSWAYSRIETAVFTKAGIRIKARVQPNSVTIPANEYLTAIFI 498
           S++ S+S  L  A S  ET+   KA   IKA  QP S+  P +EY   +F+
Sbjct: 146 SAWKSQSSALP-APSSSETSKIVKA--EIKAPQQPMSLVYPESEYSILVFV 193


>Z46381-9|CAI58660.1|  807|Caenorhabditis elegans Hypothetical
           protein M01F1.4b protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 436 NLDIIMYVVAILGHFVDLGLDINIAVRYSLAGMVTEFGWTLAFILIPAFV 585
           NLD +M +   +G  + + + I  ++  SLAG++  FG  L    I   V
Sbjct: 552 NLDTLMGIAQSIGAILAVNVSIFSSLLVSLAGIILSFGMDLLNTFIEMIV 601


>Z46381-8|CAA86517.2|  808|Caenorhabditis elegans Hypothetical
           protein M01F1.4a protein.
          Length = 808

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 436 NLDIIMYVVAILGHFVDLGLDINIAVRYSLAGMVTEFGWTLAFILIPAFV 585
           NLD +M +   +G  + + + I  ++  SLAG++  FG  L    I   V
Sbjct: 553 NLDTLMGIAQSIGAILAVNVSIFSSLLVSLAGIILSFGMDLLNTFIEMIV 602


>AF038623-2|AAB94158.1|  342|Caenorhabditis elegans Seven tm
           receptor protein 166 protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 286 DWFYLSCFVYKFNEKSHKDLSIMPQIVRDMFQNGIAYDEPDRMP-DKINIRNLDIIMYVV 462
           +WF+LS F Y+ N+K+ + +         +  N   Y      P D+  + NLDI +++ 
Sbjct: 145 NWFHLSWFYYRRNDKTTEYIKEAVLENFGLHMNETVYSAALFYPADEHGVPNLDIKIFIS 204

Query: 463 AILGHF 480
            ++  F
Sbjct: 205 YVILSF 210


>AF025461-1|AAB70996.2|  297|Caenorhabditis elegans Hypothetical
           protein M01D1.3 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 313 YKFNEKSHKDLSIMPQIVRDMFQNGIAYD---EPDRMPDKI 426
           + FN K H+D +  PQI  D+ ++ ++YD   EP R  D +
Sbjct: 104 FSFNLKLHRDPAKPPQISNDL-KSQVSYDTMFEPSRKHDAV 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,496,659
Number of Sequences: 27780
Number of extensions: 275422
Number of successful extensions: 738
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)