Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_C22
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0659 - 5021159-5021266,5021364-5021494,5021619-5021785,502... 33 0.20
08_02_1129 - 24513568-24514296,24515380-24515817 31 0.80
09_04_0579 + 18676165-18676524,18676846-18677058,18677136-186772... 30 1.8
03_02_0037 - 5192935-5192970,5193057-5193140,5193261-5193371,519... 30 1.8
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152... 29 2.4
05_03_0515 + 14930736-14932697 29 2.4
04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260 29 2.4
04_04_0347 + 24564589-24565296 29 2.4
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 3.2
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 28 5.6
06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255 28 5.6
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369... 28 5.6
02_02_0231 - 8091431-8092900 28 5.6
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 28 5.6
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 28 7.4
02_04_0029 + 19036176-19036481,19036602-19036733,19036814-190369... 28 7.4
07_01_0736 - 5600201-5600374,5600455-5600563,5601075-5601196,560... 27 9.8
02_04_0392 - 22578488-22578811,22578895-22578900 27 9.8
01_06_0535 + 30061862-30063388 27 9.8
>01_01_0659 -
5021159-5021266,5021364-5021494,5021619-5021785,
5021950-5022065,5022226-5022381,5022570-5022678,
5023153-5023262,5023807-5023992,5024077-5024667
Length = 557
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 243 KFPSIINEGRVEGDKYQISIHLPGYEQKDINVK 341
K ++ E +VEGD Y + +H PG+ K ++V+
Sbjct: 216 KDDEVVKEEKVEGDGYSLGLHAPGFFDKVLHVE 248
>08_02_1129 - 24513568-24514296,24515380-24515817
Length = 388
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 624 SSGLSPSRRQRPARCSRW*TPSLHDLHS*RSSQWALQLASC 502
+S +SP QR A CSRW PS L + + A+QL C
Sbjct: 259 ASAVSPPAEQRAACCSRWWVPSSLSLVASLALAAAVQLRVC 299
>09_04_0579 +
18676165-18676524,18676846-18677058,18677136-18677288,
18677503-18677622,18677696-18677782,18677876-18678313
Length = 456
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 502 ARGQLQSPLRRPLRM*VVKRWSSPPRATCGTLTSAWRQPRRPMR 633
A G+ P P V SS PR C LTS +R+P P R
Sbjct: 5 AVGEATPPPGGPPSRVSVSSSSSTPRRRCAALTSRFREPASPRR 48
>03_02_0037 -
5192935-5192970,5193057-5193140,5193261-5193371,
5193460-5193834
Length = 201
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +2
Query: 68 AAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLWSNLANEMQHLGQHDEGAVVEV 247
++ S +HG + PY+H D +S E L S S+ + G +D+GA
Sbjct: 24 SSYSCGTARFHGKAQQPYYHCD-YSEDAEEDDLSMISDASSGPRQQCSTG-NDDGAAAAA 81
Query: 248 PQHYKRRTRGRR 283
R RGRR
Sbjct: 82 AHANAARRRGRR 93
>11_06_0645 -
25814302-25814759,25814853-25815005,25815032-25815214,
25815342-25815531,25815624-25815784,25816136-25816623,
25817035-25817075
Length = 557
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 255 IINEGRVEGDKYQISIHLPGYEQKDINVKAKNGVLMVQANSAFNHYLKIQNLP 413
I ++G++EG + I H+P E D+ V + + + +S H K N P
Sbjct: 351 ISSKGQLEGIQVVIDPHVPSVESVDMPVSSMDNSTLEVFSSQQQHSFKCNNTP 403
>05_03_0515 + 14930736-14932697
Length = 653
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 41 IALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESM-LDTHSLWSNLANEMQHL 214
+ L +C + V +P + +W YH + YV +S+ ++ S WSN + L
Sbjct: 308 LCLEVCAIFFMVMMSPWTWASLQYWKYHRLADAAWYVFKSLQTESMSWWSNSLGQYNFL 366
>04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260
Length = 456
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 167 DTHSLWSNLANEMQHLGQHDEGAVVEVP 250
D S+W N E+ LG HD AV++ P
Sbjct: 134 DKRSIWFNAPVEVDRLGLHDYHAVIKCP 161
>04_04_0347 + 24564589-24565296
Length = 235
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 38 MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDPF 139
M L+ LLAA SAA +H ++ PY HH+ P+
Sbjct: 5 MSMLLASSLLAAASAARADHHSPAYAPYPHHHAPW 39
