Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_C23
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 214 1e-56
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 134 1e-32
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 120 1e-28
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 118 1e-27
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 110 2e-25
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 94 2e-20
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 87 2e-18
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 72 7e-14
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 50 2e-07
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 27 2.4
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 26 5.6
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 26 5.6
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 25 7.5
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 25 7.5
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 25 9.9
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 214 bits (522), Expect = 1e-56
Identities = 115/195 (58%), Positives = 138/195 (70%)
Frame = +3
Query: 72 VSLNPIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVE 251
+SLNP +I R+SSF+GAIA+GDLVKSTLGPKGMDKIL S +SG +
Sbjct: 1 MSLNPHQIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQS--NSSGDIV 58
Query: 252 VTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLH 431
VTNDGATILKSI +DN AAK+LV++SKVQD+EVGDGTTSV V ++ K+H
Sbjct: 59 VTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIH 118
Query: 432 PQTIIAGWRIASDASKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFT 611
PQ II G+RIA+ + AL +S D+ + A R DLENIARTTLSSKILS +K HF
Sbjct: 119 PQVIIDGYRIATKTAIDALRASSIDNSS--DPAKFRSDLENIARTTLSSKILSQNKNHFA 176
Query: 612 KLAVDAVLRLKGSGN 656
+LAVDAVLRLKGS N
Sbjct: 177 QLAVDAVLRLKGSTN 191
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 134 bits (323), Expect = 1e-32
Identities = 71/174 (40%), Positives = 112/174 (64%)
Frame = +3
Query: 135 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 314
R + + AI ++VKS+LGP G+DK+LV + G V VTNDGATIL + V++PA K+
Sbjct: 23 RNQNVLATTAIANVVKSSLGPVGLDKMLVD---DIGDVTVTNDGATILSLLDVEHPAGKV 79
Query: 315 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDASKQALAE 494
LV++++ QD+EVGDGTTSV + +L++ K+HP TII G+R+A + + + +
Sbjct: 80 LVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTD 139
Query: 495 ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN 656
+L + S L N+A+T++SSKI+ N + F+ +AVDA+L +K S +
Sbjct: 140 VLSCSVDSLGKES----LINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNS 189
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 120 bits (290), Expect = 1e-28
Identities = 67/186 (36%), Positives = 104/186 (55%)
Frame = +3
Query: 84 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTND 263
P+ +LK +S+ +A+ D +++TLGP G DK++V + G+V ++ND
Sbjct: 9 PVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVD---DRGEVVISND 65
Query: 264 GATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTI 443
GATI+K + + +PAAK LVD+++ QD EVGDGTTSV V +E + I
Sbjct: 66 GATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLI 125
Query: 444 IAGWRIASDASKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAV 623
I G+R A+ + + E + H +E LR L A T ++SK++ ++ FTK+ V
Sbjct: 126 IRGYRKAAQLAVNKIKEIAI-HLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVV 184
Query: 624 DAVLRL 641
DAVL L
Sbjct: 185 DAVLTL 190
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 118 bits (283), Expect = 1e-27
Identities = 66/169 (39%), Positives = 105/169 (62%)
Frame = +3
Query: 135 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 314
R+S+ + A ++ D ++++LGPKGMDK ++ G+ G+V +TNDGATILK + V +PAAK+
Sbjct: 21 RLSNIMAARSVADAIRTSLGPKGMDK-MIQTGK--GEVILTNDGATILKHLSVLHPAAKM 77
Query: 315 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDASKQALAE 494
LVD+S QD E GDGTTSV + KL+++ +HP I ++ A+ + + E
Sbjct: 78 LVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKE 137
Query: 495 ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL 641
+ + + E+ LR A T+L+SKI+S + +AVDAVL++
Sbjct: 138 NALAIELSDRESLLRA-----ATTSLNSKIVSQYSNLLAPIAVDAVLKV 181
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 110 bits (265), Expect = 2e-25
Identities = 64/165 (38%), Positives = 98/165 (59%)
Frame = +3
Query: 141 SSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILV 320
S + + ++V+++LGP+G+DKIL+S G++ VTNDGATIL + V++ AK+LV
Sbjct: 38 SHILATKTVANIVRTSLGPRGLDKILIS---PDGEITVTNDGATILDQMEVEHQIAKLLV 94
Query: 321 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDASKQALAEAS 500
