Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_C20
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0508 + 4424607-4424800,4425067-4425111,4425587-4425677,442...    31   0.94 
10_05_0071 - 8801918-8802235,8802335-8802488,8802701-8802938,880...    28   6.7  

>08_01_0508 +
           4424607-4424800,4425067-4425111,4425587-4425677,
           4425791-4425850,4427031-4427150,4427332-4427583
          Length = 253

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -2

Query: 336 PETHATVIWRNIKRFRSAVNPSNALLLPIELADQFLD---RLAPPSAPLN 196
           PE+HA V+   I+ +R A++    L LP     ++L    ++   S PLN
Sbjct: 94  PESHAAVVKTAIRNYRKAIDEGLLLKLPFTTIFEYLQAKHKIESASGPLN 143


>10_05_0071 -
           8801918-8802235,8802335-8802488,8802701-8802938,
           8803109-8803319,8803391-8803515,8808503-8808622,
           8808728-8809586
          Length = 674

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 29  LFXPRXRQKGIWNPVFPW*HCL*RDLIHLFNSTNVKVRFREEEASEL 169
           LF P  R + IW   +   H   R L++L   +++K+  R+ +AS +
Sbjct: 437 LFDPEKRGQLIWETRYHIIHGTARGLVYLHEDSHIKIIHRDLKASNV 483


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,831,509
Number of Sequences: 37544
Number of extensions: 253721
Number of successful extensions: 523
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)