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 486 KQPEDSKRPVAEPTETTSTNVSREEMEFTTESNVRD 593
+QP SKRP AE T TT++ ++ +E ++ VRD
Sbjct: 696 EQPHRSKRPWAETTTTTTSGRDQDHLEALYDA-VRD 730
>09_04_0512 + 18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 176 SLWSNLANEMQHLGQHDEGAVVEVPQH-YKRRTRGRRQVSDIYSPAWLRTERHQRESEKW 352
S++ + NE+ H G + P++ T+ R++SD P RTE H R
Sbjct: 1225 SIFLDTGNELNHQTDLINGHANDKPKNSLAASTKRERKISDSLHPRLRRTELHNRNGRHQ 1284
Query: 353 S 355
S
Sbjct: 1285 S 1285
>06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255
Length = 863
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +2
Query: 14 RVVERSTRMIALVLCGLLAAVSAAPQYY---HGSSHWPYHHYDPFSPYVRESMLDTHSLW 184
RVVE RM+++V C L + A Q Y G P ++E +L+ +
Sbjct: 126 RVVEHGVRMVSIVGCAGLGKTTLAKQVYDKIKGEFECKAFVSVSQKPNIKELILNISNQV 185
Query: 185 SNLANEMQHLGQHDEGAVVEVPQHYKRRTRGRRQVSDIYSP 307
N + M D +V+ + Y ++ R V DI++P
Sbjct: 186 GNKSTNM----SDDVANLVDNLREYLKQKRYIVVVDDIWNP 222
>05_03_0626 -
16335816-16335917,16336331-16336558,16336694-16336973,
16337596-16338560
Length = 524
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 559 RWSSPPRATCGTLTSAWRQPRRPMR 633
RW+ PP C T S + P RP R
Sbjct: 120 RWAPPPAPRCSTPLSPYSPPFRPAR 144
>02_02_0231 - 8091431-8092900
Length = 489
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 197 NEMQHLGQHDEGAVVEVPQHYKRRTRGRRQVSDIYSP 307
N+ G HDE + VP + RTRGR ++P
Sbjct: 324 NDAHRNGGHDEDPLAWVPDGFLERTRGRGLAVAAWAP 360
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = +2
Query: 20 VERSTRMIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLWSNLAN 199
V T ++ L++C +L ++ + G++ + D SP+ D ++ WS+ +N
Sbjct: 75 VSNKTVIVTLLVCVILTTIA-----FLGTTAYYLRRKDALSPHSHAYSFDKYTSWSSRSN 129
Query: 200 EMQH 211
+ H
Sbjct: 130 LVSH 133
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 27.9 bits (59), Expect = 7.4
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 19/91 (20%)
Frame = +3
Query: 309 PGY-EQKDINVKAKNGVLMVQANSAFNH----YLKIQNLPWD------------VNSEGS 437
PGY E ++ +N +++ +AN+ FN YL +++ W +E
Sbjct: 525 PGYYEDGSFGIRLENVLIVKEANTKFNFGDKGYLAFEHITWTPYQTKLIDTTLLTPAEIE 584
Query: 438 WV--YEKDVLKITFPLKQKQPEDSKRPVAEP 524
WV Y D KI P +Q ++ R EP
Sbjct: 585 WVNAYHSDCRKILQPYLNEQEKEWLRKATEP 615
>02_04_0029 +
19036176-19036481,19036602-19036733,19036814-19036933,
19037763-19037837,19038282-19038392,19038528-19038635,
19038865-19038933,19038934-19039004,19039095-19039147,
19039223-19039326,19039424-19039696
Length = 473
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 WSNLANEMQHLGQHDEGAVVEVPQHYKRRTRGRRQVS 292
+SNL + Q L QH + + P+HY R+ RR +S
Sbjct: 197 FSNLKYKQQPLVQHQKIPLASAPEHYGLRSGLRRIMS 233
>07_01_0736 -
5600201-5600374,5600455-5600563,5601075-5601196,
5602859-5602935,5603349-5603487,5604306-5604618,
5605084-5605394,5607245-5609141,5609239-5609374,
5609519-5609607,5610424-5610507,5611112-5611191,
5611312-5611446,5612340-5612585
Length = 1303
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -2
Query: 296 YLILVAFHASFVYNAGELQRQLLHHVVPSVAFRWQGWTKANVCPTC 159
Y++ V +SF Y E+Q LH+ V ++ + W N +C
Sbjct: 653 YILGVRSLSSFQYELYEIQHVQLHYEVSCISIPQEDWRLDNSSSSC 698
>02_04_0392 - 22578488-22578811,22578895-22578900
Length = 109
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 86 PQYYHGSSHWPYHHYDPF 139
P YY+ ++PYHHY P+
Sbjct: 91 PPYYY---YYPYHHYSPY 105
>01_06_0535 + 30061862-30063388
Length = 508
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 130 RPLQSLRSGKHVGHTFALVQPCQRN--ATLGTT 222
R LQSLRSG HV ++ + N AT GTT
Sbjct: 281 RILQSLRSGDHVAPVSKIIITSRSNKIATFGTT 313
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,977,887
Number of Sequences: 37544
Number of extensions: 413206
Number of successful extensions: 1334
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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