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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_C20
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ...    69   5e-12
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.       67   2e-11
AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      53   3e-07
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    53   3e-07
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    52   5e-07
AJ278684-2|CAB99192.1|  989|Drosophila melanogaster endonuclease...    50   2e-06
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    42   7e-04
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    41   0.001
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    41   0.002
AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    39   0.006
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    38   0.008
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ...    38   0.014
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ...    36   0.033
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ...    36   0.033
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ...    36   0.033
U02279-1|AAA18301.1|  964|Drosophila melanogaster protein ( Dros...    36   0.057
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ...    36   0.057
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ...    36   0.057
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ...    36   0.057
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ...    35   0.100
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever...    34   0.13 
M38643-2|AAA28940.1|  192|Drosophila melanogaster protein ( D.me...    31   1.2  
AE014134-3392|AAF53993.2|  241|Drosophila melanogaster CG2042-PA...    29   5.0  

>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
           protein.
          Length = 1219

 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = -1

Query: 607 PFMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLS 428
           P +I GDFN  H  WGS  +N  G      +D   L +LN  SPT  +      + IDL+
Sbjct: 125 PSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFS-THNTYTHIDLT 183

Query: 427 ICTPQLASSLSWSTLCSTYNSDHYPIIIS-FP 335
           +C+P LA    W  L   + SDH+PII + FP
Sbjct: 184 LCSPILAPHAKWKILNDLHGSDHFPIITTLFP 215


>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
          Length = 1227

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 33/86 (38%), Positives = 51/86 (59%)
 Frame = -1

Query: 601 MIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSIC 422
           ++ GD NS    WGS  +N+ G ++  ++   SL +LN GSPT L+      + ID+S+ 
Sbjct: 131 ILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLS-THNTFTHIDISLI 189

Query: 421 TPQLASSLSWSTLCSTYNSDHYPIII 344
           +PQ+A   SWS   + + SDH+PI I
Sbjct: 190 SPQIAHMCSWSISDNLHGSDHFPITI 215


>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 27/92 (29%), Positives = 45/92 (48%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSI 425
           F+I GDFNS H +W  + +N +G  L ++ D+    IL    PT +        A  L +
Sbjct: 156 FLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKAKASTLDL 214

Query: 424 CTPQLASSLSWSTLCSTYNSDHYPIIISFP*N 329
           C   + + L+   +    +SDH P++I +  N
Sbjct: 215 CLTNIPNQLANPAVMQELSSDHLPVVIKYSTN 246


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 27/92 (29%), Positives = 45/92 (48%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSI 425
           F+I GDFNS H +W  + +N +G  L ++ D+    IL    PT +        A  L +
Sbjct: 104 FLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKAKASTLDL 162

Query: 424 CTPQLASSLSWSTLCSTYNSDHYPIIISFP*N 329
           C   + + L+   +    +SDH P++I +  N
Sbjct: 163 CLTNIPNQLANPAVMQELSSDHLPVVIKYSTN 194


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p
           protein.
          Length = 906

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLS 428
           +++ GD+N+ H  WG + ++  G EL + L +    IL +GSPTR    P    S ID +
Sbjct: 133 YLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCIDFA 192

Query: 427 ICTPQLASSLSWSTLCSTYNSDHYPIIIS 341
           +    +   L+  T     +SDH P+IIS
Sbjct: 193 V-YHGIPDHLATITQSWDLDSDHLPLIIS 220


>AJ278684-2|CAB99192.1|  989|Drosophila melanogaster
           endonuclease/reverse transcriptase protein.
          Length = 989

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = -1

Query: 610 RPFMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAID 434
           RP +I GD N+  T WGS +SN+ G  ++D +++  L +LN G  PT     G   S ID
Sbjct: 118 RPTVIGGDLNAWATEWGSRISNTRGRAVIDAMNLLDLVLLNDGFKPTFNNDRG--TSFID 175

Query: 433 LSICTPQLASSLSWSTLCSTYNSDH 359
           ++  +  L +  +W        SDH
Sbjct: 176 VTFVSRVLVAGSNWMVHEDITLSDH 200


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLD--ILDMYSLCILNSGSPTRLTKP-GEVISAID 434
           F+  GD+N+ HT WGS + N  G +L    I     L  ++ GSPT       ++   ID
Sbjct: 132 FIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPDLID 191

Query: 433 LSICTPQLASSLSWSTLCSTYNSDHYPIII 344
            ++ T  ++ SL  +      +SDH P++I
Sbjct: 192 FAV-TKNISRSLVKAECLPDLSSDHSPVLI 220


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDM--YSLCILNSGSPTRL-TKPGEVISAID 434
           F+  GD+N+ HT WGS + +  G +L + L      L  ++ G PT     P ++   ID
Sbjct: 131 FIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLID 190

Query: 433 LSICTPQLASSLSWSTLCSTYNSDHYPIIIS 341
            +I T  +  ++  +   +  +SDH P+ ++
Sbjct: 191 FAI-TKHVPRNMVTAEALADLSSDHSPVFLN 220


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDM--YSLCILNSGSPTRL-TKPGEVISAID 434
           F+  GD+N+ HT WGS +    G +L + L      L  ++ G PT     P ++   ID
Sbjct: 131 FIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLID 190

Query: 433 LSICTPQLASSLSWSTLCSTYNSDHYPIIIS 341
            +I T  +  ++  +   +  +SDH P+ ++
Sbjct: 191 FAI-TKHVPRNMVTAEALADLSSDHSPVFLN 220