+SK QD+E+GDGTT V V LI++ +HP I G+ A + + L +A
Sbjct: 95 QLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHL-DAI 153
Query: 501 FDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 635
D E + +L A+T+L SK++S +HF +AVDAVL
Sbjct: 154 SDVVDFSPENT--TNLFRSAKTSLGSKVVSKAHDHFANIAVDAVL 196
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 93.9 bits (223), Expect = 2e-20
Identities = 54/192 (28%), Positives = 104/192 (54%)
Frame = +3
Query: 81 NPIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTN 260
+P+ ++ +MS+ A A+ D++++ LGP+ M K+L+ G V +TN
Sbjct: 3 SPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLD---PVGSVLLTN 59
Query: 261 DGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQT 440
DG IL+ I V +PAAK ++++++ QDEEVGDGTTSV + L+++K+HP
Sbjct: 60 DGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVV 119
Query: 441 IIAGWRIASDASKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLA 620
+I ++ A + + + E + N+++ ++ + RT + +K+++ + LA
Sbjct: 120 MIRSFKQALEDALSIIDEITL--PVNVDD---NAEMFRLIRTCIGTKLVARWSDLMCHLA 174
Query: 621 VDAVLRLKGSGN 656
+ AV + + N
Sbjct: 175 LRAVRTVASTSN 186
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 87.0 bits (206), Expect = 2e-18
Identities = 53/163 (32%), Positives = 82/163 (50%)
Frame = +3
Query: 156 AIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKV 335
AI + D++KS LGP G K+LV +G +++T DG +L + + NP A + +
Sbjct: 25 AIGLQDVLKSNLGPTGTTKMLVD---GAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATA 81
Query: 336 QDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDASKQALAEASFDHQK 515
QD+ GDGTTSV + I + LHP I G+ +A + + L D +
Sbjct: 82 QDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEV 141
Query: 516 NLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLK 644
+ R L N+A+T+LS+KI S E VDA+L ++
Sbjct: 142 D------REVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIR 178
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 72.1 bits (169), Expect = 7e-14
Identities = 46/157 (29%), Positives = 79/157 (50%)
Frame = +3
Query: 165 IGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDE 344
+ ++ +++LGP G +KI+V+ + Q +TND ATI++ + V +PAAK++VD ++ Q+
Sbjct: 38 LSEITRTSLGPNGKNKIVVN---HLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQEN 94
Query: 345 EVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDASKQALAEASFDHQKNLN 524
E+GD V V +I L P I G+ +A + + L E D +
Sbjct: 95 ELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICAD---KIE 151
Query: 525 EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 635
+L RT +SSK N ++ + L A+L
Sbjct: 152 TVESEKELIKAIRTCISSKQYGN-EDFLSDLVAKAIL 187
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 50.4 bits (115), Expect = 2e-07
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +3
Query: 135 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGV----DNP 302
R S G + V TLGPKG + ++ + G ++T DG T+ +S+ + +N
Sbjct: 44 RASLLTGVDTLARAVSVTLGPKGRNVLI---DQPFGSPKITKDGVTVARSVSLKDKFENL 100
Query: 303 AAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASD 470
A+++ D++ +E GDGTT+ TV + + +P + G ++A D
Sbjct: 101 GARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVD 156
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 144 WTSGQLQLSPLLLHF*G 94
WT GQL LSP +L+F G
Sbjct: 311 WTQGQLWLSPRVLYFLG 327
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 557 RTDHTELKDPFKSQRAFHKISS*CSFAFERI 649
+ D +L +P+++ FH S C F F+ +
Sbjct: 105 KVDVAQLVEPYRNDCIFHDASGACHFFFKEV 135
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 25.8 bits (54), Expect = 5.6
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +3
Query: 159 IAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQ 338
IA+ D+ S LG G+ RN G + DG T LKS+GV + K+ VQ
Sbjct: 324 IAVPDV--SQLGIPGVKPEAYRDSRNFGGRDA--DGVTGLKSLGVRDLTYKLSFLACMVQ 379
Query: 339 DEEVGD 356
++ D
Sbjct: 380 PDDAND 385
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +3
Query: 165 IGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSI 287
+G++ LGP I+ +CG ++ V+ A + + I
Sbjct: 757 VGEICMDELGPANSPLIMATCGSKGSKINVSQMVACVGQQI 797
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 289 PIDFNIVAPSFVTST*PEFLPQETKILSIP 200
P+D ++ +P TST PE LP+E S+P
Sbjct: 408 PLDGDVESPH-PTSTMPEALPREPLSFSLP 436
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 236 VPPAGN*DLIHSFGT*STLYQISYGNSTD 150
V P + L+H +G T YQ YG + D
Sbjct: 308 VVPGTSVPLVHDYGASGTGYQAGYGMALD 336
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,471,896
Number of Sequences: 5004
Number of extensions: 45335
Number of successful extensions: 123
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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