>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISA-IDLS 428
           F++ GD+N+ H  WG+  SN  G  L +++    +  L +G PTR           ID +
Sbjct: 132 FIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPGYIDFA 191

Query: 427 ICTPQLASSLSWSTLCSTYNSDHYPIIIS 341
           +    L    + S +    +SDH P++I+
Sbjct: 192 LTKGVLGIHANISAVVE-LSSDHLPLVIT 219


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLS 428
           F+  GD+N+ H  WG+  S   G  L +++      +L +G PT  +  P    SA+D  
Sbjct: 133 FIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFF 192

Query: 427 ICTPQLASSLSWSTLCSTYNSDHYPII 347
           I        L   TL    +SDH PI+
Sbjct: 193 ITCGYGMGRLDVQTL-QELSSDHLPIL 218


>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
           protein.
          Length = 1092

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = -1

Query: 601 MIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLS 428
           ++ GD+N+ H  WG   +   G  L D +   S+  I+ +GS T       +  SAID S
Sbjct: 161 ILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFS 220

Query: 427 ICTPQLASSLSWSTLCSTYNSDHYPIII 344
           IC  +L       +  +  +SDH PI++
Sbjct: 221 IC-KRLGRYEKRISSSAHLSSDHLPILL 247


>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
           protein.
          Length = 1103

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N  H  WG+ +S + G  L   IL    L I+ +G  T       +  SA+D 
Sbjct: 152 FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDF 211

Query: 430 SICTPQLASSL-SWSTLCSTYNSDHYPIII 344
           +IC       L ++ST     +SDH PI I
Sbjct: 212 AICKGFHTQKLKTYST--DELSSDHLPIQI 239


>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
           protein.
          Length = 1103

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N  H  WG+ +S + G  L   IL    L I+ +G  T       +  SA+D 
Sbjct: 152 FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDF 211

Query: 430 SICTPQLASSL-SWSTLCSTYNSDHYPIII 344
           +IC       L ++ST     +SDH PI I
Sbjct: 212 AICKGFHTQKLKTYST--DELSSDHLPIQI 239


>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
           protein.
          Length = 1103

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N  H  WG+ +S + G  L   IL    L I+ +G  T       +  SA+D 
Sbjct: 152 FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDF 211

Query: 430 SICTPQLASSL-SWSTLCSTYNSDHYPIII 344
           +IC       L ++ST     +SDH PI I
Sbjct: 212 AICKGFHTQKLKTYST--DELSSDHLPIQI 239


>U02279-1|AAA18301.1|  964|Drosophila melanogaster protein (
           Drosophila melanogastertelomere-associated transposons
           TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
           cds. ).
          Length = 964

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N+ H  WG + +   G  L + +    +  I+ +G  T       +  SAID 
Sbjct: 32  FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 91

Query: 430 SIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 305
           SIC    +L   +S S   +  +SDH PI++    +T    + K
Sbjct: 92  SICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSTLFLQK 132


>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N+ H  WG + +   G  L + +    +  I+ +G  T       +  SAID 
Sbjct: 148 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 207

Query: 430 SIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 305
           SIC    +L   +S S   +  +SDH PI++    +T    + K
Sbjct: 208 SICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSTLFLQK 248


>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
           protein.
          Length = 1042

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N+ H  WG + +   G  L + +    +  I+ +G  T       +  SAID 
Sbjct: 110 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 169

Query: 430 SIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 305
           SIC    +L   +S S   +  +SDH PI++    +T    + K
Sbjct: 170 SICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSNLFLQK 210


>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N+ H  WG + +   G  L + +    +  I+ +G  T       +  SAID 
Sbjct: 148 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 207

Query: 430 SIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 305
           SIC    +L   +S S   +  +SDH PI++    +T    + K
Sbjct: 208 SICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSNLFLQK 248


>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 34.7 bits (76), Expect = 0.100
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N+ H  WG + +   G  L + +    +  I+ +G  T       +  SAID 
Sbjct: 148 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 207

Query: 430 SICTPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 305
           SIC   L       +  +  +SDH PI++    +T    + K
Sbjct: 208 SIC-KGLGRLEKRISSVADLSSDHLPILLEINLDTSTLFLQK 248


>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
           transcriptase protein.
          Length = 1084

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 431
           F++ GD+N+ H  WG + +   G  L + +   S   I+ +G  T       +  SAID 
Sbjct: 148 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDF 207

Query: 430 SICTPQLASSLSWSTLCSTYNSDHYPIII 344
           SIC   L       +  +  +SDH PI++
Sbjct: 208 SIC-KGLGRFEKRISSGADLSSDHLPILL 235


>M38643-2|AAA28940.1|  192|Drosophila melanogaster protein (
           D.melanogaster mobileelement jockey gag-specific protein
           gene, complete cds.).
          Length = 192

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 604 FMIXGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPT 473
           F+  GD+N+ H  WG+  S   G  L +++      +L +G PT
Sbjct: 133 FIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPT 176


>AE014134-3392|AAF53993.2|  241|Drosophila melanogaster CG2042-PA
           protein.
          Length = 241

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -1

Query: 592 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 443
           GD+N+ H  WG+   N  G  L +++    +  L +G P R  +  + ++
Sbjct: 57  GDWNTSHWLWGAERCNRRGRALANLVLSTGMSSLVTGGPKRFQEAVDTLT 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,648,203
Number of Sequences: 53049
Number of extensions: 446256
Number of successful extensions: 946
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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